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Shewanella denitrificans

Taxonomy
Taxonomy database identifier: 192073
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Species denitrificans
Genus Shewanella
Peptidase View peptidase sequences from Shewanella denitrificans
Count of known and putative peptidases: 137, non-peptidase homologues 48
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A1 A01.095 shewasin A (Shewanella amazonensis) MER0129251 Sden_0804
AC A8 A08.001 signal peptidase II MER0049194 lspA Sden_2722
AC A8 A08.001 signal peptidase II MER1152485
AD A24 A24.001 type 4 prepilin peptidase 1 MER0049197 Sden_3391
CA C39 C39.005 colicin V processing peptidase MER0049203 Sden_0474
CA C39 unassigned family C39 unassigned peptidases MER0049200 Sden_2967
CA C93 unassigned family C93 unassigned peptidases MER0393879 Sden_0379
CF C15 non-peptidase homologue family C15 non-peptidase homologues MER0697070 Sden_2971
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244125 Sden_2376
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461884 Sden_0707
CO C40 C40.004 spr peptidase MER0071593 Sden_3689
G- G5 G05.004 microcystinase MlrA MER0071517 Sden_0892
G- G5 unassigned family G5 unassigned peptidases MER0071549 Sden_1909
MA M1 unassigned family M1 unassigned peptidases MER0071503 Sden_0409
MA M2 unassigned family M2 unassigned peptidases MER0071554 Sden_2117
MA M3 M03.004 oligopeptidase A MER0071589 Sden_3595
MA M3 unassigned subfamily M3A unassigned peptidases MER0071537 Sden_1597
MA M3 unassigned subfamily M3A unassigned peptidases MER0071580 Sden_3306
MA M4 M04.016 PA peptidase (Aeromonas-type) MER0050231 Sden_3015
MA M6 unassigned family M6 unassigned peptidases MER0049184 Sden_0094
MA M13 M13.009 Zmp1 peptidase (Mycobacterium-type) MER0339355 Sden_0904
MA M13 unassigned family M13 unassigned peptidases MER0071521 Sden_1089
MA M32 non-peptidase homologue family M32 non-peptidase homologues MER0232542 Sden_0880
MA M32 unassigned family M32 unassigned peptidases MER0071516 Sden_0882
MA M35 M35.003 EcpA peptidase MER0071528 Sden_1380
MA M35 M35.003 EcpA peptidase MER0071568 Sden_2616
MA M41 M41.001 FtsH peptidase MER0049153 ftsH Sden_1000
MA M48 M48.002 HtpX peptidase MER0071555 htpX Sden_2130
MA M48 M48.023 BepA (Escherichia coli) MER0051798 Sden_1647
MA M48 unassigned subfamily M48C unassigned peptidases MER0051799 Sden_0992
MA M56 unassigned family M56 unassigned peptidases MER0049187 Sden_0676
MA M56 unassigned family M56 unassigned peptidases MER0049198 Sden_0579
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0049178 Sden_2326
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0900671 Sden_3700
MA M61 unassigned family M61 unassigned peptidases MER0071567 Sden_2554
MA M90 unassigned family M90 unassigned peptidases MER0286881 Sden_1249
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0071560 Sden_2208
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0049141 Sden_1905
MD M15 unassigned subfamily M15B unassigned peptidases MER0049155 Sden_1813
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0049158 Sden_3485
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0049167 Sden_1218
ME M16 unassigned subfamily M16A unassigned peptidases MER0050232 Sden_1533
ME M16 unassigned subfamily M16B unassigned peptidases MER0049166 Sden_1218
ME M16 unassigned subfamily M16B unassigned peptidases MER0071585 Sden_3486
MF M17 M17.003 PepA aminopeptidase MER0071515 pepA Sden_0871
MF M17 M17.004 PepB aminopeptidase MER0071577 Sden_3168
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0049173 Sden_1553
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0071490 pepQ Sden_0016
MG M24 unassigned subfamily M24B unassigned peptidases MER0049182 Sden_0888
MG M24 unassigned subfamily M24B unassigned peptidases MER0049183 Sden_0887
MH M20 M20.007 Xaa-His dipeptidase MER0049152 Sden_1011
MH M20 unassigned subfamily M20A unassigned peptidases MER0052502 dapE Sden_1814
MH M20 unassigned family M20D unassigned peptidases MER0049159 Sden_3487
MH M28 non-peptidase homologue family M28 non-peptidase homologues MER0049189 Sden_3608
MH M28 unassigned subfamily M28D unassigned peptidases MER0049139 Sden_2728
MH M28 unassigned family M28 unassigned peptidases MER0071544 Sden_1839
MH M28 unassigned family M28 unassigned peptidases MER0071562 Sden_2401
MH M28 unassigned family M28 unassigned peptidases MER0071581 Sden_3316
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0071513 Sden_0751
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0071541 pyrC Sden_1679
