Geobacter sulfurreducens

Taxonomy
Taxonomy database identifier: 35554
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfuromonadales
Family Geobacteraceae
Genus Geobacter
Species sulfurreducens
Peptidase View peptidase sequences from Geobacter sulfurreducens
Count of known and putative peptidases: 79, non-peptidase homologues 20
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0040526 lspA GSU3135
AD A24 A24.019 ComC peptidase MER0040527 pilD/RW64_00980 KN400_2065
AE A31 non-peptidase homologue family A31 non-peptidase homologues MER0701624 RW64_05000
AE A31 non-peptidase homologue family A31 non-peptidase homologues MER0701291 hoxP
AE A31 unassigned family A31 unassigned peptidases MER0040550 GSU0786
AE A31 unassigned family A31 unassigned peptidases MER0040549 mvhP KN400_2370
AE A31 unassigned family A31 unassigned peptidases MER0040551 GSU0120
CA C1 unassigned subfamily C1A unassigned peptidases MER0040528 GSU2675
CD C14 C14.048 bacterial metacaspase MER0040529 KN400_0693
CL C82 C82.003 ykuD transpeptidase MER0077054 GSU0183
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244030 KN400_2339
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0742657 RW64_19300
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0739763 RW64_18500
CL C82 unassigned subfamily C82A unassigned peptidases MER0244059 GSU0181
CO C40 C40.006 PgpA peptidase MER0040532 GSU2277
CO C40 unassigned family C40 unassigned peptidases MER0040533 GSU0869
G- G5 unassigned family G5 unassigned peptidases MER0054473 GSU1573
G- G5 unassigned family G5 unassigned peptidases MER0054474 GSU1991
MA M6 unassigned family M6 unassigned peptidases MER0042035 GSU3016
MA M6 unassigned family M6 unassigned peptidases MER0331835
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0042303 ftsH-2 KN400_1832
MA M41 unassigned family M41 unassigned peptidases MER0042302 ftsH-1 GSU1180
MA M48 M48.019 GSU1437 putative peptidase MER0042387 GSU1437
MA M48 unassigned subfamily M48A unassigned peptidases MER0042372 GSU0318
MA M48 unassigned subfamily M48B unassigned peptidases MER0042355 htpX-1 KN400_0835
MA M48 unassigned subfamily M48B unassigned peptidases MER0042356 htpX2 GSU1567
MA M48 unassigned subfamily M48C unassigned peptidases MER0042386 GSU0462
MA M48 unassigned family M48 unassigned peptidases MER0042377 GSU1189
MA M78 unassigned family M78 unassigned peptidases MER0910305 RW64_08400
MA M90 unassigned family M90 unassigned peptidases MER0286945 KN400_0580
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0042058 GSU2807
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER1122527 GSU0927
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0040537 GSU0928
ME M16 unassigned subfamily M16B unassigned peptidases MER0040540 GSU3360
ME M16 unassigned subfamily M16B unassigned peptidases MER0040539 GSU0927
ME M16 unassigned subfamily M16B unassigned peptidases MER0040538 GSU1594
MF M17 unassigned family M17 unassigned peptidases MER0040541 pepA GSU0332
MG M24 M24.008 hyperthermophile prolidase MER0040546 pepQ-2 GSU2021
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0040545 pepQ-1 GSU1105
MG M24 unassigned subfamily M24A unassigned peptidases MER0042207 map GSU2835
MH M20 unassigned family M20D unassigned peptidases MER0040542 GSU0448
MH M28 unassigned subfamily M28B unassigned peptidases MER0042013 LOC100186889/pepF KN400_1899
MH M28 unassigned subfamily M28B unassigned peptidases MER0148778 LOC100186889/pepF KN400_1899
MH M42 unassigned family M42 unassigned peptidases MER0040548 GSU2196
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0038337 pyrC GSU1272
MJ M38 unassigned family M38 unassigned peptidases MER0042754 GSU1344
MJ M38 unassigned family M38 unassigned peptidases MER0042755 GSU1708
MM M50 unassigned subfamily M50B unassigned peptidases MER0042434 GSU1834
MM M50 unassigned subfamily M50B unassigned peptidases MER0042435 GSU1914
MO M23 M23.009 Mername-AA292 peptidase MER0042131 GSU1837
MO M23 M23.011 YebA peptidase MER0042130 GSU0499
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0042088 GSU1773
MU M103 M103.UNW family M103 non-peptidase homologues MER0040586 GSU2060
