Shewanella putrefaciens

Taxonomy
Taxonomy database identifier: 24
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Genus Shewanella
Species putrefaciens
Peptidase View peptidase sequences from Shewanella putrefaciens
Count of known and putative peptidases: 138, non-peptidase homologues 37
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 unassigned family A39 unassigned peptidases MER1368252
AA A1 unassigned subfamily A1A unassigned peptidases MER0168116 Sputcn32_2731
AC A8 A08.001 signal peptidase II MER0076300 lspA3 Sputcn32_1060
AC A8 unassigned family A8 unassigned peptidases MER0076299 lspA1 Sputcn32_0222
AD A24 A24.001 type 4 prepilin peptidase 1 MER0075921 Sputcn32_3425
AE A31 unassigned family A31 unassigned peptidases MER0096884 Sputcn32_2091
CA C39 C39.005 colicin V processing peptidase MER0136874 Sput200_3538
CA C51 unassigned family C51 unassigned peptidases MER0241466 Sputcn32_0405
CA C93 unassigned family C93 unassigned peptidases MER0394210 Sput200_3609
CL C60 unassigned subfamily C60A unassigned peptidases MER0096864 Sputcn32_1740
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0461793 Sput200_2308
CL C82 unassigned subfamily C82B unassigned peptidases MER0096936 Sput200_3183/Sputcn32_3074 Sputcn32_3074
CO C40 C40.004 spr peptidase MER0096801 Sputcn32_0052
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0349362 Sput200_3444
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0090919 Sputcn32_2201
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0096896 Sputcn32_2314
MA M1 unassigned family M1 unassigned peptidases MER0090932 Sputcn32_1299
MA M1 unassigned family M1 unassigned peptidases MER0096853 Sputcn32_1453
MA M1 unassigned family M1 unassigned peptidases MER0090930 Sputcn32_3016
MA M3 M03.004 oligopeptidase A MER0093400 Sputcn32_0087
MA M3 unassigned subfamily M3A unassigned peptidases MER0090921 Sputcn32_1612
MA M3 unassigned subfamily M3A unassigned peptidases MER0090777 Sputcn32_2508
MA M6 unassigned family M6 unassigned peptidases MER1196675
MA M6 unassigned family M6 unassigned peptidases MER1196649
MA M6 unassigned family M6 unassigned peptidases MER0089483 Sputcn32_0125
MA M9 unassigned subfamily M9A unassigned peptidases MER1201884
MA M13 unassigned family M13 unassigned peptidases MER1226446
MA M13 unassigned family M13 unassigned peptidases MER0090097 Sputcn32_3412
MA M13 unassigned family M13 unassigned peptidases MER0090055 Sputcn32_0791
MA M32 unassigned family M32 unassigned peptidases MER1261093
MA M32 unassigned family M32 unassigned peptidases MER1261036
MA M41 M41.001 FtsH peptidase MER0096926 ftsH Sput200_2984
MA M48 M48.002 HtpX peptidase MER0096897 htpX Sputcn32_2334
MA M48 M48.018 Oma1 peptidase MER0096929 Sputcn32_2943
MA M48 M48.023 BepA (Escherichia coli) MER0096862 Sputcn32_1695
MA M48 non-peptidase homologue subfamily M48B non-peptidase homologues MER0886553 Sput200_0745/Sputcn32_3998 Sputcn32_3998
MA M48 unassigned subfamily M48B unassigned peptidases MER0096804 Sputcn32_0107
MA M56 unassigned family M56 unassigned peptidases MER0096956 Sput200_0745/Sputcn32_3998 Sputcn32_3998
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0096860 Sput200_1672 Sputcn32_1653
MA M61 unassigned family M61 unassigned peptidases MER0096847 Sputcn32_1653 Sput200_1299
MA M90 unassigned family M90 unassigned peptidases MER0228757 Sput200_2809
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0096878 Sput200_2048
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0468956 Sputcn32_0143
MC M14 unassigned subfamily M14D unassigned peptidases MER0309105 Sput200_2048
MD M15 unassigned family M15 unassigned peptidases MER0096890 Sputcn32_2124
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0094344 Sputcn32_3262
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0081307 Sputcn32_1035
ME M16 unassigned subfamily M16A unassigned peptidases MER0090124 Sputcn32_2455
ME M16 unassigned subfamily M16B unassigned peptidases MER0090091 Sputcn32_1035
ME M16 unassigned subfamily M16B unassigned peptidases MER0090110 Sputcn32_3262
ME M16 unassigned subfamily M16B unassigned peptidases MER0090112 Sputcn32_3492
MF M17 M17.003 PepA aminopeptidase MER0102322 pepA2 Sputcn32_1178
MF M17 M17.004 PepB aminopeptidase MER0090100 Sputcn32_3126
MF M17 unassigned family M17 unassigned peptidases MER0090084 Sputcn32_0955
MF M17 unassigned family M17 unassigned peptidases MER0090058 pepA1 Sputcn32_0897
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0080589 map Sput200_1357
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0080588 pepQ Sputcn32_0014
MG M24 unassigned subfamily M24A unassigned peptidases MER1240230
MG M24 unassigned subfamily M24A unassigned peptidases MER0557657
MG M24 unassigned subfamily M24B unassigned peptidases MER0096844 Sputcn32_1198
