Delftia acidovorans

Taxonomy
Taxonomy database identifier: 80866
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Burkholderiales
Family Comamonadaceae
Genus Comamonas
Species acidovorans
Peptidase View peptidase sequences from Delftia acidovorans
Count of known and putative peptidases: 86, non-peptidase homologues 20
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1380053
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1381807
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1371235
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1382226
A- A39 unassigned family A39 unassigned peptidases MER1373564
A- A39 unassigned family A39 unassigned peptidases MER1375967
A- A39 unassigned family A39 unassigned peptidases MER1369057
AA A32 unassigned family A32 unassigned peptidases MER0241931 Daci_3664
AA A32 unassigned family A32 unassigned peptidases MER0241907 Daci_4782
AC A8 unassigned family A8 unassigned peptidases MER0091720 lspA1 Daci_0480
AC A8 unassigned family A8 unassigned peptidases MER0453306 lspA
AC A8 unassigned family A8 unassigned peptidases MER0091717 lspA/lspA2 Daci_5385
AD A24 A24.001 type 4 prepilin peptidase 1 MER0091716 DR66_3/DR66_3712/HMPREF9701_00696/HMPREF9702_00255 Daci_5490
AD A24 unassigned subfamily A24A unassigned peptidases MER1157019
AD A24 unassigned subfamily A24A unassigned peptidases MER1157046
CA C39 C39.005 colicin V processing peptidase MER0368999 Daci_3057
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0094066 pcp Daci_5729
CO C40 C40.006 PgpA peptidase MER0094131 Daci_3968
CO C40 C40.006 PgpA peptidase MER0453108
CO C40 unassigned family C40 unassigned peptidases MER0718394 HMPREF9701_03269/HMPREF9702_03707
CO C40 unassigned family C40 unassigned peptidases MER0163894 Daci_4081
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0091603 Daci_3264
MA M3 M03.004 oligopeptidase A MER0093540 Daci_3984
MA M41 M41.001 FtsH peptidase MER0102215
MA M41 non-peptidase homologue family M41 non-peptidase homologues MER0858433 ftsH
MA M41 unassigned family M41 unassigned peptidases MER0876574 ftsH
MA M48 M48.002 HtpX peptidase MER0074572 htpX Daci_1388
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0882892 Daci_2648/DR66_1845
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0883207 HMPREF9701_00199/HMPREF9702_05746
MA M48 unassigned subfamily M48A unassigned peptidases MER0074576 Daci_5337
MA M48 unassigned subfamily M48B unassigned peptidases MER0885380 HMPREF9701_01334
MA M48 unassigned subfamily M48B unassigned peptidases MER0885270 HMPREF9702_01377
MA M48 unassigned subfamily M48C unassigned peptidases MER0889236 DR66_214
MA M48 unassigned subfamily M48C unassigned peptidases MER0889439 Daci_0332
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0077807 Daci_1530
MA M78 unassigned family M78 unassigned peptidases MER0909798 DR66_1282
MA M78 unassigned family M78 unassigned peptidases MER0908740 HMPREF9702_01427
MA M90 unassigned family M90 unassigned peptidases MER0286882 Daci_2502
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469250 Daci_2901
ME M16 M16.019 YMXG peptidase MER0093301 Daci_1800
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0163962 Daci_1801
ME M16 unassigned subfamily M16B unassigned peptidases MER0163961 Daci_1801
ME M16 unassigned subfamily M16B unassigned peptidases MER0093299 Daci_3015
MF M17 unassigned family M17 unassigned peptidases MER0930295 DR66_5709
MF M17 unassigned family M17 unassigned peptidases MER0093300 pepA Daci_3539
MF M17 unassigned family M17 unassigned peptidases MER0093302 Daci_4427
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0093193 Daci_5037
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0093192 map Daci_4852
MG M24 unassigned subfamily M24B unassigned peptidases MER0093190 Daci_0925
MG M24 unassigned subfamily M24B unassigned peptidases MER1244021
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0855107 HMPREF9702_01845
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0818598 DR66_1985
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0840561 DR66_5111
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0848713 Daci_6028/HMPREF9702_05368
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0847036 HMPREF9701_00333/HMPREF9702_03479
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0843120 dapE
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0729952 HMPREF9701_02439
