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MEROPS SUBMISSIONS

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Bifidobacterium dentium

Taxonomy
Taxonomy database identifier: 1689
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Bifidobacteriales
Family Bifidobacteriaceae
Genus Bifidobacterium
Species dentium
Peptidase View peptidase sequences from Bifidobacterium dentium
Count of known and putative peptidases: 79, non-peptidase homologues 28
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0193017 lspA BDP_1588
AD A24 non-peptidase homologue subfamily A24A non-peptidase homologues MER0638138 BBDE_0981/BDP_1024/HMPREF0168_0804
CA C1 unassigned subfamily C1B unassigned peptidases MER0140057 pepC HMPREF0168_0523
CA C1 unassigned subfamily C1B unassigned peptidases MER1166805
CA C1 unassigned subfamily C1B unassigned peptidases MER0179287 pepC2 HMPREF0168_1551
CF C15 non-peptidase homologue family C15 non-peptidase homologues MER0139182 BIFDEN_00405
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0195299 BDP_0142
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0195303 BDP_0197
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0195356 BDP_1874
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0122092 BDP_2188
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0126672 BDP_2002
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0142431 BIFDEN_00232
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0143780 BDP_0278
CL C60 unassigned subfamily C60A unassigned peptidases MER0195293 BDP_0036
CL C60 unassigned subfamily C60A unassigned peptidases MER0329658 BDP_0278
CL C60 unassigned subfamily C60A unassigned peptidases MER0329765 HMPREF9003_1473
CL C60 unassigned subfamily C60A unassigned peptidases MER0329642 HMPREF9003_1935
CL C60 unassigned subfamily C60A unassigned peptidases MER0329552 HMPREF9003_0798
CL C82 unassigned subfamily C82A unassigned peptidases MER0195354 BDP_1809
CO C40 unassigned family C40 unassigned peptidases MER0179250 BDP_0524
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0195305 BDP_0288
G- G5 unassigned family G5 unassigned peptidases MER0195324 BDP_0989
G- G5 unassigned family G5 unassigned peptidases MER0912835 HMPREF0168_0497
MA M1 M01.009 aminopeptidase N (actinomycete-type) MER0195348 pepN BDP_1753
MA M13 non-peptidase homologue family M13 non-peptidase homologues MER0339451 HMPREF9003_0735
MA M13 unassigned family M13 unassigned peptidases MER0141508 pepO HMPREF9003_0736
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0179128 ftsH BDP_0549
MA M48 unassigned subfamily M48B unassigned peptidases MER0144881 htpX BDP_0064
MA M78 unassigned family M78 unassigned peptidases MER0909574 HMPREF0168_0493
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0136387 pepP BIFDEN_01643
MG M24 unassigned subfamily M24A unassigned peptidases MER0195318 map BDP_0634
MH M20 unassigned family M20D unassigned peptidases MER0195339 BDP_1382
MH M20 unassigned subfamily M20F unassigned peptidases MER0195335 BDP_1303
MH M20 unassigned family M20 unassigned peptidases MER0195308 dapE BDP_0343
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0195310 BDP_0473
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0195329 pyrC BDP_1092
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0195358 nagA1 BDP_2073
MJ M38 unassigned family M38 unassigned peptidases MER0195337 BDP_1339
PA S1 unassigned subfamily S1C unassigned peptidases MER0195296 BBDE_0052/BDP_0057 BDP_0057
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454683 purF
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0195328 BDP_1078
PB C44 C44.976 AsnB protein MER0195340 purF BDP_1512
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0179055 glmS BDP_0650
PB C44 unassigned family C44 unassigned peptidases MER0195359 BDP_2085
PB C44 unassigned family C44 unassigned peptidases MER0458933 asnB BIFDEN_01657
PB C59 C59.951 choloylglycine hydrolase MER0195332 cbh BDP_1106
PB C69 C69.001 dipeptidase A MER0276435 pepD HMPREF9003_1624
PB C69 C69.001 dipeptidase A MER0179410 pepD HMPREF9003_0059
PB C69 unassigned family C69 unassigned peptidases MER0195301 BDP_0184
