Agrobacterium vitis

Taxonomy
Taxonomy database identifier: 373
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Rhizobiaceae
Genus Agrobacterium
Species vitis
Peptidase View peptidase sequences from Agrobacterium vitis
Count of known and putative peptidases: 89, non-peptidase homologues 39
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241685 Avi_0232
AA A32 unassigned family A32 unassigned peptidases MER0241837 Avi_2013
AC A8 unassigned family A8 unassigned peptidases MER0324633
AD A24 unassigned subfamily A24A unassigned peptidases MER0426936 ctpB Avi_0221
CA C93 unassigned family C93 unassigned peptidases MER0391309 Avi_0197
CD C14 unassigned subfamily C14B unassigned peptidases MER0429402 Avi_2750
CL C82 C82.003 ykuD transpeptidase MER0154709 Avi_5810
CL C82 C82.003 ykuD transpeptidase MER0154710 Avi_5811
CL C82 C82.003 ykuD transpeptidase MER0463101 Avi_0061
CL C82 C82.003 ykuD transpeptidase MER0463102 Avi_1186
CL C82 C82.003 ykuD transpeptidase MER0463103 Avi_1187
CL C82 unassigned subfamily C82A unassigned peptidases MER0186431 Avi_1744
CL C82 unassigned subfamily C82A unassigned peptidases MER0461392 Avi_2943
CL C82 unassigned subfamily C82A unassigned peptidases MER0243894 Avi_4058
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0161479 Avi_0297
CO C40 unassigned family C40 unassigned peptidases MER1168090
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0299027 Avi_4115
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0162179 pepN Avi_1374
MA M3 unassigned subfamily M3A unassigned peptidases MER0187725 dcp Avi_4158
MA M3 unassigned subfamily M3B unassigned peptidases MER0162967 pepF Avi_3702
MA M4 unassigned family M4 unassigned peptidases MER0162454 Avi_1523
MA M41 M41.001 FtsH peptidase MER0175469 ftsH Avi_3627
MA M48 unassigned subfamily M48B unassigned peptidases MER0190892 htpX Avi_4296
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0162915 Avi_3698
MD M74 unassigned family M74 unassigned peptidases MER0172239 mepA Avi_0241
ME M16 unassigned subfamily M16B unassigned peptidases MER0161810 Avi_1074
MF M17 unassigned family M17 unassigned peptidases MER0172292 Avi_0292
MF M17 unassigned family M17 unassigned peptidases MER0162516 pepA Avi_1545
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0166714 map Avi_2271
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0154739 pepQ Avi_7600
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483308 pepQ Avi_3174
MG M24 unassigned subfamily M24A unassigned peptidases MER0395433 map Avi_3313
MG M24 unassigned subfamily M24B unassigned peptidases MER0154693 Avi_5355
MG M24 unassigned subfamily M24B unassigned peptidases MER0189947 Avi_2855
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0093754 hipO Avi_4372
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0154728 amaB Avi_7267
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0154737 amaB Avi_7539
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0842572 amaB
MH M20 unassigned subfamily M20A unassigned peptidases MER0154704 argE Avi_5675
MH M20 unassigned subfamily M20A unassigned peptidases MER0161575 dapE Avi_0474
MH M20 unassigned subfamily M20B unassigned peptidases MER0166392 Avi_1922
MH M20 unassigned family M20D unassigned peptidases MER0154684 Avi_5022
MH M20 unassigned family M20D unassigned peptidases MER0154688 Avi_5199
MH M20 unassigned family M20D unassigned peptidases MER0154725 Avi_7215
MH M20 unassigned family M20D unassigned peptidases MER0189394 Avi_3872
MH M20 unassigned family M20D unassigned peptidases MER0163076 Avi_4062
MH M20 unassigned family M20 unassigned peptidases MER0154692 dapE Avi_5344
MH M20 unassigned family M20 unassigned peptidases MER0154705 dapE Avi_5704
MH M20 unassigned family M20 unassigned peptidases MER0154735 amaB Avi_7482
MH M20 unassigned family M20 unassigned peptidases MER0855185 dapE
MH M20 unassigned family M20 unassigned peptidases MER0167023 celE Avi_3102
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0166970 Avi_3092
MJ M19 unassigned family M19 unassigned peptidases MER0154713 Avi_5916
