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information

marine gamma proteobacterium HTCC2143

Taxonomy
Taxonomy database identifier: 247633
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Common Name marine gamma proteobacterium HTCC2143
Peptidase View peptidase sequences from marine gamma proteobacterium HTCC2143
Count of known and putative peptidases: 61, non-peptidase homologues 21
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241923 GP2143_12496
AC A8 unassigned family A8 unassigned peptidases MER0087734 GP2143_10357
AC A8 unassigned family A8 unassigned peptidases MER1154833
AD A24 A24.001 type 4 prepilin peptidase 1 MER0087731 GP2143_00642
AD A24 unassigned subfamily A24A unassigned peptidases MER1156510
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244149 GP2143_09015 GP2143_09015
CL C82 unassigned subfamily C82A unassigned peptidases MER0463501 GP2143_09020
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0087743 GP2143_04715
MA M3 M03.004 oligopeptidase A MER0087758 GP2143_15791
MA M3 M03.004 oligopeptidase A MER1185257
MA M3 unassigned subfamily M3A unassigned peptidases MER0087744 GP2143_05395
MA M3 unassigned subfamily M3A unassigned peptidases MER1186040
MA M41 M41.001 FtsH peptidase MER0105495 ftsH2 GP2143_00512
MA M41 unassigned family M41 unassigned peptidases MER0087746 GP2143_05740
MA M48 M48.002 HtpX peptidase MER0117540 htpX GP2143_11484
MA M48 unassigned subfamily M48B unassigned peptidases MER0087757 GP2143_15326
MA M48 unassigned subfamily M48C unassigned peptidases MER0889396 GP2143_08489
MA M48 unassigned subfamily M48C unassigned peptidases MER0087755 GP2143_14971
MA M90 unassigned family M90 unassigned peptidases MER0321638
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0167767 GP2143_01925
ME M16 unassigned subfamily M16A unassigned peptidases MER0087742 GP2143_08474
ME M16 unassigned subfamily M16A unassigned peptidases MER0653186
ME M16 unassigned subfamily M16B unassigned peptidases MER0087727 GP2143_01925
ME M16 unassigned subfamily M16C unassigned peptidases MER0087736 GP2143_03623
MF M17 M17.003 PepA aminopeptidase MER0087739 pepA GP2143_08134
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0087733 GP2143_02224
MG M24 M24.004 aminopeptidase P (bacteria) MER0087759 GP2143_16536
MG M24 unassigned subfamily M24A unassigned peptidases MER0865907
MG M24 unassigned subfamily M24B unassigned peptidases MER0985885
MH M18 unassigned family M18 unassigned peptidases MER0087740 GP2143_08169
MH M18 unassigned family M18 unassigned peptidases MER1021510
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0803017 GP2143_09320
MH M20 unassigned subfamily M20A unassigned peptidases MER0091984 GP2143_15926
MH M20 unassigned subfamily M20A unassigned peptidases MER0091985 GP2143_04470
MH M20 unassigned subfamily M20A unassigned peptidases MER0794048 GP2143_04545
MH M20 unassigned subfamily M20A unassigned peptidases MER0091986 dapE GP2143_02194
MH M20 unassigned family M20D unassigned peptidases MER0091983 GP2143_13361
MH M28 unassigned subfamily M28D unassigned peptidases MER0087737 GP2143_03658
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0093647 GP2143_01740
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863329 GP2143_12761
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868813 mtaD
MM M50 unassigned subfamily M50B unassigned peptidases MER0893382 GP2143_02264
MO M23 M23.011 YebA peptidase MER0088937 GP2143_18251
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0088936 GP2143_03134
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0087724 GP2143_00075
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478889 GP2143_17026
MO M23 unassigned subfamily M23B unassigned peptidases MER0088935 GP2143_10847
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0278932 GP2143_07634
PA S1 unassigned subfamily S1C unassigned peptidases MER0087729 GP2143_00247
PA S1 unassigned subfamily S1C unassigned peptidases MER0087738 GP2143_07254
PA S1 unassigned subfamily S1C unassigned peptidases MER1271336
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0123745 GP2143_04790
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458793
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0167028
PB C44 unassigned family C44 unassigned peptidases MER0458794
PB S45 S45.002 cephalosporin acylase precursor MER1064549 GP2143_17631
PB S45 S45.002 cephalosporin acylase precursor MER0109506 GP2143_17611
PB S45 S45.004 acyl-homoserine lactone acylase MER1064222 GP2143_14871
PB T1 T01.980 bacterial proteasome, alpha subunit MER0323568 hslV
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0091340 GP2143_01027
