Shewanella frigidimarina

Taxonomy
Taxonomy database identifier: 56812
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Genus Shewanella
Species frigidimarina
Peptidase View peptidase sequences from Shewanella frigidimarina
Count of known and putative peptidases: 112, non-peptidase homologues 36
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 unassigned family A39 unassigned peptidases MER1374187
A- A39 unassigned family A39 unassigned peptidases MER1373696
AC A8 A08.001 signal peptidase II MER0049231 lspA1 Sfri_2889
AC A8 unassigned family A8 unassigned peptidases MER0049254 Sfri_3463
AD A24 A24.001 type 4 prepilin peptidase 1 MER0049212 Sfri_3785
AE A31 unassigned family A31 unassigned peptidases MER0049239 Sfri_2106
CA C93 unassigned family C93 unassigned peptidases MER0394341 Sfri_0431
CA C93 unassigned family C93 unassigned peptidases MER0393005 Sfri_1372
CL C60 unassigned subfamily C60A unassigned peptidases MER0049227 Sfri_1626
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244120 Sfri_1589
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461907 Sfri_3255
CO C40 C40.004 spr peptidase MER0094178 Sfri_3992
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0337323 Sfri_3524
MA M2 unassigned family M2 unassigned peptidases MER0093470 Sfri_1887
MA M3 M03.004 oligopeptidase A MER0080724 Sfri_3874
MA M3 unassigned subfamily M3A unassigned peptidases MER0093472 Sfri_3613
MA M3 unassigned subfamily M3A unassigned peptidases MER0093471 Sfri_2334
MA M6 unassigned family M6 unassigned peptidases MER0049243 Sfri_0047
MA M13 M13.009 Zmp1 peptidase (Mycobacterium-type) MER0096977 Sfri_1958
MA M41 M41.001 FtsH peptidase MER0089773 ftsH Sfri_0983
MA M48 M48.002 HtpX peptidase MER0049263 htpX Sfri_1568
MA M48 M48.023 BepA (Escherichia coli) MER0051801 Sfri_1755
MA M48 non-peptidase homologue subfamily M48B non-peptidase homologues MER0887485 Sfri_2522
MA M48 unassigned subfamily M48C unassigned peptidases MER0051800 Sfri_0972
MA M56 unassigned family M56 unassigned peptidases MER0080713 Sfri_2522
MA M56 unassigned family M56 unassigned peptidases MER0934653 Sfri_3584
MA M61 unassigned family M61 unassigned peptidases MER0080719 Sfri_2772
MA M61 unassigned family M61 unassigned peptidases MER0049236 Sfri_1521
MA M90 unassigned family M90 unassigned peptidases MER0286878 Sfri_1105
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0049211 Sfri_2149
MC M14 unassigned family M14 unassigned peptidases MER0049242 Sfri_0100
MC M14 unassigned family M14 unassigned peptidases MER0049276
MD M15 unassigned subfamily M15B unassigned peptidases MER0049232 Sfri_1764
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0080704 Sfri_0304
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0049267 Sfri_0304
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0049220 Sfri_1071
ME M16 unassigned subfamily M16A unassigned peptidases MER0080718 Sfri_2671
ME M16 unassigned subfamily M16B unassigned peptidases MER0055553 Sfri_0303
ME M16 unassigned subfamily M16B unassigned peptidases MER0049221 Sfri_1071
MF M17 M17.003 PepA aminopeptidase MER0080706 pepA Sfri_0924
MF M17 M17.004 PepB aminopeptidase MER0080721 Sfri_3274
MF M17 unassigned family M17 unassigned peptidases MER0049213 Sfri_0963
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0049273 Sfri_1269
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0096959 pepQ Sfri_0014
MG M24 unassigned subfamily M24B unassigned peptidases MER0049278 Sfri_3047
MG M24 unassigned subfamily M24B unassigned peptidases MER0049279 Sfri_3046
MH M20 M20.007 Xaa-His dipeptidase MER0049214 Sfri_0962
MH M20 unassigned subfamily M20A unassigned peptidases MER0092061 Sfri_0190
MH M20 unassigned subfamily M20A unassigned peptidases MER0052503 dapE Sfri_1765
