Shewanella sp. MR-4

Taxonomy
Taxonomy database identifier: 60480
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Alteromonadales
Family Alteromonadaceae
Genus Shewanella
Species sp. MR-4
Peptidase View peptidase sequences from Shewanella sp. MR-4
Count of known and putative peptidases: 141, non-peptidase homologues 47
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0073047 lspA Shewmr4_2956
AD A24 unassigned subfamily A24A unassigned peptidases MER0072962 Shewmr4_0418
AE A31 unassigned family A31 unassigned peptidases MER0073001 Shewmr4_1819
CA C51 unassigned family C51 unassigned peptidases MER0241480 Shewmr4_0290
CD C14 unassigned subfamily C14B unassigned peptidases MER0073058 Shewmr4_3209
CL C60 unassigned subfamily C60A unassigned peptidases MER0073016 Shewmr4_2199
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244139 Shewmr4_2210
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0461903 Shewmr4_3091
CO C40 C40.004 spr peptidase MER0074366 Shewmr4_0061
G- G5 unassigned family G5 unassigned peptidases MER0073062 Shewmr4_3298
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0072998 Shewmr4_1674
MA M1 M01.031 cold-active aminopeptidase (Colwellia psychrerythraea)-type peptidase MER0073018 Shewmr4_2267
MA M1 unassigned family M1 unassigned peptidases MER0073035 Shewmr4_2706
MA M1 unassigned family M1 unassigned peptidases MER0073051 Shewmr4_3040
MA M2 unassigned family M2 unassigned peptidases MER0073011 Shewmr4_2051
MA M3 M03.004 oligopeptidase A MER0073079 Shewmr4_3842
MA M3 unassigned subfamily M3A unassigned peptidases MER0072988 Shewmr4_1355
MA M3 unassigned subfamily M3A unassigned peptidases MER0072993 Shewmr4_1525
MA M3 unassigned subfamily M3A unassigned peptidases MER0073020 Shewmr4_2302
MA M4 M04.016 PA peptidase (Aeromonas-type) MER0073030 Shewmr4_2515
MA M6 unassigned family M6 unassigned peptidases MER0072958 Shewmr4_0125
MA M11 unassigned family M11 unassigned peptidases MER0072966 Shewmr4_0529
MA M13 unassigned family M13 unassigned peptidases MER0072963 Shewmr4_0433
MA M13 unassigned family M13 unassigned peptidases MER0072964 Shewmr4_0499
MA M13 unassigned family M13 unassigned peptidases MER0073057 Shewmr4_3179
MA M32 unassigned family M32 unassigned peptidases MER0073040 Shewmr4_2819
MA M36 unassigned family M36 unassigned peptidases MER0073055 Shewmr4_3141
MA M41 M41.001 FtsH peptidase MER0072981 ftsH Shewmr4_1019
MA M48 M48.002 HtpX peptidase MER0073023 htpX Shewmr4_2351
MA M48 M48.023 BepA (Escherichia coli) MER0073022 Shewmr4_2347
MA M48 unassigned subfamily M48A unassigned peptidases MER0072957 Shewmr4_0111
MA M48 unassigned subfamily M48C unassigned peptidases MER0072979 Shewmr4_0962
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0073021 Shewmr4_2315
MA M61 unassigned family M61 unassigned peptidases MER0073036 Shewmr4_2712
MA M88 unassigned family M88 non-peptidase homologues MER0185637 Shewmr4_0443
MA M90 unassigned family M90 unassigned peptidases MER0229113 Shewmr4_1210
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0074398 Shewmr4_2121
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0074414 Shewmr4_3092
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0072960 Shewmr4_0145
MC M14 unassigned subfamily M14B unassigned peptidases MER0074403 Shewmr4_2282
MC M14 unassigned subfamily M14D unassigned peptidases MER0073006 Shewmr4_1905
MD M15 unassigned subfamily M15B unassigned peptidases MER0073004 Shewmr4_1856
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0073065 Shewmr4_3417
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0073074 Shewmr4_3741
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0073050 Shewmr4_2981
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0073073 Shewmr4_3741
ME M16 unassigned subfamily M16A unassigned peptidases MER0072990 Shewmr4_1412
ME M16 unassigned subfamily M16B unassigned peptidases MER0073049 Shewmr4_2981
ME M16 unassigned subfamily M16B unassigned peptidases MER0073052 Shewmr4_3093
ME M16 unassigned subfamily M16B unassigned peptidases MER0073064 Shewmr4_3417
ME M16 unassigned subfamily M16B unassigned peptidases MER0073075 Shewmr4_3742
MF M17 M17.003 PepA aminopeptidase MER0073041 pepA2 Shewmr4_2827
MF M17 M17.004 PepB aminopeptidase MER0072970 Shewmr4_0732
MF M17 unassigned family M17 unassigned peptidases MER0072972 pepA1 Shewmr4_0802
MF M17 unassigned family M17 unassigned peptidases MER0072978 Shewmr4_0949
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0073034 Shewmr4_2642
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0072955 pepQ Shewmr4_0019
MG M24 unassigned subfamily M24A unassigned peptidases MER0072975 Shewmr4_0884
MG M24 unassigned subfamily M24B unassigned peptidases MER0073038 Shewmr4_2807