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0474884 Daci_2108
MH M20 unassigned subfamily M20A unassigned peptidases MER0842645 dapE
MH M20 unassigned subfamily M20A unassigned peptidases MER0091952 Daci_0060
MH M20 unassigned subfamily M20A unassigned peptidases MER0850625 HMPREF9702_03791
MH M20 unassigned subfamily M20A unassigned peptidases MER1214858
MH M20 unassigned subfamily M20A unassigned peptidases MER1222430
MH M20 unassigned family M20D unassigned peptidases MER0841456 DR66_1073
MH M20 unassigned family M20D unassigned peptidases MER0091946 Daci_5679
MH M20 unassigned family M20D unassigned peptidases MER0091947 Daci_5133
MH M20 unassigned family M20D unassigned peptidases MER0091948 Daci_1417
MH M20 unassigned family M20D unassigned peptidases MER0091950 Daci_1132
MH M20 unassigned family M20D unassigned peptidases MER0091951 Daci_0943
MH M20 unassigned family M20D unassigned peptidases MER0091954 Daci_2476
MH M20 unassigned family M20D unassigned peptidases MER0474685 Daci_2832
MH M20 unassigned family M20D unassigned peptidases MER0091953 Daci_4012
MH M20 unassigned family M20 unassigned peptidases MER0831124 DR66_586
MH M20 unassigned family M20 unassigned peptidases MER0854214 DR66_626
MH M20 unassigned family M20 unassigned peptidases MER0932857 HMPREF9701_00539/HMPREF9702_00088
MH M20 unassigned family M20 unassigned peptidases MER0091949 Daci_1369
MH M20 unassigned family M20 unassigned peptidases MER0854118 Daci_1208
MH M20 unassigned family M20 unassigned peptidases MER0793042 Daci_6039/DR66_5/HMPREF9701_02450/HMPREF9702_05357
MH M20 unassigned family M20 unassigned peptidases MER0473238 Daci_0239
MJ M38 M38.973 dihydropyrimidinase MER0869911 Daci_2864
MJ M38 M38.973 dihydropyrimidinase MER0862995 HMPREF9701_00332/HMPREF9702_/HMPREF9702_03480/hydA
MJ M38 M38.982 urease MER0863106 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0102220 Daci_4995
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862129 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865215 hutI
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0893501 DR66_3/DR66_3629/HMPREF9701_00812/HMPREF9702_00359
MM M50 unassigned subfamily M50B unassigned peptidases MER0898431 Daci_5414
MM M50 unassigned subfamily M50B unassigned peptidases MER0102217 Daci_4941
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0102221 Daci_5027
MO M23 unassigned subfamily M23B unassigned peptidases MER0093053 Daci_5906
MO M23 unassigned subfamily M23B unassigned peptidases MER0093041 Daci_2485
MS M75 unassigned family M75 unassigned peptidases MER0077806 Daci_1525
MT M81 unassigned family M81 unassigned peptidases MER0223153 Daci_6029
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0120273 Daci_1487
MU M103 M103.UNW family M103 non-peptidase homologues MER0105680 Daci_2323
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405832 Daci_0600
PA S1 S01.280 lysyl endopeptidase (bacteria) MER0143833 Daci_5718
PA S1 S01.453 MucD peptidase MER0406833 Daci_5265
PA S1 S01.477 AlgW peptidase MER0218706 Daci_5515
PA S1 non-peptidase homologue subfamily S1D non-peptidase homologues MER1275706
PA S1 non-peptidase homologue subfamily S1D non-peptidase homologues MER1275638
PA S1 unassigned subfamily S1A unassigned peptidases MER0957134 HMPREF9701_03631
PA S1 unassigned subfamily S1C unassigned peptidases MER0406453 Daci_1594
PA S1 unassigned subfamily S1D unassigned peptidases MER1275742
PA S1 unassigned subfamily S1E unassigned peptidases MER0951941 HMPREF9702_01376
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0074573 Daci_4769
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458006 Daci_5558
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0166607 Daci_5899
PB C59 unassigned family C59 unassigned peptidases MER0093678 Daci_3467
PB C59 unassigned family C59 unassigned peptidases MER0913770 HMPREF9701_02006/HMPREF9702_04331
PB S45 S45.003 cephalosporin C acylase precursor MER0109027 Daci_4805
PB S45 S45.004 acyl-homoserine lactone acylase MER0109177 Daci_3480
PB T1 T01.007 CodW component of CodWX peptidase MER0091305 hslV Daci_1459
PB T2 unassigned family T2 unassigned peptidases MER1089411 HMPREF9701_/HMPREF9701_01034/HMPREF9702_04209/iaaA
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0091306 Daci_1435
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0091307 Daci_2120
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091304 Daci_4564