MH M20 unassigned family M20D unassigned peptidases MER0049266 Sfri_0302
MH M20 unassigned family M20D unassigned peptidases MER0049226 Sfri_3605
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0049250 Sfri_3859
MH M28 unassigned subfamily M28E unassigned peptidases MER0049230 Sfri_2895
MH M28 unassigned subfamily M28E unassigned peptidases MER0080708 Sfri_1287
MH M28 unassigned subfamily M28E unassigned peptidases MER0049261 Sfri_1604
MH M28 unassigned subfamily M28F unassigned peptidases MER0080723 Sfri_3713
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0093369 Sfri_3183
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0096971 pyrC Sfri_0589
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867821 Sfri_0032
MJ M38 unassigned family M38 unassigned peptidases MER0096974 Sfri_0801
MM M50 unassigned subfamily M50B unassigned peptidases MER0051803 Sfri_1277 Sfri_1277
MM M50 unassigned subfamily M50B unassigned peptidases MER0049269 Sfri_0537
MO M23 M23.011 YebA peptidase MER0049229 Sfri_2450
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0049258 Sfri_2972
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049219 Sfri_4022
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049222 Sfri_1059
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049262 Sfri_1575
MO M23 unassigned subfamily M23B unassigned peptidases MER0049209 Sfri_3797
MS M75 unassigned family M75 unassigned peptidases MER0096976
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0049238 Sfri_3731
MU M103 M103.UNW family M103 non-peptidase homologues MER0049237 Sfri_3721
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327351
PA S1 S01.275 DegS peptidase MER0049235 Sfri_3363
PA S1 unassigned subfamily S1C unassigned peptidases MER0051802 Sfri_3362
PA S46 unassigned family S46 unassigned peptidases MER0096969 Sfri_3347
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0096993 Sfri_1399
PB C44 C44.976 AsnB protein MER0097002 Sfri_1602
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0181435 Sfri_4040
PB C44 unassigned family C44 unassigned peptidases MER0097007 Sfri_1870
PB S45 S45.004 acyl-homoserine lactone acylase MER0049277 Sfri_0771
PB T1 T01.007 CodW component of CodWX peptidase MER0049210 hslV Sfri_3764
PB T2 unassigned family T2 unassigned peptidases MER0049272 Sfri_1445
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0091459 Sfri_2330
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0438577 Sfri_3302
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0096996 Sfri_1428
PC C26 C26.961 PuuD protein MER0080720 Sfri_3012
PC C26 C26.964 CTP synthetase MER0096982 pyrG Sfri_1051
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0097003 hisH Sfri_1716
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0096912 guaA Sfri_1138
PC C26 unassigned family C26 unassigned peptidases MER0441242 carA Sfri_0975
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0096975 Sfri_0805
PC S51 S51.001 dipeptidase E MER0097001 Sfri_1567
SB S8 unassigned subfamily S8A unassigned peptidases MER0049218 Sfri_2692
SB S8 unassigned subfamily S8A unassigned peptidases MER0049260 Sfri_3638
SB S8 unassigned subfamily S8A unassigned peptidases MER0049271 Sfri_0513
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0049270 Sfri_0532 Sfri_0532
SC S9 S09.012 dipeptidyl-peptidase 5 MER0049217 Sfri_2155
SC S9 S09.941 highly similar to acyl-protein thioesterase 1 (Homo sapiens) MER0210021 Sfri_2310
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0214908 Sfri_3328
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1000445 Sfri_3839
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0208734 Sfri_0519
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209531 Sfri_1658
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209652 Sfri_3395