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868157 Sden_3129
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0071488 Sden_0011
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0071491 Sden_0032
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0071569 Sden_2704
MJ M38 unassigned family M38 unassigned peptidases MER0071494 hutI Sden_0081
MJ M38 unassigned family M38 unassigned peptidases MER0071575 Sden_3036
MM M50 unassigned subfamily M50B unassigned peptidases MER0049201 Sden_2980
MM M50 unassigned subfamily M50B unassigned peptidases MER0071536 Sden_1561
MO M23 M23.002 staphylolysin MER0049193 Sden_2622
MO M23 M23.009 Mername-AA292 peptidase MER0049186 Sden_0676
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0049157 Sden_2504
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049145 Sden_3699
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049180 Sden_2378
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0049191 Sden_1203
MO M23 unassigned subfamily M23B unassigned peptidases MER0049163 Sden_2811
MO M23 unassigned subfamily M23B unassigned peptidases MER0071495 Sden_0362
MS M75 unassigned family M75 unassigned peptidases MER0071512 Sden_0722
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0049195 Sden_3327
MU M103 M103.UNW family M103 non-peptidase homologues MER0049206 Sden_3067
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327224
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327265
NB N6 non-peptidase homologue family N6 non-lyase homologues MER0912392 Sden_1353
NB N6 unassigned family N6 unassigned peptide lyases MER0405724 Sden_0043
PA S1 S01.275 DegS peptidase MER0049188 Sden_0503
PA S1 unassigned subfamily S1B unassigned peptidases MER0071557 Sden_2175
PA S1 unassigned subfamily S1C unassigned peptidases MER0071507 Sden_0504
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0071508 Sden_0520
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0071511 Sden_0684
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0071534 Sden_1490
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0071600 Sden_3771
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0071570 Sden_2790
PB C44 C44.976 AsnB protein MER0071587 Sden_3533
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0071552 Sden_2075
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0071597 Sden_3743
PB C44 unassigned family C44 unassigned peptidases MER0071542 Sden_1765
PB C44 unassigned family C44 unassigned peptidases MER0071599 Sden_3769
PB C59 unassigned family C59 unassigned peptidases MER0071505 Sden_0442
PB S45 S45.003 cephalosporin C acylase precursor MER0071596 Sden_3735
PB T1 T01.007 CodW component of CodWX peptidase MER0049196 hslV Sden_3361
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0071540 Sden_1655
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0071509 Sden_0625
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0071579 Sden_3196
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0071563 Sden_2451
PC C26 C26.961 PuuD protein MER0071574 Sden_3033
PC C26 C26.964 CTP synthetase MER0448936 pyrG Sden_1195
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0071538 hisH Sden_1614
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0071525 guaA Sden_1270
PC C26 unassigned family C26 unassigned peptidases MER0441834 carA Sden_0995
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0071526 purL Sden_1273
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0071530 Sden_1386
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0071572 Sden_2844
PC S51 S51.001 dipeptidase E MER0071556 pepE Sden_2131
SB S8 S08.050 secreted peptidase A MER0049150 Sden_2868
SB S8 S08.050 secreted peptidase A MER0049151 Sden_1016
SB S8 S08.125 AspA (Aeromonas sobria)-type peptidase MER0049204 Sden_3045
SB S8 S08.130 MCP-01 peptidase MER0049207 Sden_3093
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1284405
SB S8 unassigned subfamily S8A unassigned peptidases MER0049142 Sden_1409
SB S8 unassigned subfamily S8A unassigned peptidases MER0049154 Sden_3290
SB S8 unassigned subfamily S8A unassigned peptidases MER0049190 Sden_3671
SB S8 unassigned subfamily S8A unassigned peptidases MER0049199 Sden_0567
SB S8 unassigned subfamily S8A unassigned peptidases MER0049205 Sden_3050
SB S8 unassigned subfamily S8B unassigned peptidases MER1290123
SC S9 S09.012 dipeptidyl-peptidase 5 MER0049143 Sden_1911
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0071598 Sden_3766
SC S9 S09.941 highly similar to acyl-protein thioesterase 1 (Homo sapiens) MER0209235 Sden_2138