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091308 Daci_3783
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091309 Daci_0780
PC C26 C26.957 GMP synthase MER0443031 guaA Daci_3013
PC C26 C26.959 TRP3 protein MER0435757 Daci_0768
PC C26 unassigned family C26 unassigned peptidases MER0436806 caoT/dcaT/ORF7NB/tdn/tdnT
PC C26 unassigned family C26 unassigned peptidases MER0450497 Daci_0917
PC C26 unassigned family C26 unassigned peptidases MER0451609 Daci_3185
PC C26 unassigned family C26 unassigned peptidases MER0451194 Daci_3715
PC C26 unassigned family C26 unassigned peptidases MER0440637 carA Daci_4932
PC C26 unassigned family C26 unassigned peptidases MER0446177 hisH Daci_5519
PC C56 C56.006 Hsp31 peptidase MER0164132 Daci_2046
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0124672 Daci_0998
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0165426 Daci_1880
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0165719 Daci_2415
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0176853
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0166547 Daci_5782
PE T5 T05.001 ornithine acetyltransferase precursor MER0091303 argJ Daci_5496
SB S8 unassigned subfamily S8A unassigned peptidases MER0975512 DR66_4762
SB S8 unassigned subfamily S8A unassigned peptidases MER0972217 HMPREF9701_01506
SB S8 unassigned subfamily S8A unassigned peptidases MER0247038 Daci_2297
SB S53 unassigned family S53 unassigned peptidases MER0074570 Daci_3662
SB S53 unassigned family S53 unassigned peptidases MER1357238
SC S9 S09.986 carboxylesterase-related protein MER0042901 pudA
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0214377 Daci_1485
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0074147 ATP23 MGG_00480
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212937 Daci_0373
SC S9 unassigned subfamily S9A unassigned peptidases MER1020997 Daci_1350/DR66_721/HMPR/HMPREF9701_01567
SC S9 unassigned subfamily S9B unassigned peptidases MER0998843 HMPREF9702_02210
SC S9 unassigned family S9 unassigned peptidases MER0997490 Daci_2/Daci_2413/HMPREF9701_05722/HMPREF9702_04971
SC S9 unassigned family S9 unassigned peptidases MER0212853 Daci_2495
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1027346 DR66_2451
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025351 cocE
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023965 Daci_5818
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025047 HMPREF9702_03846
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019476 Daci_3305/HMPREF9701_01920/HMPREF9702_03
SC S15 unassigned family S15 unassigned peptidases MER1020130 DR66_5808/HMPREF9701_06139
SC S33 S33.016 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (Burkholderia-type) MER0034992 bphD
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0042839 dehH1
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0212832 Daci_2272
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211318 Daci_4283
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208916 Daci_5601
SC S33 unassigned family S33 unassigned peptidases MER0102218 Daci_4961
SC S33 unassigned family S33 unassigned peptidases MER0102219 Daci_4964
SC S33 unassigned family S33 unassigned peptidases MER0210105 Daci_2557
SC S33 unassigned family S33 unassigned peptidases MER0212660 Daci_2855
SC S33 unassigned family S33 unassigned peptidases MER0211532 metX Daci_6044
SE S11 S11.002 murein-DD-endopeptidase MER0192767 Daci_4861
SE S11 unassigned family S11 unassigned peptidases MER0124873 Daci_0385
SE S11 unassigned family S11 unassigned peptidases MER0949144 HMPREF9701_03550
SE S11 unassigned family S11 unassigned peptidases MER1308096
SE S12 S12.950 esterase EstB MER0163250 Daci_0349
SE S12 S12.950 esterase EstB MER0118124 Daci_3034
SE S12 unassigned family S12 unassigned peptidases MER0074571 Daci_3787
SE S12 unassigned family S12 unassigned peptidases MER1004875 HMPREF9702_06032
SE S12 unassigned family S12 unassigned peptidases MER1012033 HMPREF9701_01083
SE S12 unassigned family S12 unassigned peptidases MER1008770 HMPREF9701_03492/HMPREF9702_04645
SE S12 unassigned family S12 unassigned peptidases MER0163415 Daci_0805
SE S12 unassigned family S12 unassigned peptidases MER0421859 Daci_3665
SE S12 unassigned family S12 unassigned peptidases MER0421860 Daci_5145
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0105494 Daci_0977