MJ M19 unassigned family M19 unassigned peptidases MER0189216 Avi_3889
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154685 Avi_5090
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154696 Avi_5414
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154698 Avi_5431
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154716 Avi_5960
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154722 nagA Avi_6234
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154736 Avi_7538
MJ M38 unassigned family M38 unassigned peptidases MER0154715 hutI Avi_5959
MM M50 unassigned subfamily M50B unassigned peptidases MER0890818 Avi_2518
MN M55 unassigned family M55 unassigned peptidases MER0154733 Avi_7323
MO M23 M23.009 Mername-AA292 peptidase MER0167120 Avi_3949
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0166921 Avi_2662
MO M23 unassigned subfamily M23B unassigned peptidases MER0166331 Avi_1882
MQ M29 M29.001 aminopeptidase T MER0161398 ampS Avi_0137
MS M75 M75.001 imelysin MER0191347 Avi_0335
MT M81 unassigned family M81 unassigned peptidases MER0223190 Avi_6244
MT M81 unassigned family M81 unassigned peptidases MER0223191 Avi_6252
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0161758 tldD Avi_1036
MU M103 M103.UNW family M103 non-peptidase homologues MER0175383 Avi_0903
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405621 flhB Avi_0721
PA S1 S01.442 HtrA stress response protease (Brucella-type) MER0408399 htrA Avi_2485
PA S1 unassigned subfamily S1A unassigned peptidases MER0488382 Avi_9911
PA S1 unassigned subfamily S1C unassigned peptidases MER0327655 htrA Avi_2812
PA S1 unassigned subfamily S1C unassigned peptidases MER1273902
PA S1 unassigned subfamily S1C unassigned peptidases MER0206055 dop Avi_1368
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0162394 purF Avi_1499
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458066 gltB Avi_3734
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0166608 glmS Avi_2171
PB C44 unassigned family C44 unassigned peptidases MER0154707 purF Avi_5749
PB T1 T01.006 HslV component of HslUV peptidase MER0172185 hslV Avi_0032
PB T2 unassigned family T2 unassigned peptidases MER0154732 asg Avi_7322
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0161933 ggt Avi_1173
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0154694 ggt Avi_5360
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0154726 ggt Avi_7242
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0166503 ggt Avi_2100
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0439372 trpEG Avi_3259
PC C26 C26.964 CTP synthetase MER0450667 pyrG Avi_2233
PC C26 unassigned family C26 unassigned peptidases MER0154724 Avi_7109
PC C26 unassigned family C26 unassigned peptidases MER0446257 hisH Avi_0035
PC C26 unassigned family C26 unassigned peptidases MER0441252 carA Avi_3111
PC C26 unassigned family C26 unassigned peptidases MER0448029 Avi_3790
PC C26 unassigned family C26 unassigned peptidases MER0450696 guaA Avi_4150
PC C56 C56.001 PfpI peptidase MER0161872 pfpI Avi_1130
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0154706 glxA Avi_5747
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0154727 Avi_7250
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0154740 Avi_7628
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0162572 Avi_1644
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0162635 Avi_1645
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0166815 Avi_2590
PE P1 unassigned family P01 unassigned peptidases MER0154711 Avi_5913
PE T5 T05.001 ornithine acetyltransferase precursor MER0167165 argJ Avi_3979
SB S8 unassigned subfamily S8A unassigned peptidases MER0974654 Avi_0697
SB S8 unassigned subfamily S8A unassigned peptidases MER0975887 Avi_1641
SC S9 S09.010 oligopeptidase B MER0043831 ptrB Avi_1258
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154699 Avi_5482
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154701 Avi_5529
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154708 dlhH Avi_5769