MH M20 M20.007 Xaa-His dipeptidase MER0092203 Sputcn32_0954
MH M20 unassigned subfamily M20A unassigned peptidases MER0096889 dapE Sputcn32_2123
MH M20 unassigned subfamily M20C unassigned peptidases MER0586692
MH M20 unassigned subfamily M20C unassigned peptidases MER0562534
MH M20 unassigned family M20D unassigned peptidases MER0117849 Sput200_0383
MH M28 unassigned subfamily M28C unassigned peptidases MER0600627
MH M28 unassigned subfamily M28E unassigned peptidases MER0079114 Sput200_1054
MH M28 unassigned subfamily M28E unassigned peptidases MER1080709
MH M28 unassigned subfamily M28E unassigned peptidases MER1251209
MH M28 unassigned subfamily M28E unassigned peptidases MER0079113 Sputcn32_1593
MH M28 unassigned family M28 unassigned peptidases MER0079112 Sputcn32_1742
MH M28 unassigned family M28 unassigned peptidases MER0321780 Sput200_1769
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0086046 Sput200_0829
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0096930 pyrC Sputcn32_2994
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860894 Sputcn32_2513
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861934 Sput200_2545/Sputcn32_2514
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0096836 Sputcn32_1078
MM M50 M50.004 RseP peptidase MER0096849 Sputcn32_1355
MM M50 unassigned subfamily M50B unassigned peptidases MER0096940 Sputcn32_3167
MO M23 M23.004 lysostaphin MER0096800 Sputcn32_2750
MO M23 M23.011 YebA peptidase MER0080591 Sputcn32_1533
MO M23 M23.011 YebA peptidase MER0080587 Sputcn32_0266
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0080592 Sputcn32_1127
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0080594 Sputcn32_2285
MO M23 unassigned subfamily M23B unassigned peptidases MER0080595 Sputcn32_0494
MO M23 unassigned subfamily M23B unassigned peptidases MER0096811 Sputcn32_0403
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0096815 Sputcn32_0581
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0096816 Sput200_0521
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405589 flhB Sputcn32_2563
PA S1 S01.275 DegS peptidase MER0096823 Sputcn32_0741
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0965012 Sput200_0285
PA S1 unassigned subfamily S1A unassigned peptidases MER0217440
PA S1 unassigned subfamily S1C unassigned peptidases MER0096812 Sput200_0671/Sputcn32_0742 Sputcn32_0742
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0096825 Sputcn32_0757
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0096834 Sputcn32_0917
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0096904 Sputcn32_2437
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0096840 Sputcn32_1136
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0096856 glmS Sputcn32_3951
PB C44 unassigned family C44 unassigned peptidases MER0096867 Sputcn32_1792
PB S45 S45.004 acyl-homoserine lactone acylase MER0096831 Sput200_0855 Sputcn32_0860
PB T1 T01.006 HslV component of HslUV peptidase MER0096814 hslV Sputcn32_0529
PB T2 unassigned family T2 unassigned peptidases MER0096877 Sputcn32_1898
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0096861 Sputcn32_1667
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0096942 Sputcn32_3224
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0096818 Sputcn32_0641
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0096901 Sputcn32_2404
PC C26 C26.961 PuuD protein MER0096837 Sputcn32_1092
PC C26 C26.964 CTP synthetase MER0096919 pyrG Sputcn32_2758
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0096893 hisH Sputcn32_2182
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0443496 guaA Sput200_2786
PC C26 unassigned family C26 unassigned peptidases MER0441605 carA Sputcn32_2940
PC C26 unassigned family C26 unassigned peptidases MER0449314 Sput200_3128
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0096842 Sput200_1196
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0730945 Sput200_3998
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0734362 Sput200_0234
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0096809 Sputcn32_0376
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0175243 Sputcn32_0590
PC S51 S51.001 dipeptidase E MER0096898 pepE Sputcn32_2335
PC S51 unassigned family S51 unassigned peptidases MER1356829
SB S8 S08.125 AspA (Aeromonas sobria)-type peptidase MER0122705
SB S8 unassigned subfamily S8A unassigned peptidases MER0096828 Sput200_0823 Sputcn32_2477
SB S8 unassigned subfamily S8A unassigned peptidases MER0983334 Sput200_2501
SB S8 unassigned subfamily S8B unassigned peptidases MER1290222
SC S9 S09.010 oligopeptidase B MER0096805 Sputcn32_0135
SC S9 S09.012 dipeptidyl-peptidase 5 MER0096868 Sput200_2184