MH M20 M20.007 Xaa-His dipeptidase MER0072977 Shewmr4_0948
MH M20 unassigned subfamily M20A unassigned peptidases MER0073005 dapE Shewmr4_1857
MH M20 unassigned family M20D unassigned peptidases MER0073076 Shewmr4_3743
MH M20 unassigned family M20 unassigned peptidases MER0073019 Shewmr4_2301
MH M28 unassigned subfamily M28C unassigned peptidases MER0659117
MH M28 unassigned subfamily M28D unassigned peptidases MER0073048 Shewmr4_2962
MH M28 unassigned subfamily M28E unassigned peptidases MER0073026 Shewmr4_2383
MH M28 unassigned subfamily M28F unassigned peptidases MER0073066 Shewmr4_3423
MH M28 unassigned family M28 unassigned peptidases MER0073015 Shewmr4_2197
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0073053 Shewmr4_3133
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0074378 pyrC Shewmr4_0860
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074364 Shewmr4_0011
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074383 Shewmr4_1349
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074384 Shewmr4_1350
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074385 Shewmr4_1350
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074408 Shewmr4_2531
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0074412 Shewmr4_2933
MJ M38 unassigned family M38 unassigned peptidases MER0074369 hutI Shewmr4_0097
MM M50 unassigned subfamily M50B unassigned peptidases MER0073033 Shewmr4_2634
MM M50 unassigned subfamily M50B unassigned peptidases MER0073061 Shewmr4_3275
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0073027 Shewmr4_2448
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0073043 Shewmr4_2881
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0072986 Shewmr4_1122
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0073017 Shewmr4_2214
MO M23 unassigned subfamily M23B unassigned peptidases MER0072961 Shewmr4_0288
MO M23 unassigned subfamily M23B unassigned peptidases MER0073070 Shewmr4_3563
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0073068 Shewmr4_3465
MU M103 M103.UNW family M103 non-peptidase homologues MER0073067 Shewmr4_3455
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405604 flhB Shewmr4_1295
PA S1 S01.275 DegS peptidase MER0073060 Shewmr4_3272
PA S1 unassigned subfamily S1A unassigned peptidases MER0074390 Shewmr4_1788
PA S1 unassigned subfamily S1C unassigned peptidases MER0073059 Shewmr4_3271
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0074413 Shewmr4_3025
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0074416 Shewmr4_3249
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0074386 Shewmr4_1430
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0074410 Shewmr4_2872
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0074407 Shewmr4_2384
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0074428 Shewmr4_3920
PB C44 unassigned family C44 unassigned peptidases MER0074399 Shewmr4_2145
PB S45 S45.004 acyl-homoserine lactone acylase MER0072971 Shewmr4_0760
PB T1 T01.006 HslV component of HslUV peptidase MER0073069 hslV Shewmr4_3521
PB T2 unassigned family T2 unassigned peptidases MER0073003 Shewmr4_1837
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0074404 Shewmr4_2297
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0074421 Shewmr4_3344
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0074371 Shewmr4_0607
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0074388 Shewmr4_1461
PC C26 C26.961 PuuD protein MER0073046 Shewmr4_2920
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444648 hisH Shewmr4_1796
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0074380 guaA Shewmr4_1235
PC C26 unassigned family C26 unassigned peptidases MER0441577 carA Shewmr4_0965
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0074381 purL Shewmr4_1238
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0073039 Shewmr4_2815
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0074367 Shewmr4_0070
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0074405 Shewmr4_2331
PC S51 S51.001 dipeptidase E MER0073024 pepE Shewmr4_2352
SB S8 S08.125 AspA (Aeromonas sobria)-type peptidase MER0072996 Shewmr4_1610
SB S8 S08.130 MCP-01 peptidase MER0072969 Shewmr4_0723
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1285875
SB S8 unassigned subfamily S8A unassigned peptidases MER0072965 Shewmr4_0501
SB S8 unassigned subfamily S8A unassigned peptidases MER0072973 Shewmr4_0822
SB S8 unassigned subfamily S8A unassigned peptidases MER0072989 Shewmr4_1390
SB S8 unassigned subfamily S8A unassigned peptidases MER0072995 Shewmr4_1596
SB S8 unassigned subfamily S8A unassigned peptidases MER0073031 Shewmr4_2570
SB S8 unassigned subfamily S8A unassigned peptidases MER0073063 Shewmr4_3374