MU M103 M103.UPW family M103 unassigned peptidases MER0040587 tldD GSU0896
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0275748 flhB GSU0426
PA S1 S01.480 HtrA peptidase (Chlamydia trachomatis-type) MER0040553 degQ GSU0080
PA S1 unassigned subfamily S1B unassigned peptidases MER0963919 RW64_11800
PA S1 unassigned subfamily S1C unassigned peptidases MER0040552 degP GSU0331
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0041867 purF KN400_1659
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041891 glmS GSU0270
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041942 asnB GSU1953
PB C44 unassigned family C44 unassigned peptidases MER0037311 GSU1236
PB C44 unassigned family C44 unassigned peptidases MER0331836
PC C26 C26.954 carA protein MER0331833
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0040531 trpG GSU2382
PC C26 C26.957 GMP synthase MER0040530 guaA GSU2194
PC C26 unassigned family C26 unassigned peptidases MER0331832 GSU0936
PC C56 C56.001 PfpI peptidase MER0040534 GSU1159
PE T5 T05.002 ArgJ protein (archea) MER0042549 argJ GSU2049
S- S85 non-peptidase homologue family S85 non-peptidase homologues MER1039513 GSU0931
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1280715
SB S8 unassigned subfamily S8A unassigned peptidases MER0040555 GSU0891
SB S8 unassigned subfamily S8A unassigned peptidases MER0040554 KN400_2097
SB S8 unassigned subfamily S8B unassigned peptidases MER0040556 GSU3219 GSU3219
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001530 RW64_01370
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0042794 GSU2536
SC S9 unassigned subfamily S9C unassigned peptidases MER0040558 GSU2450
SC S33 S33.992 chloroperoxidase 1 (Streptomyces lividans-type) MER0040572 GSU1052
SC S33 unassigned family S33 unassigned peptidases MER0040574 metX GSU2462
SC S33 unassigned family S33 unassigned peptidases MER0040573 GSU2628
SC S33 unassigned family S33 unassigned peptidases MER0040575 GSU3157
SE S12 S12.950 esterase EstB MER0040559 GSU2047
SE S12 unassigned family S12 unassigned peptidases MER0040560 KN400_1344
SF S24 S24.001 repressor LexA MER0040570 lexA1 GSU0041
SF S24 S24.001 repressor LexA MER0040569 lexA2 GSU1617
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0040568 GSU3324
SF S24 unassigned family S24 unassigned peptidases MER1043904 RW64_18280
SF S26 S26.025 signal peptidase sipX MER0040571 lepB KN400_1241
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1047574 RW64_01710
SJ S16 S16.001 Lon-A peptidase MER0042618 loN-2 KN400_1813
SJ S16 S16.001 Lon-A peptidase MER0040563 loN-3 GSU3193
SJ S16 S16.001 Lon-A peptidase MER0040562 loN-1 GSU0923
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0040564 radA GSU0285
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0040566 GSU2105
SJ S16 unassigned family S16 unassigned peptidases MER0040567 GSU2433
SK S14 S14.001 peptidase Clp (type 1) MER0040561 clpP GSU1792
SK S41 S41.004 C-terminal processing peptidase-3 MER0040577 ctpA-1 GSU0969
SK S41 S41.004 C-terminal processing peptidase-3 MER0040576 ctpA-2 GSU1772
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1071695 GSU2773
SK S49 unassigned subfamily S49B unassigned peptidases MER1070002 RW64_03850
SK S49 unassigned subfamily S49B unassigned peptidases MER0040579 sppA-1 GSU0820
SK S49 unassigned subfamily S49B unassigned peptidases MER0040580 GSU2431
SK S49 unassigned subfamily S49B unassigned peptidases MER0040578 sppA-2 GSU1234
ST S54 S54.004 AarA peptidase MER0040582 GSU1188
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0040581 GSU0851
ST S54 unassigned family S54 unassigned peptidases MER0040583 GSU1665
U- U32 U32.002 collagenase (Helicobacter-type) MER0040585 GSU2556
U- U32 unassigned family U32 unassigned peptidases MER0040584 GSU3347

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Geobacter
Family Comment
A31 lineage specific expansion (5 homologues)
M6 significant presence (2 homologues)
M78 significant presence (1 homologues)
M90 significant presence (1 homologues)
S24 lineage specific expansion (4 homologues)
S49 lineage specific expansion (5 homologues)
S85 significant presence (1 homologues)