Merops Switch to
Inhibitors

Peptidase

Family Clan SEARCHES BLAST
MEROPS SUBMISSIONS

Other
information

Methylobacterium sp. 4-46

Taxonomy
Taxonomy database identifier: 426117
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Genus Methylobacterium
Family Methylobacteriaceae
Species sp. 4-46
Peptidase View peptidase sequences from Methylobacterium sp. 4-46
Count of known and putative peptidases: 165, non-peptidase homologues 81
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241682 M446_2391
AA A32 unassigned family A32 unassigned peptidases MER0241880 M446_4379
AC A8 unassigned family A8 unassigned peptidases MER0028437 lspA M446_2219
AD A24 unassigned subfamily A24A unassigned peptidases MER0025155 M446_2386
AD A24 unassigned family A24 unassigned peptidases MER0034536 M446_2023
CA C39 C39.005 colicin V processing peptidase MER0061724 M446_0092
CA C39 C39.005 colicin V processing peptidase MER0121029 M446_3755
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0121031 M446_3820
CD C14 non-peptidase homologue family C14 non-peptidase homologues MER0061253 M446_0290
CD C14 non-peptidase homologue family C14 non-peptidase homologues MER0059970 M446_0910
CD C14 non-peptidase homologue family C14 non-peptidase homologues MER0121076 M446_5032
CD C14 unassigned subfamily C14B unassigned peptidases MER0061773 M446_0029
CD C14 unassigned subfamily C14B unassigned peptidases MER0060154 M446_0540
CD C14 unassigned subfamily C14B unassigned peptidases MER0059936 M446_0920
CD C14 unassigned subfamily C14B unassigned peptidases MER0047817 M446_1617
CD C14 unassigned subfamily C14B unassigned peptidases MER0121075 M446_5030
CD C14 unassigned subfamily C14B unassigned peptidases MER0121144 M446_6666
CL C60 unassigned subfamily C60A unassigned peptidases MER0121081 M446_5133
CL C82 C82.003 ykuD transpeptidase MER0061718 M446_0133
CL C82 C82.003 ykuD transpeptidase MER0061193 M446_0387
CL C82 C82.003 ykuD transpeptidase MER0019727 M446_2711
CL C82 C82.003 ykuD transpeptidase MER0017318 M446_2959
CL C82 C82.003 ykuD transpeptidase MER0076662 M446_3650
CL C82 C82.003 ykuD transpeptidase MER0076663 M446_4450
CL C82 C82.003 ykuD transpeptidase MER0121056 M446_4451
CL C82 C82.003 ykuD transpeptidase MER0121115 M446_5998
CL C82 C82.003 ykuD transpeptidase MER0121142 M446_6604
CL C82 unassigned subfamily C82A unassigned peptidases MER0061775 M446_0013
CL C82 unassigned subfamily C82A unassigned peptidases MER0038721 M446_1842
CL C82 unassigned subfamily C82A unassigned peptidases MER0121111 M446_5913
CL C82 unassigned subfamily C82A unassigned peptidases MER0243950 M446_4794
CL C82 unassigned subfamily C82A unassigned peptidases MER0243888 M446_5308
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0034246 M446_2154
CO C40 unassigned family C40 unassigned peptidases MER0121114 M446_5974
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0053151 M446_1092
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0061272 M446_0267
MA M3 unassigned subfamily M3A unassigned peptidases MER0103297 M446_0011
MA M3 unassigned subfamily M3B unassigned peptidases MER0015603 M446_3148
MA M10 unassigned subfamily M10A unassigned peptidases MER0055921 M446_0982
MA M10 unassigned subfamily M10B unassigned peptidases MER0121150 M446_6774
MA M10 unassigned family M10 unassigned peptidases MER0034725 M446_1950
MA M26 unassigned family M26 unassigned peptidases MER1245802
MA M32 unassigned family M32 unassigned peptidases MER0107840 M446_3931
MA M41 M41.001 FtsH peptidase MER0105509 ftsH M446_0283
MA M48 unassigned subfamily M48C unassigned peptidases MER0121087 M446_5285
MD M74 unassigned family M74 unassigned peptidases MER0105187 M446_2176
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0030238 M446_2216
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0121042 M446_4179
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0121043 M446_4179
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0031241 M446_2216
ME M16 unassigned subfamily M16B unassigned peptidases MER0030190 M446_2217
ME M16 unassigned subfamily M16B unassigned peptidases MER0025974 M446_2340
ME M16 unassigned subfamily M16B unassigned peptidases MER0121041 M446_4178
MF M17 unassigned family M17 unassigned peptidases MER0121132 M446_6389
MF M17 unassigned family M17 unassigned peptidases MER0105918 pepA M446_5097
