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Chlorobium phaeobacteroides

Taxonomy
Taxonomy database identifier: 1096
Superkingdom Bacteria
Phylum Chlorobi
Class Chlorobia
Order Chlorobiales
Family Chlorobiaceae
Genus Chlorobium
Species phaeobacteroides
Peptidase View peptidase sequences from Chlorobium phaeobacteroides
Count of known and putative peptidases: 124, non-peptidase homologues 38
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0050991 lspA Cpha266_0707
AC A8 unassigned family A8 unassigned peptidases MER0051393 lspA Cphamn1_1775
AE A31 A31.002 HyaD peptidase MER0055438 Cpha266_0975
AE A31 A31.002 HyaD peptidase MER0055455 Cphamn1_1590
CA C1 unassigned subfamily C1B unassigned peptidases MER0051376 Cphamn1_0109
CA C1 unassigned subfamily C1B unassigned peptidases MER0051006 Cpha266_2670
CA C1 unassigned subfamily C1B unassigned peptidases MER0101310
CA C39 C39.005 colicin V processing peptidase MER0051397 Cphamn1_2331
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0073544 Cpha266_1843
CD C14 unassigned subfamily C14B unassigned peptidases MER0073533 Cpha266_1254
CD C14 unassigned subfamily C14B unassigned peptidases MER0143541 Cphamn1_1553
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244076 Cphamn1_0071
CL C82 unassigned subfamily C82A unassigned peptidases MER0739644 Cpha266_0947
CL C82 unassigned subfamily C82A unassigned peptidases MER0461370 Cphamn1_1503
CO C40 C40.006 PgpA peptidase MER0073536 Cpha266_1344
CO C40 C40.006 PgpA peptidase MER0073573 Cpha266_2584
CO C40 C40.006 PgpA peptidase MER0094246 Cphamn1_0230
CO C40 C40.006 PgpA peptidase MER0165137 Cphamn1_2446
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0094245
G- G5 G05.A04 At3g26085 (Arabidopsis thaliana) MER0073508 Cpha266_0361
G- G5 G05.A04 At3g26085 (Arabidopsis thaliana) MER0125960 Cphamn1_0393
G- G5 unassigned family G5 unassigned peptidases MER0910893 Cpha266_0281
G- G5 unassigned family G5 unassigned peptidases MER0912427 Cpha266_1934
G- G5 unassigned family G5 unassigned peptidases MER0936205 Cphamn1_0785
MA M3 unassigned subfamily M3A unassigned peptidases MER0103266
MA M12 unassigned subfamily M12A unassigned peptidases MER0050992 Cpha266_0056
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0050981 ftsH1 Cpha266_0426
MA M41 unassigned family M41 unassigned peptidases MER0082568 ftsH1 Cphamn1_0100
MA M41 unassigned family M41 unassigned peptidases MER0051007 ftsH Cpha266_2678
MA M41 unassigned family M41 unassigned peptidases MER0082570 ftsH2 Cphamn1_1990
MA M48 M48.002 HtpX peptidase MER0050982 htpX Cpha266_1580
MA M48 M48.002 HtpX peptidase MER0051389 htpX Cphamn1_2395
MA M48 unassigned subfamily M48A unassigned peptidases MER0051000 Cpha266_1902
MA M48 unassigned subfamily M48A unassigned peptidases MER0082566
MA M48 unassigned subfamily M48A unassigned peptidases MER0082573 Cphamn1_1728
MA M48 unassigned subfamily M48C unassigned peptidases MER0051381
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0904534 Cpha266_0042
MA M78 unassigned family M78 unassigned peptidases MER0909767 Cpha266_1505
MA M78 unassigned family M78 unassigned peptidases MER0908926 Cpha266_1951
MD M15 unassigned subfamily M15D unassigned peptidases MER0051364
MD M15 unassigned subfamily M15D unassigned peptidases MER0050997 Cpha266_1343
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0044017 Cpha266_2025
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0051361
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0043969 Cphamn1_2031
ME M16 unassigned subfamily M16B unassigned peptidases MER0050984 Cpha266_2025
ME M16 unassigned subfamily M16B unassigned peptidases MER0050990 Cpha266_2291
ME M16 unassigned subfamily M16B unassigned peptidases MER0051384 Cphamn1_2031
ME M16 unassigned subfamily M16B unassigned peptidases MER0051373 Cphamn1_2188
MF M17 unassigned family M17 unassigned peptidases MER0073539 pepA Cpha266_1537
MF M17 unassigned family M17 unassigned peptidases MER0082567
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0051001 Cpha266_2518
MG M24 unassigned subfamily M24A unassigned peptidases MER0051386 Cphamn1_2275
MG M24 unassigned subfamily M24A unassigned peptidases MER0051003 Cpha266_2402
MG M24 unassigned subfamily M24B unassigned peptidases MER0051008 Cpha266_0585
MG M24 unassigned subfamily M24B unassigned peptidases MER0051388 Cphamn1_0604
MH M20 M20.012 Pep581 peptidase MER0050989 Cpha266_1680
MH M20 M20.012 Pep581 peptidase MER0051377 Cphamn1_1387
