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Zymomonas mobilis

Taxonomy
Taxonomy database identifier: 542
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Species mobilis
Family Sphingomonadaceae
Genus Zymomonas
Peptidase View peptidase sequences from Zymomonas mobilis
Count of known and putative peptidases: 124, non-peptidase homologues 51
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0014043 lspA ZMO0324
AC A8 unassigned family A8 unassigned peptidases MER0251381 lspA Zymop_0866
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0251190 Zymop_0457
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0041822 Zmob_0486
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0301425 Zymop_1625
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0298577 Zmob_1663
MA M1 unassigned family M1 unassigned peptidases MER0251539 Zymop_1346
MA M13 unassigned family M13 unassigned peptidases MER0251601 Zymop_0517
MA M13 unassigned family M13 unassigned peptidases MER0041826 ZMO0722
MA M41 M41.001 FtsH peptidase MER0042316 ftsH Za10_1558
MA M41 M41.001 FtsH peptidase MER0252574 ftsH Zymop_1456
MA M48 unassigned family M48 unassigned peptidases MER0251692 Zymop_0977
MA M48 unassigned family M48 unassigned peptidases MER0042413 ZMO0192
MA M61 M61.001 glycyl aminopeptidase MER0014497 Za10_1618
MA M61 M61.001 glycyl aminopeptidase MER0251678 Zymop_1515
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0038691 ZMO1242
MC M14 unassigned subfamily M14D unassigned peptidases MER0250606 Zymop_0070
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0251392 Zymop_0860
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0042067 Za10_0902
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0252123 Zymop_1643
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0252800 Zymop_1644
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0252801 Zymop_1644
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0041827 Za10_1766
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0194698
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0252124 Zymop_1643
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0386799 ZZ6_1259
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470071 Zmob_1685
ME M16 unassigned subfamily M16B unassigned peptidases MER0828126
ME M16 unassigned subfamily M16B unassigned peptidases MER0041828 Za10_1765
ME M16 unassigned subfamily M16B unassigned peptidases MER0252066 Zymop_1230
ME M16 unassigned subfamily M16B unassigned peptidases MER0470072 Zmob_1685
ME M16 unassigned subfamily M16B unassigned peptidases MER0041829 ZMO1890
MF M17 unassigned family M17 unassigned peptidases MER0251238 pepA Zymop_0030
MF M17 unassigned family M17 unassigned peptidases MER0251524 Zymop_0456
MF M17 unassigned family M17 unassigned peptidases MER0041831 Za10_0479
MF M17 unassigned family M17 unassigned peptidases MER0041830 pepA Zmob_0040
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0005654 map ZMO1348
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0251272 map Zymop_0009
MG M24 M24.009 aminopeptidase P1 MER0252015 Zymop_0726
MG M24 M24.009 aminopeptidase P1 MER0041835 Zmob_1017
MH M20 unassigned subfamily M20A unassigned peptidases MER0026420 dapE ZMO1632
MH M20 unassigned subfamily M20A unassigned peptidases MER0251852 dapE Zymop_1481
MH M20 unassigned subfamily M20A unassigned peptidases MER0041832 Za10_0608
MH M20 unassigned family M20D unassigned peptidases MER0015348 Zmob_0863
MH M20 unassigned family M20D unassigned peptidases MER0474178
MH M20 unassigned family M20 unassigned peptidases MER0251654 Zymop_0572
MH M28 unassigned subfamily M28E unassigned peptidases MER1249954
MH M28 unassigned subfamily M28E unassigned peptidases MER0042654 ZZ6_1060
MH M28 unassigned family M28 unassigned peptidases MER0251276 Zymop_1055
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0194669 Za10_0491
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0250867 Zymop_0329
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042704 Za10_0339