SE S13 unassigned family S13 unassigned peptidases MER1316199
SF S24 S24.001 repressor LexA MER0074569 lexA Daci_3565
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1043366 DR66_1744
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1042161 Daci_2539/HMPREF9701_05108
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1044440 HMPREF9701_03738
SF S24 unassigned family S24 unassigned peptidases MER1042437 DR66_2062
SF S24 unassigned family S24 unassigned peptidases MER1044631 DR66_2557
SF S24 unassigned family S24 unassigned peptidases MER1029838 DR66_697
SF S24 unassigned family S24 unassigned peptidases MER1041025 DR66_2032
SF S24 unassigned family S24 unassigned peptidases MER1041458 DR66_3829
SF S24 unassigned family S24 unassigned peptidases MER1044491 DR66_4265
SF S24 unassigned family S24 unassigned peptidases MER1044800 Daci_3217
SF S24 unassigned family S24 unassigned peptidases MER1041581 Daci_1326
SF S24 unassigned family S24 unassigned peptidases MER1040637 Daci_1619
SF S24 unassigned family S24 unassigned peptidases MER1042464 Daci_1929
SF S24 unassigned family S24 unassigned peptidases MER1041783 Daci_4113
SF S24 unassigned family S24 unassigned peptidases MER1044228 HMPREF9701_04940/HMPREF9702_05782
SF S24 unassigned family S24 unassigned peptidases MER1041383 HMPREF9702_03402
SF S24 unassigned family S24 unassigned peptidases MER1042783 HMPREF9702_01729
SF S24 unassigned family S24 unassigned peptidases MER1042216 HMPREF9701_01592
SF S24 unassigned family S24 unassigned peptidases MER1042016 HMPREF9701_00458
SF S26 S26.001 signal peptidase I MER0091718 Daci_5263
SF S26 S26.014 TraF peptidase MER0091719 traF Daci_0454
SF S26 S26.014 TraF peptidase MER0091721 HMPREF9702_02543 Daci_2717
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1047702 HMPREF9701_03619
SF S26 unassigned subfamily S26C unassigned peptidases MER1053327 HMPREF9701_04229
SF S26 unassigned subfamily S26C unassigned peptidases MER1052851 HMPREF9702_02815
SH S78 unassigned family S78 unassigned peptidases MER1079789 HMPREF9701_00371
SH S78 unassigned family S78 unassigned peptidases MER1072854 HMPREF9701_03134
SJ S16 S16.001 Lon-A peptidase MER0108954 Daci_2647
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0476903 Daci_0314
SK S14 S14.001 peptidase Clp (type 1) MER0120345 clpP1 Daci_2052
SK S14 S14.001 peptidase Clp (type 1) MER0118805 clpP2 Daci_2645
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1016238 Daci_1633
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0042912 clpP
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1018533 HMPREF9702_05949
SK S14 unassigned family S14 unassigned peptidases MER1015132 DR66_4035
SK S14 unassigned family S14 unassigned peptidases MER0359871 Daci_3437
SK S41 S41.004 C-terminal processing peptidase-3 MER0105157 Daci_1812
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1061354 Daci_2141
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1058870 HMPREF9701_06400
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1070136 HMPREF9702_05949
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1071809 clpP/DR66_2379/DR66_2573
SK S49 unassigned subfamily S49B unassigned peptidases MER0074575
SK S49 unassigned subfamily S49B unassigned peptidases MER1071070 HMPREF9701_00172
SK S49 unassigned subfamily S49B unassigned peptidases MER1065636 HMPREF9702_03428
SK S49 unassigned subfamily S49C unassigned peptidases MER1073184 Daci_3437
SS S66 unassigned family S66 unassigned peptidases MER0074574 Daci_4808
SS S66 unassigned family S66 unassigned peptidases MER1085099 HMPREF9701_04673/HMPREF9702_01005
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0110905 Daci_5314
ST S54 unassigned family S54 unassigned peptidases MER1077715 HMPREF9701_00915/HMPREF9702_00463
U- U32 U32.002 collagenase (Helicobacter-type) MER0142121 Daci_2456
U- U32 U32.003 collagenase (Salmonella-type) MER0126034 Daci_4811

GENOME ANALYSIS: Comparison with 31 completely sequenced genomes from family Comamonadaceae
Family Comment
A39 significant presence (7 homologues)
C39 significant presence (1 homologues)
C59 significant presence (2 homologues)
S14 lineage specific expansion (7 homologues)
S15 lineage specific expansion (6 homologues)
S24 lineage specific expansion (20 homologues)
S53 significant presence (2 homologues)
S54 significant presence (2 homologues)
S78 significant presence (2 homologues)