Roseobacter denitrificans

Taxonomy
Taxonomy database identifier: 2434
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Species denitrificans
Family Rhodobacteraceae
Genus Roseobacter
Peptidase View peptidase sequences from Roseobacter denitrificans
Count of known and putative peptidases: 69, non-peptidase homologues 26
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.002 RC1339 g.p. (Rickettsia conorii) MER0241749 RD1_3116
AC A8 unassigned family A8 unassigned peptidases MER0080441 lspA RD1_0656
CA C93 unassigned family C93 unassigned peptidases MER0392094 RD1_2215
CL C82 C82.003 ykuD transpeptidase MER0463413 RD1_0492
CL C82 C82.003 ykuD transpeptidase MER0463414 RD1_1118
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244159 RD1_0404
CL C82 unassigned subfamily C82A unassigned peptidases MER0463412 RD1_0402
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0094214 RD1_0315
CO C40 unassigned family C40 unassigned peptidases MER0177746 RD1_3017
G- G5 unassigned family G5 unassigned peptidases MER0080434 RD1_0329
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0080469 pepN RD1_3327
MA M1 unassigned family M1 unassigned peptidases MER0067676 pepN RD1_4194
MA M3 unassigned subfamily M3A unassigned peptidases MER0080450 dcp RD1_1203
MA M3 unassigned subfamily M3B unassigned peptidases MER0093408 pepF RD1_1815
MA M10 unassigned subfamily M10B unassigned peptidases MER0067674 RD1_4125
MA M12 unassigned subfamily M12A unassigned peptidases MER0091050 nas RD1_1303
MA M32 unassigned family M32 unassigned peptidases MER0080460 cxp RD1_2727
MA M41 unassigned family M41 unassigned peptidases MER0105454 ftsH RD1_2101
MA M48 unassigned subfamily M48B unassigned peptidases MER0120259 htpX RD1_0775
MA M48 unassigned subfamily M48C unassigned peptidases MER0080454 RD1_1656
MA M48 unassigned subfamily M48C unassigned peptidases MER0080461 RD1_2797
MA M48 unassigned family M48 unassigned peptidases MER0080462 RD1_2823
MA M56 unassigned family M56 unassigned peptidases MER0067673 RD1_4114
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0177602 RD1_2617
MD M74 unassigned family M74 unassigned peptidases MER0080437 mepA RD1_0362
ME M16 M16.019 YMXG peptidase MER0080442 pqqE RD1_0658
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0080443 RD1_0659
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0080444 RD1_0659
ME M16 unassigned subfamily M16B unassigned peptidases MER0080456 mpp RD1_2142
MF M17 unassigned family M17 unassigned peptidases MER0080468 pepA RD1_3118
MF M17 unassigned family M17 unassigned peptidases MER0080433 pepA RD1_0314
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0067654 pepQ RD1_3472
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0168825 cln RD1_0929
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0067655 RD1_3474
MG M24 unassigned subfamily M24A unassigned peptidases MER0080448 map RD1_0949
MG M24 unassigned subfamily M24B unassigned peptidases MER0481870 RD1_3341
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0844120 RD1_3101
MH M20 unassigned subfamily M20A unassigned peptidases MER0067675 argE RD1_4143
MH M20 unassigned family M20D unassigned peptidases MER0092139 RD1_3310
MH M20 unassigned family M20D unassigned peptidases MER0092140 RD1_3132
MH M20 unassigned subfamily M20F unassigned peptidases MER0080463 RD1_2828
MH M20 unassigned family M20 unassigned peptidases MER0854865 argE
MH M20 unassigned family M20 unassigned peptidases MER0067663 RD1_3695
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0341608 RD1_2067
MJ M38 M38.982 urease MER0067665 ureC RD1_3800
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864556 RD1_A0093
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874664 hydA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067651 pyr RD1_3429
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067662 hutI RD1_3677
MM M50 unassigned subfamily M50B unassigned peptidases MER0080459 ecfE RD1_2591
MO M23 unassigned subfamily M23B unassigned peptidases MER0080466 RD1_3002
MO M23 unassigned family M23 unassigned peptidases MER0067660 RD1_3675
MP M67 unassigned family M67 unassigned peptidases MER0906021 RD1_A0040
MS M75 M75.001 imelysin MER0109116 RD1_0911
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0100638 pmbA RD1_0290
NB N6 unassigned family N6 unassigned peptide lyases MER0405943 flhB RD1_0151
PA S1 S01.260 B1598 peptidase MER0080440 RD1_0628
PA S1 S01.260 B1598 peptidase MER0080447 RD1_0817