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0214914 Sden_3221
SC S9 S09.A47 aes protein (acetyl esterase) (Escherichi coli) MER0071582 Sden_3322
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214997 Sden_0242
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213219 Sden_2085
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0071576 Sden_3046
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213849 Sden_3719
SC S9 unassigned subfamily S9A unassigned peptidases MER0049202 Sden_2985 Sden_2985
SC S9 unassigned subfamily S9A unassigned peptidases MER0049168 Sden_0322 Sden_0322
SC S9 unassigned subfamily S9A unassigned peptidases MER0071573 Sden_2940
SC S9 unassigned subfamily S9B unassigned peptidases MER0049162 Sden_0280
SC S9 unassigned subfamily S9B unassigned peptidases MER0049174 Sden_3195
SC S9 unassigned subfamily S9C unassigned peptidases MER0071590 Sden_3599
SC S9 unassigned family S9 unassigned peptidases MER0049192 Sden_2560
SC S9 unassigned family S9 unassigned peptidases MER0071533 Sden_1441
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021397 Sden_3195
SC S33 S33.010 SCO7095-type peptidase MER0071550 Sden_1987
SC S33 S33.010 SCO7095-type peptidase MER0071592 Sden_3669
SC S33 S33.A46 YheT protein (Escherichia coli) MER0071578 Sden_3186
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0071527 Sden_1370
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0071543 Sden_1812
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0071553 Sden_2086
SC S33 unassigned family S33 unassigned peptidases MER0071493 Sden_0068
SC S33 unassigned family S33 unassigned peptidases MER0208853 Sden_1033
SC S33 unassigned family S33 unassigned peptidases MER0071520 Sden_1067
SC S33 unassigned family S33 unassigned peptidases MER0071522 Sden_1108
SC S33 unassigned family S33 unassigned peptidases MER0071524 Sden_1212
SC S33 unassigned family S33 unassigned peptidases MER0071539 Sden_1624
SC S33 unassigned family S33 unassigned peptidases MER0071561 Sden_2227
SC S33 unassigned family S33 unassigned peptidases MER0071586 bioH Sden_3530
SE S11 S11.002 murein-DD-endopeptidase MER0049156 Sden_1095
SE S11 unassigned family S11 unassigned peptidases MER0071514 Sden_0851
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0071523 Sden_1171
SE S12 unassigned family S12 unassigned peptidases MER0071506 Sden_0471
SE S12 unassigned family S12 unassigned peptidases MER0071510 Sden_0675
SE S12 unassigned family S12 unassigned peptidases MER0071588 Sden_3534
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0049148 Sden_1778
SF S24 S24.001 repressor LexA MER0049172 lexA Sden_3515
SF S24 S24.003 UmuD protein MER0049175 Sden_3236
SF S24 unassigned family S24 unassigned peptidases MER0049177 Sden_3268
SF S26 S26.001 signal peptidase I MER0049146 Sden_2462
SF S26 S26.001 signal peptidase I MER0049165 Sden_2767
SJ S16 S16.001 Lon-A peptidase MER0049147 Sden_2493
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0071519 Sden_1035
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0071564 Sden_2464
SJ S16 unassigned family S16 unassigned peptidases MER0049208 Sden_3103
SK S14 S14.001 peptidase Clp (type 1) MER0071566 clpP Sden_2495
SK S14 unassigned family S14 unassigned peptidases MER0049176 Sden_3249
SK S41 S41.001 C-terminal processing peptidase-1 MER0049161 Sden_1722
SK S41 S41.001 C-terminal processing peptidase-1 MER0115502 Sden_1722
SK S41 S41.004 C-terminal processing peptidase-3 MER0049144 Sden_3700
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0049181 Sden_0954
SK S41 unassigned subfamily S41A unassigned peptidases MER1345323
SK S49 unassigned subfamily S49B unassigned peptidases MER0071546 Sden_1901
SK S49 unassigned subfamily S49B unassigned peptidases MER0071559 Sden_2190
SK S49 unassigned subfamily S49B unassigned peptidases MER0071565 Sden_2471
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0071591 Sden_3618
ST S54 unassigned family S54 unassigned peptidases MER0071551 Sden_2016
U- U32 U32.002 collagenase (Helicobacter-type) MER0049169 Sden_1045
U- U32 U32.003 collagenase (Salmonella-type) MER0049185 Sden_0726
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0049171 Sden_1038
U- U32 unassigned family U32 unassigned peptidases MER0049170 Sden_1039

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
G5 significant presence (2 homologues)
M14 significant decrease in homologues (2 homologues)
M17 significant decrease in homologues (2 homologues)

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