SC S9 S09.074 tyrosyl aminopeptidase (Raphanus-type) MER0096850 Sputcn32_1406
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0096892 Sputcn32_2173
SC S9 S09.941 highly similar to acyl-protein thioesterase 1 (Homo sapiens) MER0096895 Sputcn32_2312
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0122316
SC S9 unassigned subfamily S9A unassigned peptidases MER0096822 Sput200_0609/Sputcn32_0677 Sputcn32_0677
SC S9 unassigned subfamily S9A unassigned peptidases MER1294011
SC S9 unassigned subfamily S9A unassigned peptidases MER1295230
SC S9 unassigned subfamily S9A unassigned peptidases MER1283789
SC S9 unassigned subfamily S9A unassigned peptidases MER1293910
SC S9 unassigned subfamily S9B unassigned peptidases MER0096819 Sput200_0573 Sputcn32_0642
SC S9 unassigned subfamily S9B unassigned peptidases MER0996953 Sput200_1837
SC S9 unassigned subfamily S9B unassigned peptidases MER1299123
SC S9 unassigned subfamily S9C unassigned peptidases MER0096947 Sputcn32_3493
SC S9 unassigned subfamily S9C unassigned peptidases MER1299854
SC S9 unassigned subfamily S9C unassigned peptidases MER0096845 Sputcn32_1283
SC S9 unassigned family S9 unassigned peptidases MER0096846 Sputcn32_1287
SC S9 unassigned family S9 unassigned peptidases MER0096941 Sputcn32_3188
SC S9 unassigned family S9 unassigned peptidases MER0404614 Sput200_1293
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025478 Sputcn32_0642
SC S33 S33.010 SCO7095-type peptidase MER0096954 Sputcn32_3916
SC S33 S33.A46 YheT protein (Escherichia coli) MER0096939 Sputcn32_3122
SC S33 unassigned family S33 unassigned peptidases MER0037785 yfb1
SC S33 unassigned family S33 unassigned peptidases MER0096802 Sputcn32_0057
SC S33 unassigned family S33 unassigned peptidases MER0096808 Sputcn32_0309
SC S33 unassigned family S33 unassigned peptidases MER0096866 Sputcn32_1760
SC S33 unassigned family S33 unassigned peptidases MER0096891 Sputcn32_2125
SC S33 unassigned family S33 unassigned peptidases MER0096903 Sputcn32_2429
SC S33 unassigned family S33 unassigned peptidases MER0096925 bioH Sputcn32_3801
SE S11 S11.002 murein-DD-endopeptidase MER0096934 Sputcn32_3047
SE S11 unassigned family S11 unassigned peptidases MER0096927 Sputcn32_2873
SE S12 S12.006 class C beta-lactamase MER0096880 Sputcn32_2029
SE S12 S12.950 esterase EstB MER0096871 Sputcn32_1817
SE S12 unassigned family S12 unassigned peptidases MER0096830 Sputcn32_0856
SE S12 unassigned family S12 unassigned peptidases MER1011252 Sput200_2175
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0096881 Sput200_1976
SE S13 unassigned family S13 unassigned peptidases MER1314323
SE S13 unassigned family S13 unassigned peptidases MER1314333
SF S24 S24.001 repressor LexA MER0096951 lexA Sputcn32_3780
SF S24 S24.002 phage lambda repressor protein MER0029523
SF S24 S24.003 UmuD protein MER0124491
SF S24 S24.003 UmuD protein MER0096807
SF S26 S26.001 signal peptidase I MER0096841 Sputcn32_1158
SF S26 unassigned subfamily S26A unassigned peptidases MER1336649
SJ S16 S16.001 Lon-A peptidase MER0096855 Sputcn32_1492
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0096924 Sputcn32_2814
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0096859 Sputcn32_1638
SJ S16 unassigned family S16 unassigned peptidases MER0096913 Sputcn32_2719
SK S14 S14.001 peptidase Clp (type 1) MER0096854 clpP Sputcn32_1490
SK S41 S41.001 C-terminal processing peptidase-1 MER0096894 Sput200_2225
SK S41 S41.004 C-terminal processing peptidase-3 MER0096799 Sputcn32_0038
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0168118 Sputcn32_2731
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0168119 Sputcn32_2731
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0168117 Sputcn32_2731
SK S41 unassigned subfamily S41A unassigned peptidases MER1345303
SK S49 unassigned subfamily S49A unassigned peptidases MER1347384
SK S49 unassigned subfamily S49B unassigned peptidases MER0096883 Sputcn32_2078
SK S49 unassigned subfamily S49B unassigned peptidases MER0096900 Sputcn32_2394
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0096953 Sputcn32_3904
ST S54 unassigned family S54 unassigned peptidases MER1079628 Sput200_0906
ST S54 unassigned family S54 unassigned peptidases MER1084125 Sput200_2139
ST S54 unassigned family S54 unassigned peptidases MER0096873 Sput200_0047 Sputcn32_1853
ST S54 unassigned family S54 unassigned peptidases MER0096833 Sputcn32_3596
U- U32 U32.002 collagenase (Helicobacter-type) MER0096921 Sputcn32_2802
U- U32 U32.003 collagenase (Salmonella-type) MER0096829
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0096923 Sputcn32_2806
U- U32 unassigned family U32 unassigned peptidases MER0096922 Sputcn32_2805

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
S54 lineage specific expansion (5 homologues)