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0072968 Shewmr4_0650
SC S9 S09.010 oligopeptidase B MER0072959 Shewmr4_0136
SC S9 S09.012 dipeptidyl-peptidase 5 MER0073013 Shewmr4_2123
SC S9 S09.021 glutamyl endopeptidase C MER0073044 Shewmr4_2884
SC S9 S09.074 tyrosyl aminopeptidase (Raphanus-type) MER0073032 Shewmr4_2589
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0074389 Shewmr4_1787
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0213562 Shewmr4_3232
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0073071 Shewmr4_3601
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0073078 Shewmr4_3803
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0074372 Shewmr4_0610
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0074375 Shewmr4_0806
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0074377 Shewmr4_0833
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0074417 Shewmr4_3281
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0074419 Shewmr4_3289
SC S9 unassigned subfamily S9A unassigned peptidases MER0073012 Shewmr4_2104
SC S9 unassigned subfamily S9A unassigned peptidases MER0073025 Shewmr4_2373
SC S9 unassigned subfamily S9B unassigned peptidases MER0072967 Shewmr4_0608
SC S9 unassigned subfamily S9C unassigned peptidases MER0073072 Shewmr4_3740
SC S9 unassigned family S9 unassigned peptidases MER0073037 Shewmr4_2719
SC S9 unassigned family S9 unassigned peptidases MER0208748 Shewmr4_2723
SC S9 unassigned family S9 unassigned peptidases MER0074418 Shewmr4_3286
SC S9 unassigned family S9 unassigned peptidases MER0074420 Shewmr4_3316
SC S10 unassigned family S10 unassigned peptidases MER0072976 Shewmr4_0889
SC S33 S33.001 prolyl aminopeptidase MER0074370 Shewmr4_0317
SC S33 S33.010 SCO7095-type peptidase MER0074427 Shewmr4_3914
SC S33 S33.A46 YheT protein (Escherichia coli) MER0074373 Shewmr4_0736
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0074393 Shewmr4_1872
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0074396 Shewmr4_2033
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0074409 Shewmr4_2547
SC S33 unassigned family S33 unassigned peptidases MER0074368 Shewmr4_0074
SC S33 unassigned family S33 unassigned peptidases MER0209721 Shewmr4_1043
SC S33 unassigned family S33 unassigned peptidases MER0074387 Shewmr4_1434
SC S33 unassigned family S33 unassigned peptidases MER0074392 Shewmr4_1855
SC S33 unassigned family S33 unassigned peptidases MER0074400 Shewmr4_2178
SC S33 unassigned family S33 unassigned peptidases MER0074402 Shewmr4_2281
SC S33 unassigned family S33 unassigned peptidases MER0074424 Shewmr4_3768
SC S33 unassigned family S33 unassigned peptidases MER0074425 bioH Shewmr4_3806
SE S11 S11.002 murein-DD-endopeptidase MER0072974 Shewmr4_0828
SE S11 unassigned family S11 unassigned peptidases MER0072980 Shewmr4_0987
SE S12 S12.006 class C beta-lactamase MER0074394 Shewmr4_1937
SE S12 unassigned family S12 unassigned peptidases MER0074374 Shewmr4_0756
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0073009 Shewmr4_1932
SF S24 S24.001 repressor LexA MER0073077 lexA Shewmr4_3789
SF S24 S24.003 UmuD protein MER0072999 Shewmr4_1782
SF S24 unassigned family S24 unassigned peptidases MER0073000 Shewmr4_1782
SF S26 S26.001 signal peptidase I MER0073042 Shewmr4_2849
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0072992 Shewmr4_1481
SJ S16 S16.001 Lon-A peptidase MER0073028 Shewmr4_2493
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0072982 Shewmr4_1045
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0072994 Shewmr4_1546
SJ S16 unassigned family S16 unassigned peptidases MER0072987 Shewmr4_1159
SK S14 S14.001 peptidase Clp (type 1) MER0073029 clpP Shewmr4_2495
SK S41 S41.001 C-terminal processing peptidase-1 MER0072997 Shewmr4_1673
SK S41 S41.004 C-terminal processing peptidase-3 MER0072956 Shewmr4_0043
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0076213 Shewmr4_1143
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0072991 Shewmr4_1470
SK S49 unassigned subfamily S49B unassigned peptidases MER0073007 Shewmr4_1909
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0074426 Shewmr4_3903
ST S54 unassigned family S54 unassigned peptidases MER0074376 Shewmr4_0829
ST S54 unassigned family S54 unassigned peptidases MER0074397 Shewmr4_2060
U- U32 U32.002 collagenase (Helicobacter-type) MER0072985 Shewmr4_1064
U- U32 U32.003 collagenase (Salmonella-type) MER0073054 Shewmr4_3138
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0072983 Shewmr4_1060
U- U32 unassigned family U32 unassigned peptidases MER0072984 Shewmr4_1061

GENOME ANALYSIS: Comparison with 24 completely sequenced genomes from genus Shewanella
Family Comment
C14 significant presence (1 homologues)
G5 significant presence (1 homologues)