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0195294 BDP_0037
PC C26 C26.957 GMP synthase MER0440669
PC C26 C26.959 TRP3 protein MER0436363 pabA
PC C26 C26.964 CTP synthetase MER0195326 pyrG BDP_1030
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0195342 hisH BDP_1579
PC C26 C26.A24 M106.4b g.p. (Caenorhabditis elegans) MER0195325 guaA BDP_1005
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0195357 pdxT BDP_1913
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0195302 BDP_0194
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0449395
PC C26 unassigned family C26 unassigned peptidases MER0195306 BDP_0316
PC C26 unassigned family C26 unassigned peptidases MER0195330 BDP_1100
PC C26 unassigned family C26 unassigned peptidases MER0195320 carA BIFDEN_00008
PC C26 unassigned family C26 unassigned peptidases MER0450971 BIFDEN_01233
PC C26 unassigned family C26 unassigned peptidases MER0449140
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0195319 purL BDP_0725
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0179335 BDP_0374
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0141987 HMPREF0168_1132
PE T5 unassigned family T5 unassigned peptidases MER0195334 argJ BDP_1295
SB S8 unassigned subfamily S8A unassigned peptidases MER0195341 BDP_1572
SB S8 unassigned subfamily S8A unassigned peptidases MER0138992 BDP_1577
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0195336 BDP_1316
SC S9 unassigned subfamily S9A unassigned peptidases MER0142608 ptrB BDP_1806
SC S9 unassigned subfamily S9B unassigned peptidases MER0192269 BDP_0045
SC S9 unassigned family S9 unassigned peptidases MER0195312 BDP_0503
SC S9 unassigned family S9 unassigned peptidases MER0195323 BDP_0844
SC S9 unassigned family S9 unassigned peptidases MER0195327 BDP_1071
SC S9 unassigned family S9 unassigned peptidases MER0195345 BDP_1615
SC S9 unassigned family S9 unassigned peptidases MER0195347 BDP_1634
SC S9 unassigned family S9 unassigned peptidases MER0195360 BDP_2115
SC S9 unassigned family S9 unassigned peptidases MER0195361 BDP_2129
SC S9 unassigned family S9 unassigned peptidases MER0195362 BDP_2232
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025457 HMPREF0168_0209
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0195295 pldB BDP_0049
SC S33 unassigned family S33 unassigned peptidases MER0195322 pap BDP_0820
SC S33 unassigned family S33 unassigned peptidases MER0195338 BDP_1361
SC S33 unassigned family S33 unassigned peptidases MER0195355 BDP_1811
SE S12 unassigned family S12 unassigned peptidases MER0195313 BDP_0556
SE S13 S13.004 penillin-binding protein 4 MER0142786 dacB HMPREF0168_1389
SF S24 S24.001 repressor LexA MER0137440 lexA HMPREF0168_0353
SF S26 S26.025 signal peptidase sipX MER0195307 BDP_0337
SH S78 unassigned family S78 unassigned peptidases MER0195315 BDP_0589
SH S78 unassigned family S78 unassigned peptidases MER0195317 BDP_0619
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0195346 lon BDP_1622
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0195311 radA BDP_0475
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0195321 comM HMPREF9003_2218
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0079720 clp1 BDP_0798
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0079712 clp2/clpP2/clpP_1 BDP_0799
ST S54 S54.A08 At1g25290 (Arabidopsis thaliana) MER0195292 BDP_0032
U- U32 unassigned family U32 unassigned peptidases MER0123777 BDP_0375
U- U32 unassigned family U32 unassigned peptidases MER0123778 BDP_0375
U- U72 U72.001 Dop isopeptidase MER0402554 pafA2
U- U72 unassigned family U72 unassigned peptidases MER0402851 pafA

GENOME ANALYSIS: Comparison with 41 completely sequenced genomes from genus Bifidobacterium
Family Comment
C44 lineage specific expansion (6 homologues)
C56 significant presence (2 homologues)
M38 significant presence (4 homologues)
M78 significant presence (1 homologues)
S8 significant presence (2 homologues)
S12 significant presence (1 homologues)
S15 significant presence (1 homologues)
S33 significant presence (4 homologues)

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