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Geobacter sp. FRC-32

Taxonomy
Taxonomy database identifier: 316067
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfuromonadales
Family Geobacteraceae
Genus Geobacter
Species sp. FRC-32
Peptidase View peptidase sequences from Geobacter sp. FRC-32
Count of known and putative peptidases: 89, non-peptidase homologues 40
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0085650 lspA Geob_0391
AD A24 A24.019 ComC peptidase MER0085668 Geob_3081
AE A31 unassigned family A31 unassigned peptidases MER0085636 Geob_1380
CA C39 unassigned family C39 unassigned peptidases MER0085641 Geob_1788
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0154826 Geob_2819
CL C82 unassigned subfamily C82A unassigned peptidases MER0154755 Geob_0131
CL C82 unassigned subfamily C82A unassigned peptidases MER0154756 Geob_0133
CL C82 unassigned subfamily C82A unassigned peptidases MER0154775 Geob_1196
CL C82 unassigned subfamily C82A unassigned peptidases MER0154817 Geob_2367
CL C82 unassigned subfamily C82A unassigned peptidases MER0154834 Geob_3139
CO C40 C40.004 spr peptidase MER0094208 Geob_2749
CO C40 C40.006 PgpA peptidase MER0094209 Geob_3092
CO C40 unassigned family C40 unassigned peptidases MER0154816 Geob_2310
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0154855 Geob_3669
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0154856 Geob_3674
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0085664 Geob_3109
MA M1 unassigned family M1 unassigned peptidases MER0085666 Geob_3560
MA M3 unassigned subfamily M3B unassigned peptidases MER0085640 Geob_3030
MA M3 unassigned family M3 unassigned peptidases MER0085652 Geob_1727
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0105583 ftsH3 Geob_3423
MA M41 unassigned family M41 unassigned peptidases MER0105584 ftsH1 Geob_0433
MA M41 unassigned family M41 unassigned peptidases MER0105582 ftsH2 Geob_1887
MA M48 M48.019 GSU1437 putative peptidase MER0085639 Geob_3031
MA M48 unassigned subfamily M48A unassigned peptidases MER0085674 Geob_0885
MA M48 unassigned subfamily M48B unassigned peptidases MER0154827 htpX2 Geob_2846
MA M48 unassigned subfamily M48B unassigned peptidases MER0154792 htpX1 Geob_1777
MA M48 unassigned subfamily M48C unassigned peptidases MER0085685 Geob_0574
MA M48 unassigned family M48 unassigned peptidases MER0085673 Geob_0884
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0085677 Geob_2080
ME M16 unassigned subfamily M16B unassigned peptidases MER0085676 Geob_2081
ME M16 unassigned subfamily M16B unassigned peptidases MER0124324 Geob_2698
ME M16 unassigned subfamily M16B unassigned peptidases MER0085683 Geob_0028
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0154831 Geob_2904
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0085665 Geob_3550
MG M24 unassigned subfamily M24A unassigned peptidases MER0085655 Geob_3603
MG M24 unassigned subfamily M24B unassigned peptidases MER0085667 Geob_3058
MH M20 M20.018 BC4143 protein MER0085679 Geob_2000
MH M20 unassigned subfamily M20A unassigned peptidases MER0085681 Geob_3773
MH M20 unassigned family M20D unassigned peptidases MER0085661 Geob_0411
MH M42 unassigned family M42 unassigned peptidases MER0085670 Geob_2180
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154828 Geob_2875
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154839 pyrC Geob_3265
MM M50 unassigned subfamily M50A unassigned peptidases MER0085657 Geob_1515
MM M50 unassigned subfamily M50B unassigned peptidases MER0085642 Geob_3017
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0154819 Geob_2653
MO M23 unassigned subfamily M23B unassigned peptidases MER0085662 Geob_1059
MO M23 unassigned subfamily M23B unassigned peptidases MER0085644 Geob_1069
MO M23 unassigned subfamily M23B unassigned peptidases MER0085669 Geob_1321
MO M23 unassigned subfamily M23B unassigned peptidases MER0085689 Geob_2559
MO M23 unassigned subfamily M23B unassigned peptidases MER0085658 Geob_2996
MO M23 unassigned subfamily M23B unassigned peptidases MER0085672 Geob_3172
MP M67 unassigned subfamily M67B unassigned peptidases MER0154767 Geob_0799
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0154788 Geob_1606
MQ M29 unassigned family M29 unassigned peptidases MER0079059 Geob_2700
MU M103 M103.UNW family M103 non-peptidase homologues MER0085671 Geob_3458
MU M103 M103.UPW family M103 unassigned peptidases MER0085648 Geob_1545
PA S1 unassigned subfamily S1C unassigned peptidases MER0085638 Geob_0407
PA S1 unassigned subfamily S1C unassigned peptidases MER0085647 Geob_1025