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436010
PC C26 C26.964 CTP synthetase MER0447426
PC C26 C26.A24 M106.4b g.p. (Caenorhabditis elegans) MER0442852
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0441389
PC C26 unassigned family C26 unassigned peptidases MER0444664
PC C26 unassigned family C26 unassigned peptidases MER0449125
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0186182 GP2143_02714
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0734351 GP2143_04153
PE T5 T05.001 ornithine acetyltransferase precursor MER0091341 argJ GP2143_10837
SB S8 unassigned subfamily S8A unassigned peptidases MER0087725 GP2143_11117
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0209970 GP2143_16156
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001920 GP2143_04585
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213318
SC S9 unassigned subfamily S9C unassigned peptidases MER0087753 GP2143_13781
SC S33 S33.001 prolyl aminopeptidase MER0087754 GP2143_14806
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210893
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209789
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214323
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209016
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210188
SC S33 unassigned family S33 unassigned peptidases MER0087728 GP2143_01940
SC S33 unassigned family S33 unassigned peptidases MER0126210 GP2143_17836
SC S33 unassigned family S33 unassigned peptidases MER1340486
SC S33 unassigned family S33 unassigned peptidases MER0209450
SC S33 unassigned family S33 unassigned peptidases MER0210445
SC S33 unassigned family S33 unassigned peptidases MER0213242
SC S33 unassigned family S33 unassigned peptidases MER0209357
SE S11 unassigned family S11 unassigned peptidases MER0087732 GP2143_00727
SE S11 unassigned family S11 unassigned peptidases MER1305847
SE S12 S12.950 esterase EstB MER0119470 GP2143_17936
SE S12 S12.950 esterase EstB MER0420669 GP2143_10692
SE S12 unassigned family S12 unassigned peptidases MER1028615 GP2143_12821
SE S12 unassigned family S12 unassigned peptidases MER1005775 GP2143_12891
SE S12 unassigned family S12 unassigned peptidases MER1011279 GP2143_04965
SE S12 unassigned family S12 unassigned peptidases MER0989291 GP2143_03848
SE S12 unassigned family S12 unassigned peptidases MER1011267 GP2143_09872
SE S12 unassigned family S12 unassigned peptidases MER0420359 GP2143_02964
SE S12 unassigned family S12 unassigned peptidases MER1010772 GP2143_09470
SE S12 unassigned family S12 unassigned peptidases MER1007270 GP2143_11232
SE S12 unassigned family S12 unassigned peptidases MER0143946 GP2143_13986
SE S12 unassigned family S12 unassigned peptidases MER0166767 GP2143_12731
SE S12 unassigned family S12 unassigned peptidases MER0355113 GP2143_17601
SE S12 unassigned family S12 unassigned peptidases MER0354859 GP2143_09917
SE S12 unassigned family S12 unassigned peptidases MER0355873 GP2143_10057
SE S12 unassigned family S12 unassigned peptidases MER0355847 GP2143_12236
SF S24 S24.001 repressor LexA MER0179858 lexA GP2143_07113
SF S24 unassigned family S24 unassigned peptidases MER1328835
SF S26 S26.001 signal peptidase I MER0087741 GP2143_08229
SF S26 unassigned subfamily S26A unassigned peptidases MER1335291
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0087756 GP2143_15031
SJ S16 unassigned family S16 unassigned peptidases MER0087726 GP2143_11147
SJ S16 unassigned family S16 unassigned peptidases MER0087750 GP2143_06405
SK S14 S14.001 peptidase Clp (type 1) MER0087751 clpP GP2143_06425
SK S14 unassigned family S14 unassigned peptidases MER1318053
SK S41 S41.001 C-terminal processing peptidase-1 MER0087748 GP2143_06190
SK S41 S41.004 C-terminal processing peptidase-3 MER0087760 GP2143_17021
SK S41 unassigned subfamily S41A unassigned peptidases MER1347994
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0087745 GP2143_05445
SK S49 unassigned subfamily S49A unassigned peptidases MER1349131
SK S49 unassigned subfamily S49B unassigned peptidases MER0087735 GP2143_10622
SK S49 unassigned subfamily S49C unassigned peptidases MER1071950 GP2143_06165
ST S54 S54.028 rhomboid peptidase (Pseudomonas sp.) MER0112988 GP2143_04700
U- U32 U32.003 collagenase (Salmonella-type) MER0087747 GP2143_05855

GENOME ANALYSIS: Comparison with 841 completely sequenced genomes from class Gammaproteobacteria
Family Comment
A32 significant presence (1 homologues)
M18 significant presence (2 homologues)
T5 significant presence (1 homologues)

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