Acidovorax radicis

Taxonomy
Taxonomy database identifier: 758826
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Burkholderiales
Family Comamonadaceae
Genus Acidovorax
Species radicis
Peptidase View peptidase sequences from Acidovorax radicis
Count of known and putative peptidases: 56, non-peptidase homologues 9
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0234390
AC A8 unassigned family A8 unassigned peptidases MER0324417
AD A24 A24.001 type 4 prepilin peptidase 1 MER0262067
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292498
CO C40 C40.006 PgpA peptidase MER0377446
CO C40 C40.006 PgpA peptidase MER0376873
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335589 pepN
MA M3 M03.004 oligopeptidase A MER0339980
MA M41 M41.001 FtsH peptidase MER0300735
MA M41 unassigned family M41 unassigned peptidases MER0364146
MA M48 M48.002 HtpX peptidase MER0296246
MA M48 unassigned subfamily M48A unassigned peptidases MER0295624
MA M48 unassigned subfamily M48B unassigned peptidases MER0349504
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0310291
MA M90 unassigned family M90 unassigned peptidases MER0321645
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0468947
MC M14 unassigned family M14 unassigned peptidases MER0469050
ME M16 M16.019 YMXG peptidase MER0390873
MF M17 M17.003 PepA aminopeptidase MER0289656
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0319053
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0319104
MG M24 unassigned subfamily M24B unassigned peptidases MER0319293
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0474734
MH M20 unassigned subfamily M20A unassigned peptidases MER1206931
MH M20 unassigned subfamily M20A unassigned peptidases MER0302639
MH M20 unassigned family M20D unassigned peptidases MER0372279
MH M20 unassigned family M20D unassigned peptidases MER0372697
MH M20 unassigned family M20D unassigned peptidases MER0372539
MH M20 unassigned family M20D unassigned peptidases MER0303946
MH M20 unassigned family M20D unassigned peptidases MER0304160
MH M20 unassigned family M20 unassigned peptidases MER0302782
MH M20 unassigned family M20 unassigned peptidases MER0472389
MH M20 unassigned family M20 unassigned peptidases MER0369666
MH M28 unassigned family M28 unassigned peptidases MER0271950
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478301
MO M23 unassigned subfamily M23B unassigned peptidases MER0479109
MO M23 unassigned subfamily M23B unassigned peptidases MER0388249
MO M23 unassigned subfamily M23B unassigned peptidases MER0388043
MO M23 unassigned subfamily M23B unassigned peptidases MER0387389
MS M75 unassigned family M75 unassigned peptidases MER0313171
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0329695
MU M103 M103.UNW family M103 non-peptidase homologues MER0241602
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405756
PA S1 S01.280 lysyl endopeptidase (bacteria) MER0204836
PA S1 S01.453 MucD peptidase MER0407387
PA S1 S01.477 AlgW peptidase MER0327700
PA S1 non-peptidase homologue subfamily S1D non-peptidase homologues MER1275562
PA S1 unassigned subfamily S1C unassigned peptidases MER0406444
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456761
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459932
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456762
PB S45 S45.003 cephalosporin C acylase precursor MER0312222
PB T1 T01.006 HslV component of HslUV peptidase MER0323622
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307114
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0379172
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0378929
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379691
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379805
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436517
PC C26 C26.957 GMP synthase MER0442712 guaA
PC C26 C26.964 CTP synthetase MER0449325 pyrG
PC C26 unassigned family C26 unassigned peptidases MER0440260
PC C26 unassigned family C26 unassigned peptidases MER0446407 hisH
PC C26 unassigned family C26 unassigned peptidases MER0449702
PE T5 T05.001 ornithine acetyltransferase precursor MER0307707
SC S33 unassigned family S33 unassigned peptidases MER0490671
SE S11 S11.002 murein-DD-endopeptidase MER0352567
SE S11 unassigned family S11 unassigned peptidases MER0350880
SE S12 unassigned family S12 unassigned peptidases MER0354759
SE S12 unassigned family S12 unassigned peptidases MER0354332
SE S12 unassigned family S12 unassigned peptidases MER0354576
SE S12 unassigned family S12 unassigned peptidases MER0355894
SE S12 unassigned family S12 unassigned peptidases MER0354246 AradN_19015
SE S12 unassigned family S12 unassigned peptidases MER0355166
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0298679
SF S24 S24.001 repressor LexA MER0304453
SF S24 S24.003 UmuD protein MER0375727
SF S26 S26.001 signal peptidase I MER0264830
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0333306
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0322605
SJ S16 S16.001 Lon-A peptidase MER0299794
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0478280
SJ S16 unassigned family S16 unassigned peptidases MER0472037
SK S14 S14.001 peptidase Clp (type 1) MER0299220
SK S14 unassigned family S14 unassigned peptidases MER0359623
SK S41 S41.004 C-terminal processing peptidase-3 MER0337427
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0399172
U- U32 unassigned family U32 unassigned peptidases MER0403378
U- U32 unassigned family U32 unassigned peptidases MER0404116
U- U32 unassigned family U32 unassigned peptidases MER0404189

GENOME ANALYSIS: Comparison with 31 completely sequenced genomes from family Comamonadaceae
Family Comment
M16 significant decrease in homologues (1 homologues)
M28 significant presence (1 homologues)
M48 significant decrease in homologues (3 homologues)
S33 significant decrease in homologues (1 homologues)