Yersinia intermedia

Taxonomy
Taxonomy database identifier: 631
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Yersinia
Species intermedia
Peptidase View peptidase sequences from Yersinia intermedia
Count of known and putative peptidases: 61, non-peptidase homologues 19
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375146 wapA_3
AC A8 A08.001 signal peptidase II MER0583641 lspA
AC A8 unassigned family A8 unassigned peptidases MER1154875
AD A24 unassigned subfamily A24A unassigned peptidases MER0177636 CH53_2666/pppA1 yinte0001_5590
AD A24 unassigned subfamily A24A unassigned peptidases MER1157516 yst1O
AD A24 unassigned subfamily A24A unassigned peptidases MER1157737 outO
AD A24 unassigned subfamily A24A unassigned peptidases MER1157431
AD A24 unassigned subfamily A24A unassigned peptidases MER1157733
AE A31 A31.001 HybD peptidase MER0177263
AE A31 A31.003 HycI peptidase MER0177604
AF A26 non-peptidase homologue family A26 non-peptidase homologues MER1159487
AF A26 unassigned family A26 unassigned peptidases MER1159544 pla
AF A26 unassigned family A26 unassigned peptidases MER0184826 yinte0001_11700
CA C39 C39.005 colicin V processing peptidase MER0233611 yinte0001_33840
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0445885
CD C80 unassigned family C80 unassigned peptidases MER0029933 yinte0001_10500
CD C80 unassigned family C80 unassigned peptidases MER0032131 yinte0001_10500
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0112907 pcp yinte0001_24940
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243833
CL C82 unassigned subfamily C82A unassigned peptidases MER0076692 CH53_4110/ycfS/yin/yinte0001_13750 Dvul_2495
CO C40 C40.004 spr peptidase MER0452438
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0178267
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0376927 yinte0001_17940
G- G5 unassigned family G5 unassigned peptidases MER0937141 CH/ERS008485_03640/yinte0001_25280
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0336032 yinte0001_13020
MA M3 M03.004 oligopeptidase A MER0113120
MA M10 M10.052 peptidase A (Erwinia-type) MER0177747 yinte0001_27340
MA M10 M10.054 peptidase C (Erwinia-type) MER1208598 prtC_3
MA M10 M10.054 peptidase C (Erwinia-type) MER0188093 yinte0001_27350
MA M10 unassigned subfamily M10B unassigned peptidases MER1209856
MA M10 unassigned subfamily M10B unassigned peptidases MER1209922
MA M10 unassigned subfamily M10B unassigned peptidases MER1209401
MA M10 unassigned subfamily M10B unassigned peptidases MER1210002
MA M10 unassigned subfamily M10B unassigned peptidases MER0467412
MA M32 M32.003 TcMCP1 carboxypeptidase MER1250091 ypwA
MA M32 M32.003 TcMCP1 carboxypeptidase MER0177991 yinte0001_17300
MA M32 unassigned family M32 unassigned peptidases MER1246495
MA M41 M41.001 FtsH peptidase MER0236822 ftsH yinte0001_33110
MA M48 M48.002 HtpX peptidase MER0178239 htpX yinte0001_14630
MA M48 M48.022 low osmolarity induced peptidase MER0883818 CH53_2603
MA M48 M48.022 low osmolarity induced peptidase MER0885927 yggG_2/yinte0001_42520
MA M48 M48.023 BepA (Escherichia coli) MER0888964 bepA
MA M90 M90.001 MtfA peptidase MER0227922 yinte0001_22980
MC M14 M14.034 murein peptide amidase MpaA MER0835515 CH53_4051/ERS008485_00332
MD M15 unassigned subfamily M15B unassigned peptidases MER0837360 CH53_566/ERS008485_0/yinte0001_9840
MD M15 unassigned subfamily M15C unassigned peptidases MER0188643 yinte0001_27320
MD M74 M74.001 murein endopeptidase MER0191335 yinte0001_8240
MD M74 unassigned family M74 unassigned peptidases MER0630846
ME M16 M16.001 pitrilysin MER0177702 yinte0001_5330
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0177429
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470911
MF M17 M17.003 PepA aminopeptidase MER0177372 pepA yinte0001_33580
MF M17 M17.004 PepB aminopeptidase MER0340531 pepB yinte0001_7980
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0177103 yinte0001_5100
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0177303
MG M24 M24.004 aminopeptidase P (bacteria) MER0112474 yinte0001_4740
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0178100
MG M24 unassigned subfamily M24A unassigned peptidases MER1241808
MG M24 unassigned subfamily M24A unassigned peptidases MER1221213
MH M20 M20.003 peptidase T MER0178140
MH M20 M20.007 Xaa-His dipeptidase MER0113356
MH M20 M20.010 DapE peptidase MER0475174
MH M20 M20.974 acetylornithine deacetylase ArgE MER0369940 argE yinte0001_39780
MH M20 unassigned subfamily M20B unassigned peptidases MER0113272
MH M28 M28.005 IAP aminopeptidase MER1246162
MH M28 M28.005 IAP aminopeptidase MER0190401 yinte0001_30010
MH M28 unassigned subfamily M28C unassigned peptidases MER1246217
MJ M38 M38.982 urease MER0045630 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864228 allB
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863899 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0873444 CH53_480/nfdA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863303 yinte0001_8930