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154717 Avi_6018
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154718 Avi_6018
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154588 Avi_9052
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154734 Avi_7419
SC S9 unassigned subfamily S9C unassigned peptidases MER0212570 Avi_9888
SC S9 unassigned family S9 unassigned peptidases MER0154700 Avi_5486
SC S9 unassigned family S9 unassigned peptidases MER0154714 Avi_5943
SC S9 unassigned family S9 unassigned peptidases MER1003086 fghA
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023416 Avi_1297
SC S33 S33.001 prolyl aminopeptidase MER0162324 pip Avi_1479
SC S33 S33.001 prolyl aminopeptidase MER0166454 pip Avi_2058
SC S33 S33.B15 PF3D7_1410100 g.p. (Plasmodium falciparum) MER0154738 prxC Avi_7597
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0154593 Avi_9230
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER1342948
SC S33 unassigned family S33 unassigned peptidases MER0154686 Avi_5112
SC S33 unassigned family S33 unassigned peptidases MER0154703 Avi_5637
SC S33 unassigned family S33 unassigned peptidases MER0154719 Avi_6084
SC S33 unassigned family S33 unassigned peptidases MER0154720 pcaD Avi_6126
SC S33 unassigned family S33 unassigned peptidases MER0154586 Avi_9504
SC S33 unassigned family S33 unassigned peptidases MER0154730 grsT Avi_7295
SC S33 unassigned family S33 unassigned peptidases MER1338741
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0166550 dacF Avi_2154
SE S11 unassigned family S11 unassigned peptidases MER0161690 Avi_1030
SE S11 unassigned family S11 unassigned peptidases MER0166657 dacF Avi_2194
SE S11 unassigned family S11 unassigned peptidases MER0192787 dac Avi_4061
SE S12 S12.950 esterase EstB MER0192909 Avi_4084
SE S12 unassigned family S12 unassigned peptidases MER0154712 Avi_5915
SE S12 unassigned family S12 unassigned peptidases MER0421907 Avi_2236
SE S12 unassigned family S12 unassigned peptidases MER0421908 Avi_2913
SF S24 S24.001 repressor LexA MER0166763 lexA Avi_2561
SF S24 unassigned family S24 unassigned peptidases MER1040181 Avi_0583
SF S24 unassigned family S24 unassigned peptidases MER1041030 Avi_3076
SF S24 unassigned family S24 unassigned peptidases MER0471632 Avi_1954
SF S26 S26.001 signal peptidase I MER0162250 lepB Avi_1447
SF S26 S26.014 TraF peptidase MER0154587 traF Avi_9596
SF S26 S26.014 TraF peptidase MER0154592 traF Avi_9191
SF S26 S26.014 TraF peptidase MER0154595 traF Avi_8132
SF S26 S26.014 TraF peptidase MER0154723 traF Avi_7065
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0166861 sipf Avi_2598
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0161634 Avi_0860
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0162058 Avi_1337
SH S78 unassigned family S78 unassigned peptidases MER0323037
SJ S16 S16.001 Lon-A peptidase MER0299881 lon Avi_1700
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1031626 radA
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1327391
SJ S16 unassigned family S16 unassigned peptidases MER1326597
SK S14 S14.001 peptidase Clp (type 1) MER0166259 clpP Avi_1696
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0154721 Avi_6185
SK S14 unassigned family S14 unassigned peptidases MER0175438 clpP Avi_3244
SK S41 unassigned subfamily S41A unassigned peptidases MER0163144 Avi_4300
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER1071163 Avi_6185
SK S49 unassigned subfamily S49B unassigned peptidases MER1068384 sohB
SK S49 unassigned subfamily S49B unassigned peptidases MER0321314 Avi_2314
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1078912 Avi_2805
ST S54 unassigned family S54 unassigned peptidases MER1080884 Avi_2202

GENOME ANALYSIS: Comparison with 38 completely sequenced genomes from family Rhizobiaceae
Family Comment
C93 significant presence (1 homologues)
M4 significant presence (1 homologues)
M55 significant presence (1 homologues)
S8 significant decrease in homologues (2 homologues)
T2 significant presence (1 homologues)