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Halorhodospira halophila

Taxonomy
Taxonomy database identifier: 1053
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Chromatiales
Family Ectothiorhodospiraceae
Genus Halorhodospira
Species halophila
Peptidase View peptidase sequences from Halorhodospira halophila
Count of known and putative peptidases: 72, non-peptidase homologues 26
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0062886 lspA Hhal_1835
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0077460 Hhal_2022
CA C39 unassigned family C39 unassigned peptidases MER0077407 Hhal_0738
CL C82 unassigned subfamily C82A unassigned peptidases MER0740891 Hhal_1262
CL C82 unassigned subfamily C82A unassigned peptidases MER0463045 Hhal_0114
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0077396 Hhal_0120
MA M1 unassigned family M1 unassigned peptidases MER0077432 Hhal_1441
MA M3 M03.004 oligopeptidase A MER0077475 Hhal_2397
MA M41 M41.001 FtsH peptidase MER0077451 ftsH Hhal_1770
MA M48 M48.002 HtpX peptidase MER0077457 htpX Hhal_1981
MA M48 unassigned subfamily M48C unassigned peptidases MER0077409 Hhal_0821
MA M48 unassigned subfamily M48C unassigned peptidases MER0077468 Hhal_2202
MA M48 unassigned subfamily M48C unassigned peptidases MER0062887 Hhal_1887
MA M90 unassigned family M90 unassigned peptidases MER0228819 Hhal_0013
ME M16 M16.019 YMXG peptidase MER0077470 Hhal_2306
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0077471 Hhal_2307
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0077472 Hhal_2307
MF M17 M17.003 PepA aminopeptidase MER0077404 pepA Hhal_0681
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0077434 Hhal_1467
MG M24 M24.004 aminopeptidase P (bacteria) MER0077424 Hhal_1185
MG M24 unassigned subfamily M24A unassigned peptidases MER1241458
MH M20 unassigned subfamily M20A unassigned peptidases MER0077435 dapE Hhal_1471
MH M20 unassigned subfamily M20A unassigned peptidases MER0077436 Hhal_1499
MH M20 unassigned subfamily M20A unassigned peptidases MER0077462 Hhal_2045
MH M20 unassigned family M20 unassigned peptidases MER0077411 Hhal_0908
MH M42 unassigned family M42 unassigned peptidases MER0077412 Hhal_0925
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0077406 pyrC Hhal_0730
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0077401 mtaD Hhal_0574
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0077413 Hhal_0942
MM M50 unassigned subfamily M50B unassigned peptidases MER0077433 Hhal_1459
MO M23 M23.009 Mername-AA292 peptidase MER0077410 Hhal_0877
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0077448 Hhal_1684
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0077427 Hhal_1211
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0077431 Hhal_1428
MO M23 unassigned subfamily M23B unassigned peptidases MER0077458 Hhal_1995
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0077466 Hhal_2134
MU M103 M103.UNW family M103 non-peptidase homologues MER0077465 Hhal_2133
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405542 Hhal_0481
PA S1 S01.477 AlgW peptidase MER0077464 Hhal_2110
PA S1 unassigned subfamily S1C unassigned peptidases MER0077393 Hhal_0037
PA S1 unassigned subfamily S1C unassigned peptidases MER0077405 Hhal_0718
PA S1 unassigned subfamily S1C unassigned peptidases MER0077438 Hhal_1502
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0077454 Hhal_1798
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0077421 Hhal_1056
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0077443 Hhal_1617
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0077477 Hhal_2426
PB C44 unassigned family C44 unassigned peptidases MER0077439 Hhal_1512
PB T1 T01.006 HslV component of HslUV peptidase MER0062888 hslV Hhal_1203
PB T1 unassigned family T1 unassigned peptidases MER0081258 Hhal_0305
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0077463 Hhal_2081