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042296 Za10_1530
MJ M38 unassigned family M38 unassigned peptidases MER0042792 Za10_0359
MM M50 unassigned family M50 unassigned peptidases MER0017298 Za10_0177
MO M23 M23.009 Mername-AA292 peptidase MER0252643 Zymop_0949
MO M23 M23.009 Mername-AA292 peptidase MER0252417 Zymop_1663
MO M23 M23.009 Mername-AA292 peptidase MER0042203 Za10_0996
MO M23 M23.009 Mername-AA292 peptidase MER0042204 ZMO1403
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0005916 Za10_0318
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389460 Za10_0318
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0252461 Zymop_0293
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0194694 Za10_1552
MP M67 unassigned subfamily M67B unassigned peptidases MER0048405 Za10_0525
MP M67 unassigned subfamily M67B unassigned peptidases MER0252415 Zymop_0493
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0252641 Zymop_0853
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0041863 Za10_0894
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0016241 pmbA
MU M103 M103.UNW family M103 non-peptidase homologues MER0251749 Zymop_0161
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0250744 Zymop_0580
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405401 ZZ6_0629
PA S1 S01.273 DegP peptidase MER0042657 ZZ6_0980
PA S1 unassigned subfamily S1A unassigned peptidases MER0194697 Za10_1717
PA S1 unassigned subfamily S1B unassigned peptidases MER0406922 Zymop_0936
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0012194 Za10_1650
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0057499 Zmob_0208
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0251552 glmS Zymop_1066
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455587 glmS Zmob_0760
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041940 Za10_1132
PB T1 T01.006 HslV component of HslUV peptidase MER0042524 hslV Za10_0971
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0251348 Zymop_1677
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0041860 Za10_1798
PC C26 C26.954 carA protein MER0041819 Za10_1598
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0250944 Zymop_0969
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0252312 Zymop_1133
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0041820 Za10_1085
PC C26 C26.957 GMP synthase MER0251195 guaA Zymop_0058
PC C26 C26.959 TRP3 protein MER0041821 Zmob_0638
PC C26 C26.964 CTP synthetase MER0194674 pyrG Zymop_0753
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0041818 guaA Zmob_0076
PC C26 unassigned family C26 unassigned peptidases MER0194693 Za10_1383
PC C26 unassigned family C26 unassigned peptidases MER0194696 hisH Zmob_1619
PC C26 unassigned family C26 unassigned peptidases MER0250900 carA Zymop_1493
PC C26 unassigned family C26 unassigned peptidases MER0446839 hisH Zymop_1593
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172975 Za10_1672
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0194665 Za10_0369
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0250762 Zymop_0339
PE T5 T05.001 ornithine acetyltransferase precursor MER0251120 argJ Zymop_0345
PE T5 T05.001 ornithine acetyltransferase precursor MER0042562 argJ Za10_0375
SB S8 unassigned subfamily S8A unassigned peptidases MER0194689 Za10_1295
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0041840 ZMO1408
SC S9 S09.010 oligopeptidase B MER0251835 Zymop_0727
SC S9 S09.010 oligopeptidase B MER0041836 Zmob_1016
SC S9 S09.023 D230019K24Rik peptidase (Mus musculus) MER0252793 Zymop_0483
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0194663 Za10_0284
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0194684 Za10_1182
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0057500 Za10_0006
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0041837 Za10_1630
SC S9 unassigned subfamily S9A unassigned peptidases MER0041839 Zmob_0496
SC S9 unassigned subfamily S9B unassigned peptidases MER0250632 Zymop_0535
SC S9 unassigned subfamily S9B unassigned peptidases MER0251015 Zymop_1658