MH M20 unassigned family M20D unassigned peptidases MER0050996 Cpha266_1330
MH M20 unassigned family M20D unassigned peptidases MER0051366
MH M20 unassigned family M20D unassigned peptidases MER0051395 Cphamn1_1324
MH M28 unassigned subfamily M28F unassigned peptidases MER0051363
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0073535 Cpha266_1336
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0126334 Cphamn1_0060
MM M50 unassigned subfamily M50B unassigned peptidases MER0895308 Cpha266_1573
MM M50 unassigned subfamily M50B unassigned peptidases MER0073510 Cpha266_0506
MM M50 unassigned subfamily M50B unassigned peptidases MER0051399 Cphamn1_0500
MM M50 unassigned subfamily M50B unassigned peptidases MER0896972 Cphamn1_0005
MM M50 unassigned family M50 unassigned peptidases MER0073577 Cpha266_2681
MM M50 unassigned family M50 unassigned peptidases MER0126333 Cphamn1_0097
MO M23 M23.009 Mername-AA292 peptidase MER0051387 Cphamn1_2213
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0050985 Cpha266_0808
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0051359
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0051394
MO M23 unassigned subfamily M23B unassigned peptidases MER0051391 Cphamn1_0236
MO M23 unassigned subfamily M23B unassigned peptidases MER0051009 Cpha266_0535
MO M23 unassigned subfamily M23B unassigned peptidases MER0051367
MO M23 unassigned subfamily M23B unassigned peptidases MER0051390 Cphamn1_2508
MO M23 unassigned subfamily M23B unassigned peptidases MER0051398 Cphamn1_0539
MP M67 unassigned subfamily M67B unassigned peptidases MER0907535 Cpha266_0529
MP M67 unassigned subfamily M67B unassigned peptidases MER0164581 Cphamn1_0533
MP M67 unassigned subfamily M67B unassigned peptidases MER0164655 Cphamn1_0646
PA S1 unassigned subfamily S1C unassigned peptidases MER0050998 Cpha266_1855
PA S1 unassigned subfamily S1C unassigned peptidases MER0051380
PA S1 unassigned subfamily S1E unassigned peptidases MER0217886 Cpha266_2433
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0073548 Cphamn1_1885
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305772 Cpha266_1989
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0073514 Cpha266_0628
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458047 Cphamn1_0672
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0126030 Cphamn1_0102
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0162391 Cphamn1_1899
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0073574 Cpha266_2605
PB C44 unassigned family C44 unassigned peptidases MER0073576 Cpha266_2676
PB C44 unassigned family C44 unassigned peptidases MER0458048 Cphamn1_1685
PB C69 unassigned family C69 unassigned peptidases MER0051365
PB T1 unassigned subfamily T1B unassigned peptidases MER0051372 hslV Cphamn1_1439
PB T1 unassigned subfamily T1B unassigned peptidases MER0050987 hslV Cpha266_1546
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0073550 Cpha266_2037
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435776 Cphamn1_2048
PC C26 C26.957 GMP synthase MER0073506 guaA Cpha266_0300
PC C26 C26.957 GMP synthase MER0125988 guaA Cphamn1_0342
PC C26 C26.964 CTP synthetase MER0073575 pyrG Cpha266_2661
PC C26 C26.964 CTP synthetase MER0126021 pyrG Cphamn1_0127
PC C26 unassigned family C26 unassigned peptidases MER0073509 Cpha266_0491
PC C26 unassigned family C26 unassigned peptidases MER0073517 Cpha266_0839
PC C26 unassigned family C26 unassigned peptidases MER0073542 Cpha266_1655
PC C26 unassigned family C26 unassigned peptidases MER0073547 Cpha266_1960
PC C26 unassigned family C26 unassigned peptidases MER0125922 Cphamn1_0474
PC C26 unassigned family C26 unassigned peptidases MER0448888 Cphamn1_0768
PC C26 unassigned family C26 unassigned peptidases MER0439953 carA Cphamn1_2349
PC C26 unassigned family C26 unassigned peptidases MER0439913 carA Cpha266_2459
PE T5 T05.002 ArgJ protein (archea) MER0073534 argJ Cpha266_1321
PE T5 T05.002 ArgJ protein (archea) MER0141808 argJ Cphamn1_1336
SC S9 unassigned subfamily S9A unassigned peptidases MER0073528 Cpha266_1010
SC S9 unassigned subfamily S9A unassigned peptidases MER0082571 Cphamn1_1041
SC S9 unassigned subfamily S9B unassigned peptidases MER0073526 Cpha266_0986
SC S9 unassigned family S9 unassigned peptidases MER0051370
SC S9 unassigned family S9 unassigned peptidases MER0211520 Cpha266_1005
SC S33 unassigned family S33 unassigned peptidases MER0073505 Cpha266_0185