PC C26 C26.957 GMP synthase MER0077447 guaA Hhal_1681
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445522 hisH Hhal_1093
PC C26 unassigned family C26 unassigned peptidases MER0077408 Hhal_0772
PC C26 unassigned family C26 unassigned peptidases MER0077430 Hhal_1359
PC C26 unassigned family C26 unassigned peptidases MER0441585 carA Hhal_1776
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0077467 Hhal_2196
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0077426 Hhal_1208
PD N10 unassigned family N10 unassigned peptide lyases MER0223498
PE T5 T05.001 ornithine acetyltransferase precursor MER0077461 argJ Hhal_2026
SB S8 unassigned subfamily S8A unassigned peptidases MER0077474 Hhal_2368
SC S9 S09.010 oligopeptidase B MER0062884 Hhal_1376
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0077440 Hhal_1570
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0077441 Hhal_1571
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0077445 Hhal_1627
SC S9 unassigned subfamily S9C unassigned peptidases MER0077429 Hhal_1322
SC S9 unassigned subfamily S9C unassigned peptidases MER0077455 Hhal_1826
SC S9 unassigned family S9 unassigned peptidases MER0077400 Hhal_0403
SC S9 unassigned family S9 unassigned peptidases MER0209162 Hhal_2278
SC S15 unassigned family S15 unassigned peptidases MER0077437 Hhal_1500
SC S15 unassigned family S15 unassigned peptidases MER0077442 Hhal_1596
SC S33 S33.A46 YheT protein (Escherichia coli) MER0077456 Hhal_1905
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211492 Hhal_2204
SC S33 unassigned family S33 unassigned peptidases MER0077395 Hhal_0119
SC S33 unassigned family S33 unassigned peptidases MER0077414 metX Hhal_0949
SC S33 unassigned family S33 unassigned peptidases MER0077416 Hhal_0961
SC S33 unassigned family S33 unassigned peptidases MER0077418 Hhal_1030
SC S33 unassigned family S33 unassigned peptidases MER0077422 Hhal_1128
SC S33 unassigned family S33 unassigned peptidases MER0077423 Hhal_1136
SC S33 unassigned family S33 unassigned peptidases MER0077444 Hhal_1620
SC S33 unassigned family S33 unassigned peptidases MER0077446 Hhal_1664
SE S11 unassigned family S11 unassigned peptidases MER0077417 Hhal_1012
SF S24 S24.001 repressor LexA MER0077450 lexA Hhal_1741
SF S24 S24.003 UmuD protein MER0077428 Hhal_1278
SF S26 S26.001 signal peptidase I MER0062882 Hhal_0035
SJ S16 S16.001 Lon-A peptidase MER0060868 Hhal_0601
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0077403 Hhal_0651
SJ S16 unassigned family S16 unassigned peptidases MER0062885 Hhal_1717
SK S14 S14.001 peptidase Clp (type 1) MER0077402 clpP Hhal_0603
SK S41 S41.001 C-terminal processing peptidase-1 MER0061849 Hhal_0121
SK S41 S41.004 C-terminal processing peptidase-3 MER0060869 Hhal_1210
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0077397 Hhal_0147
SK S41 unassigned subfamily S41B unassigned peptidases MER0077398 Hhal_0147
SK S49 unassigned subfamily S49B unassigned peptidases MER0077394 Hhal_0102
SK S49 unassigned subfamily S49B unassigned peptidases MER0077453 Hhal_1783
SK S49 unassigned subfamily S49B unassigned peptidases MER0062883 Hhal_1240
ST S54 S54.025 At5g25752 rhomboid peptidase MER0077459 Hhal_2019
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0077419 Hhal_1033
U- U32 unassigned family U32 unassigned peptidases MER0077420 Hhal_1034

GENOME ANALYSIS: Comparison with 12 completely sequenced genomes from family Ectothiorhodospiraceae
Family Comment
M23 lineage specific expansion (5 homologues)
M42 significant presence (1 homologues)
S9 lineage specific expansion (8 homologues)
S33 lineage specific expansion (10 homologues)
S41 lineage specific expansion (4 homologues)
U32 significant presence (2 homologues)

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Page created 8-September-2023

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