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Porphyromonas gingivalis

Taxonomy
Taxonomy database identifier: 837
Superkingdom Bacteria
Phylum Bacteroidetes
Order Bacteriodales
Species gingivalis
Family Porphyromonadaceae
Genus Porphyromonas
Peptidase View peptidase sequences from Porphyromonas gingivalis
Count of known and putative peptidases: 77, non-peptidase homologues 24
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0043859 lspA PGN_0515
CA C1 unassigned subfamily C1A unassigned peptidases MER0079311 PG_1788
CA C1 unassigned subfamily C1B unassigned peptidases MER0034581 PGN_0508
CA C2 C02.022 Tpr peptidase (Porphyromonas gingivalis) MER0003195 tpr PG_1055
CA C10 C10.002 PrtT peptidase MER0001723 prtT
CA C10 C10.003 periodontain MER0010975 PG_1427
CA C10 unassigned family C10 unassigned peptidases MER1168661 prtT/prtT_2
CA C10 unassigned family C10 unassigned peptidases MER1168781 pdnA
CA C10 unassigned family C10 unassigned peptidases MER1169461
CA C10 unassigned family C10 unassigned peptidases MER1169480
CA C39 C39.001 bacteriocin-processing peptidase MER0714568 HMPREF1989_02421
CA C39 C39.001 bacteriocin-processing peptidase MER0714762 HMPREF1989_01381
CA C39 C39.001 bacteriocin-processing peptidase MER0248740 PGTDC60_1973
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0713943 A343_2340
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0369040 PGTDC60_1000
CD C25 C25.001 gingipain RgpA MER0001351 rgpA
CD C25 C25.001 gingipain RgpA MER0347480 HMPREF1322_0435
CD C25 C25.001 gingipain RgpA MER0347478 HMPREF1322_1337
CD C25 C25.001 gingipain RgpA MER0002050 prtH
CD C25 C25.002 gingipain K MER0002599 kgp HMPREF1322_0907
CD C25 C25.002 gingipain K MER0247587 kgp
CD C25 C25.003 gingipain RgpB MER0002270 rgpB PG_0506
CD C25 C25.004 PG0026 peptidase (Porphyromonas-type) MER0034582 porU PGN_0022
CD C25 unassigned family C25 unassigned peptidases MER0543039 kgp
CD C25 unassigned family C25 unassigned peptidases MER0622388
CD C25 unassigned family C25 unassigned peptidases MER0676493
CD C25 unassigned family C25 unassigned peptidases MER0639839
CD C25 unassigned family C25 unassigned peptidases MER0626605
CD C25 unassigned family C25 unassigned peptidases MER0640412
CD C25 unassigned family C25 unassigned peptidases MER0666177
CD C25 unassigned family C25 unassigned peptidases MER0657375
CD C25 unassigned family C25 unassigned peptidases MER0646885
CD C25 unassigned family C25 unassigned peptidases MER0653374
CD C25 unassigned family C25 unassigned peptidases MER0637735
CD C25 unassigned family C25 unassigned peptidases MER0368611
CD C25 unassigned family C25 unassigned peptidases MER0427964
CD C25 unassigned family C25 unassigned peptidases MER0432164
CD C25 unassigned family C25 unassigned peptidases MER0541606
CD C25 unassigned family C25 unassigned peptidases MER0570457
CD C25 unassigned family C25 unassigned peptidases MER0471356 HM13 20q11.21
CD C25 unassigned family C25 unassigned peptidases MER0467305
CD C25 unassigned family C25 unassigned peptidases MER0698696
CD C25 unassigned family C25 unassigned peptidases MER0656060
CD C25 unassigned family C25 unassigned peptidases MER0432364
CD C25 unassigned family C25 unassigned peptidases MER0565496
CD C25 unassigned family C25 unassigned peptidases MER0450209
CD C25 unassigned family C25 unassigned peptidases MER0685815
CD C25 unassigned family C25 unassigned peptidases MER0396394
CD C25 unassigned family C25 unassigned peptidases MER0384726
CD C25 unassigned family C25 unassigned peptidases MER0577124
CD C25 unassigned family C25 unassigned peptidases MER0556240 kgp
CD C25 unassigned family C25 unassigned peptidases MER0397881
CD C25 unassigned family C25 unassigned peptidases MER0523497
CD C25 unassigned family C25 unassigned peptidases MER0522702
CD C25 unassigned family C25 unassigned peptidases MER0456564
CD C25 unassigned family C25 unassigned peptidases MER0580660
CD C25 unassigned family C25 unassigned peptidases MER0450257
CD C25 unassigned family C25 unassigned peptidases MER0406701
CD C25 unassigned family C25 unassigned peptidases MER0402168
CD C25 unassigned family C25 unassigned peptidases MER0557211 kgp
CD C25 unassigned family C25 unassigned peptidases MER0468954
CD C25 unassigned family C25 unassigned peptidases MER0586462
CD C25 unassigned family C25 unassigned peptidases MER0484311
CD C25 unassigned family C25 unassigned peptidases MER0570410
CD C25 unassigned family C25 unassigned peptidases MER0477206
CD C25 unassigned family C25 unassigned peptidases MER0546796
CD C25 unassigned family C25 unassigned peptidases MER0661297