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860381 hutI
MM M50 M50.004 RseP peptidase MER0894728 rseP/yinte0001_5020
MO M23 M23.011 YebA peptidase MER0178065 yinte0001_20800
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0479051
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478092
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478149
MO M23 unassigned subfamily M23B unassigned peptidases MER0479494
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0177563
MU M103 M103.UNW family M103 non-peptidase homologues MER0177521 yinte0001_1200
NB N6 N06.003 EscU protein (Escherichia coli) MER0327137
PA S1 S01.260 B1598 peptidase MER0488569
PA S1 S01.273 DegP peptidase MER0327452 yinte0001_29850
PA S1 unassigned subfamily S1B unassigned peptidases MER0961703 degS
PA S1 unassigned subfamily S1C unassigned peptidases MER1270380
PA S1 unassigned subfamily S1C unassigned peptidases MER0327490 yinte0001_730
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0176857
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459209
PB C44 unassigned family C44 unassigned peptidases MER0177214
PB C59 unassigned family C59 unassigned peptidases MER0411030
PB T1 T01.006 HslV component of HslUV peptidase MER0237370 hslV yinte0001_39090
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0113422 yinte0001_25490
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436203
PC C26 C26.957 GMP synthase MER0443284
PC C26 C26.964 CTP synthetase MER0448400
PC C26 unassigned family C26 unassigned peptidases MER0441495
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0176816
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0177153
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0177955 yinte0001_25680
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290591 prcA
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290514 prcA
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290458 prcA
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290615
SB S8 unassigned subfamily S8A unassigned peptidases MER0275405 yinte0001_41890
SC S9 S09.010 oligopeptidase B MER0178174
SC S9 S09.A43 YpfH protein (Escherichi coli) MER0209832
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209327
SC S9 unassigned subfamily S9B unassigned peptidases MER1001889 fghA
SC S9 unassigned subfamily S9B unassigned peptidases MER0998260 yeiG
SC S9 unassigned subfamily S9B unassigned peptidases MER0999014 CH53_1327/ERS008485_03259
SC S9 unassigned subfamily S9B unassigned peptidases MER0997117 yinte0001_23330
SC S9 unassigned subfamily S9B unassigned peptidases MER0997480 yinte0001_42090
SC S33 S33.001 prolyl aminopeptidase MER0113746 yinte0001_14950
SC S33 unassigned family S33 unassigned peptidases MER0214544
SC S82 unassigned family S82 unassigned homologues MER0218737
SC S82 unassigned family S82 unassigned homologues MER0219011
SE S11 S11.002 murein-DD-endopeptidase MER0352299 yinte0001_24280
SE S11 S11.003 penicillin-binding protein 6 MER0351213 yinte0001_12070
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0351267 yinte0001_27940
SE S11 unassigned family S11 unassigned peptidases MER0941817 blaA_1
SE S11 unassigned family S11 unassigned peptidases MER0950721 blaA
SE S12 S12.006 class C beta-lactamase MER0176150 blaB
SE S12 unassigned family S12 unassigned peptidases MER1006580 ampH/yinte0001_11740
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0113745
SF S24 S24.001 repressor LexA MER0176977
SF S24 S24.002 phage lambda repressor protein MER0471411
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1040677 umuD
SF S24 unassigned family S24 unassigned peptidases MER1043896 c2
SF S26 S26.001 signal peptidase I MER0113639 yinte0001_6740
SJ S16 S16.001 Lon-A peptidase MER0112829
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0472052
SJ S16 unassigned family S16 unassigned peptidases MER1031564 radA/yinte0001_32010
SK S14 S14.001 peptidase Clp (type 1) MER0177921 clpP yinte0001_25820
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0177830 yinte0001_26950
SK S41 S41.001 C-terminal processing peptidase-1 MER0178206 yinte0001_14640
SK S41 unassigned subfamily S41A unassigned peptidases MER1344896
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1066032 sohB
SK S49 unassigned subfamily S49A unassigned peptidases MER1342146 sppA
SK S49 unassigned subfamily S49B unassigned peptidases MER1065731 sohB/yinte0001_18160
SK S49 unassigned subfamily S49B unassigned peptidases MER1353774
SK S49 unassigned subfamily S49B unassigned peptidases MER0113098 yinte0001_19220
ST S54 unassigned family S54 unassigned peptidases MER1076800 glpG
U- U32 U32.002 collagenase (Helicobacter-type) MER0177050
U- U69 unassigned family U69 unassigned peptidases MER0275406 yinte0001_41890

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Yersinia
Family Comment
A39 significant decrease in homologues (1 homologues)
M23 lineage specific expansion (5 homologues)
U69 significant decrease in homologues (1 homologues)