SC S9 unassigned subfamily S9B unassigned peptidases MER0041841 Zmob_0582
SC S9 unassigned subfamily S9C unassigned peptidases MER0035728 Za10_1893
SC S9 unassigned family S9 unassigned peptidases MER0381851 ZZ6_1674
SC S9 unassigned family S9 unassigned peptidases MER0041842 Za10_0515
SC S10 unassigned family S10 unassigned peptidases MER0041843 Za10_0311
SC S10 unassigned family S10 unassigned peptidases MER0251611 Zymop_0041
SC S10 unassigned family S10 unassigned peptidases MER0251644 Zymop_0286
SC S10 unassigned family S10 unassigned peptidases MER0041844 ZMO1291
SC S15 unassigned family S15 unassigned peptidases MER0044827 Za10_0160
SC S33 unassigned family S33 unassigned peptidases MER0194687 Za10_1227
SC S33 unassigned family S33 unassigned peptidases MER0041855 Za10_1726
SC S33 unassigned family S33 unassigned peptidases MER0041854 ZMO0053
SC S33 unassigned family S33 unassigned peptidases MER0041853 metX Za10_0989
SC S33 unassigned family S33 unassigned peptidases MER0041856 Za10_1781
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0194685 Za10_1202
SE S11 unassigned family S11 unassigned peptidases MER0949025 blaTEM-1
SE S11 unassigned family S11 unassigned peptidases MER0041845 Za10_0229
SE S12 S12.950 esterase EstB MER0017060 ZMO1650
SE S12 S12.950 esterase EstB MER0250945 Zymop_0373
SE S12 S12.950 esterase EstB MER0252861 Zymop_1465
SE S12 S12.950 esterase EstB MER0041847 ZZ6_0405
SE S12 unassigned family S12 unassigned peptidases MER0041846 Za10_1095
SE S12 unassigned family S12 unassigned peptidases MER0252465 Zymop_1122
SF S24 S24.001 repressor LexA MER0251399 lexA Zymop_0971
SF S24 S24.001 repressor LexA MER0041850 lexA ZMO0199
SF S26 S26.001 signal peptidase I MER0251384 Zymop_1407
SF S26 S26.001 signal peptidase I MER0041851 ZMO1710
SF S26 S26.014 TraF peptidase MER0194688 Za10_1287
SF S26 S26.014 TraF peptidase MER0194690 Za10_1345
SF S26 S26.014 TraF peptidase MER0041852 ZMO1941
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0277276 ZZM4_0035
SJ S16 S16.001 Lon-A peptidase MER0006062 lon Zmob_0916
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0250810 Zymop_0630
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0041849 Za10_0668
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0194695 Za10_1593
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0251743 Zymop_1487
SK S14 S14.001 peptidase Clp (type 1) MER0041848 clpP ZMO0948
SK S14 S14.001 peptidase Clp (type 1) MER0358053 clpP ZZ6_0355
SK S41 unassigned subfamily S41A unassigned peptidases MER0041857 Za10_1551
SK S41 unassigned subfamily S41A unassigned peptidases MER0252120 Zymop_1449
SK S49 unassigned subfamily S49B unassigned peptidases MER0251268 Zymop_1194
SK S49 unassigned subfamily S49B unassigned peptidases MER0399485 ZZ6_1223
SK S49 unassigned subfamily S49C unassigned peptidases MER0041858 Zmob_1240
SO S74 unassigned family S74 unassigned peptidases MER0183422 ZMO0399
SO S74 unassigned family S74 unassigned peptidases MER0322735 Zymop_0807
ST S54 unassigned family S54 unassigned peptidases MER0041859 Za10_1601
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0251624 Zymop_1196
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0041862 Za10_1219
U- U32 unassigned family U32 unassigned peptidases MER0041861 Zymop_1195

GENOME ANALYSIS: Comparison with 60 completely sequenced genomes from family Sphingomonadaceae
Family Comment
C26 lineage specific expansion (12 homologues)
C40 significant presence (2 homologues)
M1 significant decrease in homologues (1 homologues)
M103 lineage specific expansion (4 homologues)
M15 significant presence (2 homologues)
M16 lineage specific expansion (13 homologues)
M17 lineage specific expansion (4 homologues)
M23 lineage specific expansion (8 homologues)
P1 significant presence (2 homologues)
S54 significant presence (1 homologues)
S73 significant presence (1 homologues)
S74 significant presence (2 homologues)
U32 significant presence (3 homologues)

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