CD C25 unassigned family C25 unassigned peptidases MER0397695
CD C25 unassigned family C25 unassigned peptidases MER0652086
CD C25 unassigned family C25 unassigned peptidases MER0399549
CD C25 unassigned family C25 unassigned peptidases MER0002095 cpgR HMPREF1322_1210
CD C25 unassigned family C25 unassigned peptidases MER0712489 PG_0410
CD C25 unassigned family C25 unassigned peptidases MER0427969 prtRII_2
CD C25 unassigned family C25 unassigned peptidases MER0350605
CD C25 unassigned family C25 unassigned peptidases MER0693518
CD C25 unassigned family C25 unassigned peptidases MER0363819
CD C25 unassigned family C25 unassigned peptidases MER0365414
CD C25 unassigned family C25 unassigned peptidases MER0550397
CD C25 unassigned family C25 unassigned peptidases MER0390316
CD C25 unassigned family C25 unassigned peptidases MER0364644
CD C25 unassigned family C25 unassigned peptidases MER0551279
CD C25 unassigned family C25 unassigned peptidases MER0660408
CD C25 unassigned family C25 unassigned peptidases MER0566234
CD C25 unassigned family C25 unassigned peptidases MER0562927
CD C25 unassigned family C25 unassigned peptidases MER0566369
CD C25 unassigned family C25 unassigned peptidases MER0361943
CD C25 unassigned family C25 unassigned peptidases MER0353058
CD C25 unassigned family C25 unassigned peptidases MER0552713
CO C40 unassigned family C40 unassigned peptidases MER0034583 PGN_0754
CO C40 unassigned family C40 unassigned peptidases MER0002453 orf202 PG_0740
G- G5 G05.A04 At3g26085 (Arabidopsis thaliana) MER0110435 PGN_1454
MA M3 unassigned subfamily M3A unassigned peptidases MER0034589 PGN_1776
MA M3 unassigned subfamily M3A unassigned peptidases MER0034588 PGN_0788
MA M12 unassigned subfamily M12A unassigned peptidases MER1214720
MA M13 M13.017 oligopeptidase O (Porphyromonas gingivalis) MER1225061
MA M13 M13.017 oligopeptidase O (Porphyromonas gingivalis) MER0004775 pepO
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0034607 ftsH PG_0047
MA M48 unassigned subfamily M48C unassigned peptidases MER0034608 PGN_2064
MA M49 M49.003 dipeptidyl-peptidase IIIB (Bacteroides thetaiotaomicron-type) MER0034609 PGN_1645
MA M56 unassigned family M56 unassigned peptidases MER0034611 PGN_1275
MA M97 unassigned family M97 unassigned peptidases MER0494890
MC M14 M14.023 CPG70 carboxypeptidase (Porphyromonas gingivalis) MER1235708
MC M14 M14.023 CPG70 carboxypeptidase (Porphyromonas gingivalis) MER0013471 PGN_0335
MD M15 unassigned subfamily M15D unassigned peptidases MER0034590 ddpX PGN_0461
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0112354 PG_0196
ME M16 unassigned subfamily M16B unassigned peptidases MER0005519 PG_0196
ME M16 unassigned subfamily M16B unassigned peptidases MER0034591 PGN_2035
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0034602 PGN_1050
MG M24 unassigned subfamily M24A unassigned peptidases MER0034601 map PG_1917
MG M24 unassigned subfamily M24B unassigned peptidases MER0034603 PG_1210
MH M20 M20.003 peptidase T MER0034594 pepT PG_0445
MH M20 M20.012 Pep581 peptidase MER0034596 pepD-1/pepD_2 PG_0137
MH M20 M20.012 Pep581 peptidase MER0034595 pepD-2 PG_0537
MH M20 non-peptidase homologue subfamily M20C non-peptidase homologues MER0787726
MH M20 unassigned subfamily M20F unassigned peptidases MER0034593 PG_0561
MH M28 non-peptidase homologue subfamily M28C non-peptidase homologues MER0197949 PGTDC60_1267
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0034604 PG_2157
MJ M19 unassigned family M19 unassigned peptidases MER0034592 PG_1701
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0034605 PGN_1027
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0111461 mtaD PGN_1411
MJ M38 unassigned family M38 unassigned peptidases MER0034606 hutI PG_0328
MM M50 unassigned family M50 unassigned peptidases MER0034610 PGN_1582
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0034599 PGN_0993
MO M23 unassigned subfamily M23B unassigned peptidases MER0034600 PG_2192
PA S1 S01.527 pepK (Porphyromonas gingivalis) MER0054461 pepK PG_0553
PA S1 unassigned subfamily S1C unassigned peptidases MER0217506 PG_0840
PA S1 unassigned subfamily S1C unassigned peptidases MER0034612 htrA PGN_0637
PA S1 unassigned subfamily S1C unassigned peptidases MER0900148 HMPREF1555_01184/SJDPG2_06575
PA S46 S46.001 dipeptidyl-peptidase 7 (Porphyromonas gingivalis-type) MER0014366 PG_0491
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0034628 dpp11 PGN_0607
PB C44 unassigned family C44 unassigned peptidases MER0034584 PGN_1445
PB C69 unassigned family C69 unassigned peptidases MER0034587 PG_1313
PC C26 C26.957 GMP synthase MER0043858 guaA PG_0589