PA S1 unassigned subfamily S1C unassigned peptidases MER0085654 Geob_1195
PA S1 unassigned family S1 unassigned peptidases MER0154825 Geob_2711
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0122194 Geob_2890
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0154780 Geob_1318
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0154857 Geob_3682
PB C44 unassigned family C44 unassigned peptidases MER0154832 Geob_2948
PB C44 unassigned family C44 unassigned peptidases MER0154841 Geob_3276
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0154850 Geob_3439
PC C26 C26.957 GMP synthase MER0154808 guaA Geob_2182
PC C26 C26.964 CTP synthetase MER0154814 pyrG Geob_2273
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0154762 Geob_0691
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0154754 Geob_0038
PC C26 unassigned family C26 unassigned peptidases MER0154795 Geob_1810
PC C26 unassigned family C26 unassigned peptidases MER0154840 Geob_3266
PC C56 C56.001 PfpI peptidase MER0085643 Geob_2352
PC C56 C56.001 PfpI peptidase MER0085646 Geob_2750
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0154766 Geob_0789
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0154806 Geob_2066
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0154830 Geob_2891
PE T5 T05.002 ArgJ protein (archea) MER0100897 argJ Geob_3086
SB S8 unassigned subfamily S8A unassigned peptidases MER0085659 Geob_2986
SB S8 unassigned subfamily S8A unassigned peptidases MER0085682 Geob_0072
SB S8 unassigned subfamily S8A unassigned peptidases MER0085653 Geob_1639
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0154838 Geob_3261
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0154801 Geob_2027
SC S9 unassigned family S9 unassigned peptidases MER0154805 Geob_2048
SC S10 unassigned family S10 unassigned peptidases MER0085651 Geob_0363
SC S33 S33.990 haloalkane dehalogenase MER0118583 Geob_3150
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0154781 Geob_1324
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0154803 Geob_2042
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0154804 Geob_2043
SC S33 unassigned family S33 unassigned peptidases MER0154771 Geob_0938
SC S33 unassigned family S33 unassigned peptidases MER0154776 Geob_1204
SC S33 unassigned family S33 unassigned peptidases MER0154777 Geob_1207
SC S33 unassigned family S33 unassigned peptidases MER0154784 Geob_1386
SC S33 unassigned family S33 unassigned peptidases MER0154785 metX Geob_1391
SC S33 unassigned family S33 unassigned peptidases MER0154802 Geob_2028
SC S33 unassigned family S33 unassigned peptidases MER0154807 Geob_2085
SE S12 S12.950 esterase EstB MER0154833 Geob_3084
SE S12 S12.950 esterase EstB MER0154772 Geob_1068
SE S12 unassigned family S12 unassigned peptidases MER0125853 Geob_2051
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0154787 Geob_1535
SF S26 S26.025 signal peptidase sipX MER0085637 Geob_3287
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0085678 Geob_2078
SJ S16 S16.001 Lon-A peptidase MER0085675 lon Geob_0904
SJ S16 S16.001 Lon-A peptidase MER0085687 lon Geob_2636
SJ S16 S16.001 Lon-A peptidase MER0085645 Geob_1940
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0154859 Geob_3703
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0154763 Geob_0707
SJ S16 unassigned family S16 unassigned peptidases MER0085686 lon Geob_0573
SJ S16 unassigned family S16 unassigned peptidases MER0085663 Geob_1956
SK S14 S14.001 peptidase Clp (type 1) MER0085688 clpP Geob_2634
SK S41 S41.004 C-terminal processing peptidase-3 MER0085680 Geob_1986
SK S41 S41.004 C-terminal processing peptidase-3 MER0154820 Geob_2654
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER0154815 Geob_2293
SK S49 unassigned subfamily S49B unassigned peptidases MER0085660 Geob_2906
SK S49 unassigned subfamily S49B unassigned peptidases MER0154851 Geob_3498
ST S54 S54.004 AarA peptidase MER0154852 Geob_3558
ST S54 unassigned family S54 unassigned peptidases MER0154789 Geob_1665
U- U32 U32.002 collagenase (Helicobacter-type) MER0085649 Geob_1554
U- U32 unassigned family U32 unassigned peptidases MER0085684 Geob_0022

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Geobacter
Family Comment
A31 significant decrease in homologues (1 homologues)
C39 significant presence (1 homologues)
M23 lineage specific expansion (7 homologues)
S24 significant decrease in homologues (1 homologues)
S33 lineage specific expansion (11 homologues)

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Page created 8-September-2023

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