PA S1 S01.260 B1598 peptidase MER0080458 RD1_2542
PA S1 unassigned subfamily S1C unassigned peptidases MER0080446 degP RD1_0774
PA S1 unassigned subfamily S1C unassigned peptidases MER0080449 RD1_1018
PA S1 unassigned subfamily S1C unassigned peptidases MER0080455 degP RD1_1923
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0119613 RD1_3247
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458663 gltB RD1_0060
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455830 glmS RD1_3305
PB C44 unassigned family C44 unassigned peptidases MER0067677 RD1_4253
PB S45 S45.003 cephalosporin C acylase precursor MER0109249 acy RD1_2752
PB T1 T01.006 HslV component of HslUV peptidase MER0080438 hslV RD1_0450
PB T1 unassigned family T1 unassigned peptidases MER0080471 RD1_4009
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0067652 ggt RD1_3436
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0101179 ggtA RD1_0028
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0101180 ggtA RD1_2179
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435937 trpG RD1_3209
PC C26 unassigned family C26 unassigned peptidases MER0449254 RD1_1893
PC C26 unassigned family C26 unassigned peptidases MER0442525 carA RD1_1963
PC C26 unassigned family C26 unassigned peptidases MER0450538 RD1_3323
PC C26 unassigned family C26 unassigned peptidases MER0067659 hisH RD1_3557
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0177101 araC RD1_0008
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163900 RD1_1700
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0164086 RD1_2634
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0067664 RD1_3782
PC C56 unassigned family C56 unassigned peptidases MER0080453 RD1_1397
PE T5 T05.001 ornithine acetyltransferase precursor MER0118144 argJ RD1_0384
SB S8 unassigned subfamily S8A unassigned peptidases MER0067671 apr RD1_4002
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001168 RD1_1980
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0067666 RD1_3870
SC S9 unassigned subfamily S9B unassigned peptidases MER0999271 RD1_0888
SC S9 unassigned subfamily S9B unassigned peptidases MER1000829 fghA
SC S9 unassigned family S9 unassigned peptidases MER0477923 RD1_2701
SC S9 unassigned family S9 unassigned peptidases MER0210421 RD1_3095
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1026858 RD1_2701
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1024921 RD1_1980
SC S33 S33.001 prolyl aminopeptidase MER0100449 pip RD1_0391
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209978 dehH1 RD1_2829
SC S33 unassigned family S33 unassigned peptidases MER1339042
SC S33 unassigned family S33 unassigned peptidases MER0208670 RD1_1842
SC S33 unassigned family S33 unassigned peptidases MER0208787 RD1_1886
SC S33 unassigned family S33 unassigned peptidases MER0067656 RD1_3489
SC S33 unassigned family S33 unassigned peptidases MER0067658 RD1_3526
SC S33 unassigned family S33 unassigned peptidases MER0067668 RD1_3930
SC S33 unassigned family S33 unassigned peptidases MER0067669 pcaD RD1_3932
SC S33 unassigned family S33 unassigned peptidases MER0067670 estC RD1_3934
SE S11 unassigned family S11 unassigned peptidases MER0080451 dacA RD1_1278
SE S11 unassigned family S11 unassigned peptidases MER0067653 dacC RD1_3465
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0067667 nylB RD1_3903
SE S13 unassigned family S13 unassigned peptidases MER0100817 dacB RD1_1244
SF S24 S24.001 repressor LexA MER0117601 lexA RD1_3216
SF S26 S26.001 signal peptidase I MER0080452 lepB RD1_1365
SF S26 unassigned subfamily S26A unassigned peptidases MER1336726
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0080467 RD1_3030
SJ S16 S16.001 Lon-A peptidase MER0080465 lon RD1_2950
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474423 radA RD1_3245
SK S14 S14.001 peptidase Clp (type 1) MER0080464 clpP RD1_2858
SK S41 S41.004 C-terminal processing peptidase-3 MER0080435 ctpA RD1_0333
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0067672 RD1_4091
ST S54 non-peptidase homologue family S54 non-peptidase homologues MER1082420 RD1_1186
ST S54 unassigned family S54 unassigned peptidases MER1079053 RD1_B0028
ST S54 unassigned family S54 unassigned peptidases MER1083609 RD1_2508

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
C93 significant presence (1 homologues)
M12 significant presence (1 homologues)
M67 significant presence (1 homologues)