SC S33 unassigned family S33 unassigned peptidases MER0073507 Cpha266_0302
SC S33 unassigned family S33 unassigned peptidases MER0073519 Cpha266_0919
SC S33 unassigned family S33 unassigned peptidases MER0073537 Cpha266_1410
SC S33 unassigned family S33 unassigned peptidases MER0073540 Cpha266_1595
SC S33 unassigned family S33 unassigned peptidases MER0073541 Cpha266_1637
SC S33 unassigned family S33 unassigned peptidases MER0073543 metX Cpha266_1766
SC S33 unassigned family S33 unassigned peptidases MER0073546 Cpha266_1941
SC S33 unassigned family S33 unassigned peptidases MER0073551 Cpha266_2090
SC S33 unassigned family S33 unassigned peptidases MER0073552 Cpha266_2276
SC S33 unassigned family S33 unassigned peptidases MER0073572 Cpha266_2528
SC S33 unassigned family S33 unassigned peptidases MER0125995 Cphamn1_0276
SC S33 unassigned family S33 unassigned peptidases MER0125985 Cphamn1_0344
SE S11 S11.004 K15-type DD-transpeptidase MER0082572 Cphamn1_2237
SE S11 S11.004 K15-type DD-transpeptidase MER0073538 Cpha266_1420
SE S12 S12.950 esterase EstB MER0073515 Cpha266_0660
SE S12 S12.950 esterase EstB MER0116982 Cphamn1_1874
SF S24 S24.003 UmuD protein MER0051383 Cphamn1_0919
SF S24 S24.003 UmuD protein MER0050988 Cpha266_1032
SF S26 S26.014 TraF peptidase MER0141086 Cphamn1_0684
SF S26 unassigned subfamily S26A unassigned peptidases MER0050999 Cpha266_1858
SF S26 unassigned subfamily S26A unassigned peptidases MER0051358
SF S26 unassigned subfamily S26A unassigned peptidases MER0051379 Cphamn1_0902
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0073527 Cpha266_0996
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474568 Cphamn1_1443
SJ S16 unassigned family S16 unassigned peptidases MER0051374 Cphamn1_2123
SK S14 S14.001 peptidase Clp (type 1) MER0050983 clpP Cpha266_2030
SK S14 S14.001 peptidase Clp (type 1) MER0051385 clpP Cphamn1_2037
SK S41 S41.001 C-terminal processing peptidase-1 MER0050994 Cpha266_1304
SK S41 S41.001 C-terminal processing peptidase-1 MER0050995 Cpha266_1328
SK S41 S41.001 C-terminal processing peptidase-1 MER0051396 Cphamn1_1326
SK S41 S41.004 C-terminal processing peptidase-3 MER0051368
SK S41 unassigned subfamily S41A unassigned peptidases MER0051371 Cphamn1_1287
SK S41 unassigned subfamily S41A unassigned peptidases MER0050986 Cpha266_1529
SK S41 unassigned subfamily S41A unassigned peptidases MER0050993 Cpha266_0042
SK S41 unassigned subfamily S41A unassigned peptidases MER0051378 Cphamn1_0021
SK S41 unassigned subfamily S41A unassigned peptidases MER1346093
SK S49 unassigned subfamily S49A unassigned peptidases MER0073511 Cpha266_0556
SK S49 unassigned subfamily S49A unassigned peptidases MER1352129
SK S49 unassigned subfamily S49B unassigned peptidases MER0073529 Cpha266_1160
SK S49 unassigned subfamily S49B unassigned peptidases MER0082574 Cphamn1_0560
SK S49 unassigned subfamily S49C unassigned peptidases MER1072187 Cphamn1_1169
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0082569 Cphamn1_0029
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0073504 Cpha266_0047
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0051357
ST S54 S54.025 At5g25752 rhomboid peptidase MER0109321
ST S54 S54.025 At5g25752 rhomboid peptidase MER0073579 Cpha266_2735
U- U32 U32.001 collagenase (Porphyromonas-type) MER0051004 Cpha266_2165
U- U32 U32.001 collagenase (Porphyromonas-type) MER0051369
U- U32 U32.001 collagenase (Porphyromonas-type) MER0051375 Cphamn1_2127

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from family Chlorobiaceae
Family Comment
C26 lineage specific expansion (14 homologues)
C40 lineage specific expansion (5 homologues)
C44 lineage specific expansion (9 homologues)
C69 significant presence (1 homologues)
G5 lineage specific expansion (5 homologues)
M3 significant presence (1 homologues)
M12 significant presence (1 homologues)
M20 lineage specific expansion (5 homologues)
M23 lineage specific expansion (9 homologues)
M24 lineage specific expansion (5 homologues)
M28 significant presence (1 homologues)
M41 lineage specific expansion (4 homologues)
M48 lineage specific expansion (6 homologues)
M50 lineage specific expansion (6 homologues)
M61 significant presence (1 homologues)
S33 lineage specific expansion (13 homologues)
S41 lineage specific expansion (9 homologues)
S49 lineage specific expansion (5 homologues)

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Page created 8-September-2023

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