SC S9 unassigned subfamily S9A unassigned peptidases MER0049264 Sfri_0246 Sfri_0246
SC S9 unassigned subfamily S9A unassigned peptidases MER0080722 Sfri_3635
SC S9 unassigned subfamily S9B unassigned peptidases MER0049256 Sfri_3301
SC S9 unassigned subfamily S9B unassigned peptidases MER0997107 Sfri_4058
SC S9 unassigned subfamily S9B unassigned peptidases MER0997013 Sfri_3426
SC S9 unassigned subfamily S9C unassigned peptidases MER0049253 Sfri_2817
SC S9 unassigned subfamily S9C unassigned peptidases MER1303086
SC S9 unassigned family S9 unassigned peptidases MER0049247 Sfri_3832
SC S9 unassigned family S9 unassigned peptidases MER0049248 Sfri_3833
SC S9 unassigned family S9 unassigned peptidases MER0049252 Sfri_2778
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022471 Sfri_3301
SC S15 unassigned family S15 unassigned peptidases MER0049249 Sfri_3839
SC S33 S33.010 SCO7095-type peptidase MER0096962 Sfri_0039
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209228 Sfri_2042
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214741 Sfri_2056
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213808 Sfri_3680
SC S33 unassigned family S33 unassigned peptidases MER0096963 Sfri_0064
SC S33 unassigned family S33 unassigned peptidases MER0096964 bioH Sfri_0242
SC S33 unassigned family S33 unassigned peptidases MER0096965 Sfri_0281
SC S33 unassigned family S33 unassigned peptidases MER0096973 Sfri_0775
SC S33 unassigned family S33 unassigned peptidases MER0096980 Sfri_1008
SC S33 unassigned family S33 unassigned peptidases MER0096994 Sfri_1410
SC S33 unassigned family S33 unassigned peptidases MER0097004 Sfri_1732
SE S11 S11.002 murein-DD-endopeptidase MER0049274 Sfri_0851
SE S11 unassigned family S11 unassigned peptidases MER0080705 Sfri_0695
SE S12 unassigned family S12 unassigned peptidases MER0421743 Sfri_3124
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0049216 Sfri_1920
SF S24 S24.001 repressor LexA MER0049265 lexA Sfri_0260
SF S24 S24.003 UmuD protein MER0049241 Sfri_1963
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1040183 Sfri_3452
SF S24 unassigned family S24 unassigned peptidases MER0049244 Sfri_1648
SF S26 S26.001 signal peptidase I MER0049259 Sfri_2930
SJ S16 S16.001 Lon-A peptidase MER0080715 Sfri_2594
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0096981 Sfri_1010
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0080717 Sfri_2655
SK S14 S14.001 peptidase Clp (type 1) MER0080716 clpP Sfri_2596
SK S14 unassigned family S14 unassigned peptidases MER0049245 Sfri_1678
SK S41 S41.001 C-terminal processing peptidase-1 MER0049234 Sfri_2228
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0049268 Sfri_0592
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0078698 Sfri_1080
SK S41 non-peptidase homologue family S41 non-peptidase homologues MER0096983
SK S41 unassigned subfamily S41A unassigned peptidases MER1345166
SK S49 unassigned subfamily S49B unassigned peptidases MER0080709 Sfri_2145
SK S49 unassigned subfamily S49B unassigned peptidases MER0080714 Sfri_2570
ST S54 unassigned family S54 unassigned peptidases MER0097008 Sfri_1875
U- U32 U32.002 collagenase (Helicobacter-type) MER0049225 Sfri_1022
U- U32 U32.003 collagenase (Salmonella-type) MER0049240 Sfri_2078
U- U32 U32.003 collagenase (Salmonella-type) MER0049275 Sfri_0821
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0049223 Sfri_1013
U- U32 unassigned family U32 unassigned peptidases MER0049224 Sfri_1014

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
M13 significant decrease in homologues (1 homologues)
S12 significant decrease in homologues (1 homologues)
S16 significant decrease in homologues (3 homologues)
S46 significant decrease in homologues (1 homologues)