PC C26 C26.964 CTP synthetase MER0110467 pyrG PGTDC60_1644
PC C26 unassigned family C26 unassigned peptidases MER0111671 PGN_0747
PC C26 unassigned family C26 unassigned peptidases MER0111439 carA PGN_1444
PC C26 unassigned family C26 unassigned peptidases MER0034632 PG_1701
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0109983 PGN_1666
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0034585 PGN_0675
PC S51 unassigned family S51 unassigned peptidases MER1357185
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0982830 HMPREF1555_01048
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0975116 HMPREF1555_00592
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0004211 dp/dpp/DPP IV/dppIV/HMPREF1555_00857 PGTDC60_1620
SC S9 S09.017 prolyl tripeptidyl peptidase MER0005196 ptpA PG_1361
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0034615 PGN_0756
SC S9 unassigned subfamily S9B unassigned peptidases MER1297024
SC S9 unassigned subfamily S9B unassigned peptidases MER1021774 HMPREF1/HMPREF1989_00134/SJDPG2_00760
SC S9 unassigned subfamily S9C unassigned peptidases MER1304186
SC S9 unassigned subfamily S9C unassigned peptidases MER0034613 PGN_1694
SC S9 unassigned subfamily S9C unassigned peptidases MER0034614 PGN_1349
SC S9 unassigned family S9 unassigned peptidases MER0110015 PGN_1542
SC S9 unassigned family S9 unassigned peptidases MER0109588 PGN_1878
SC S10 non-peptidase homologue family S10 non-peptidase homologues MER0945796 A343_0044
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1024786 PMI06_009005
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019665 A343_0123
SE S12 unassigned family S12 unassigned peptidases MER0034616 PG_0011
SE S12 unassigned family S12 unassigned peptidases MER1003267 SJDPG2_08860
SE S13 unassigned family S13 unassigned peptidases MER0034617 PGN_0896
SF S24 S24.003 UmuD protein MER0034622 umuD PGN_1126
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0034623 PG_2000
SF S26 unassigned subfamily S26A unassigned peptidases MER0034624 lepB PG_2001
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0034620 PGN_0330
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0109771 PGN_1708
SJ S16 unassigned family S16 unassigned peptidases MER0034621 lon PGN_0662
SK S14 S14.001 peptidase Clp (type 1) MER0034618 clpP PGN_1549
SK S41 S41.004 C-terminal processing peptidase-3 MER0034625 PGN_0340
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0054462 PGN_0470
SK S41 unassigned subfamily S41A unassigned peptidases MER0034627 PG_1060
SK S41 unassigned subfamily S41A unassigned peptidases MER0034626 PG_1855
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1069447 HMPREF1555_02306
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1068988 A343_1895
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1066097 SJDPG2_02350
SK S49 unassigned subfamily S49A unassigned peptidases MER1346301 sppA
SK S49 unassigned subfamily S49B unassigned peptidases MER0034629 sppA PG_0639
ST S54 S54.025 At5g25752 rhomboid peptidase MER0034630 PGN_0883
ST S54 unassigned family S54 unassigned peptidases MER0034631 PGN_0882
U- U32 U32.001 collagenase (Porphyromonas-type) MER0039180 prtC PGN_0567
U- U32 U32.001 collagenase (Porphyromonas-type) MER0003242 prtC
U- U32 U32.003 collagenase (Salmonella-type) MER0006136 prtQ PGN_0780

GENOME ANALYSIS: Comparison with 14 completely sequenced genomes from genus Porphyromonas
Family Comment
A8 significant presence (1 homologues)
C2 significant presence (1 homologues)
C10 lineage specific expansion (6 homologues)
C25 lineage specific expansion (73 homologues)
C26 lineage specific expansion (5 homologues)
C39 significant presence (5 homologues)
C44 significant presence (1 homologues)
G5 significant presence (1 homologues)
M12 significant presence (1 homologues)
M14 significant presence (2 homologues)
M15 significant presence (1 homologues)
M19 significant presence (1 homologues)
M20 lineage specific expansion (5 homologues)
M28 significant presence (2 homologues)
M48 significant presence (1 homologues)
M49 significant presence (1 homologues)
M97 significant presence (1 homologues)
S1 significant decrease in homologues (4 homologues)
S8 significant presence (2 homologues)
S9 lineage specific expansion (10 homologues)
S10 significant presence (1 homologues)
S12 significant presence (2 homologues)
S15 significant presence (2 homologues)
S24 significant presence (1 homologues)
S41 lineage specific expansion (4 homologues)
S49 lineage specific expansion (5 homologues)
S51 significant presence (1 homologues)

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