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0121148 M446_6761
MG M24 M24.009 aminopeptidase P1 MER0001874 M446_3250
MG M24 unassigned subfamily M24A unassigned peptidases MER0121020 M446_3510
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0059974 M446_0893
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0016523 M446_3010
MH M20 unassigned subfamily M20A unassigned peptidases MER0121028 M446_3737
MH M20 unassigned subfamily M20A unassigned peptidases MER0121046 dapE M446_4235
MH M20 unassigned subfamily M20A unassigned peptidases MER0121077 M446_5033
MH M20 unassigned subfamily M20A unassigned peptidases MER0059986 M446_0873
MH M20 unassigned subfamily M20B unassigned peptidases MER0105417 M446_3612
MH M20 unassigned family M20D unassigned peptidases MER0014116 M446_3187
MH M20 unassigned family M20D unassigned peptidases MER0121062 M446_4664
MH M20 unassigned subfamily M20F unassigned peptidases MER0022971 M446_2668
MH M20 unassigned family M20 unassigned peptidases MER0039418 M446_1838
MH M20 unassigned family M20 unassigned peptidases MER0016699 M446_2971
MH M20 unassigned family M20 unassigned peptidases MER0121089 M446_5353
MH M20 unassigned family M20 unassigned peptidases MER0121138 M446_6541
MH M42 unassigned family M42 unassigned peptidases MER0109568 M446_2678
MJ M19 unassigned family M19 unassigned peptidases MER0341723 M446_3568
MJ M38 M38.982 urease MER0032901 ureC M446_2211
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0060751 M446_0494
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0060134 M446_0558
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0058123 M446_0933
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0046054 hutI M446_1654
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0046051 M446_1655
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0040403 M446_1753
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0034327 M446_2144
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0028263 ade M446_2226
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0024740 M446_2543
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0022972 M446_2623
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0018597 M446_2908
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121019 M446_3497
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121023 M446_3603
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121024 M446_3608
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121032 M446_3838
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121034 M446_3928
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121050 M446_4347
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121066 M446_4683
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121098 M446_5637
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0121099 M446_5700
MJ M38 unassigned family M38 unassigned peptidases MER0121065 M446_4676
MM M50 unassigned subfamily M50B unassigned peptidases MER0060129 M446_0637
MM M50 unassigned subfamily M50B unassigned peptidases MER0060099 M446_0694
MO M23 M23.009 Mername-AA292 peptidase MER0016521 M446_3043
MO M23 M23.009 Mername-AA292 peptidase MER0121107 M446_5846
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0121044 M446_4222
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0121139 M446_6574
MO M23 unassigned subfamily M23B unassigned peptidases MER0121030 M446_3798
MQ M29 M29.001 aminopeptidase T MER0100576 M446_3109
MQ M29 unassigned family M29 unassigned peptidases MER1255968
MT M81 unassigned family M81 unassigned peptidases MER0223165 M446_0762
MT M81 unassigned family M81 unassigned peptidases MER0223166 M446_0874
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327283
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405649 M446_5150
PA S1 unassigned subfamily S1A unassigned peptidases MER0121051 M446_4439
PA S1 unassigned subfamily S1A unassigned peptidases MER0121059 M446_4609
PA S1 unassigned subfamily S1A unassigned peptidases MER0121052 M446_4440
PA S1 unassigned subfamily S1C unassigned peptidases MER0053470 M446_1086
PA S1 unassigned subfamily S1C unassigned peptidases MER0042482 M446_1718
PA S1 unassigned subfamily S1C unassigned peptidases MER0016522 M446_3040
PA S1 unassigned subfamily S1C unassigned peptidases MER0121108 M446_5887
PA S1 unassigned subfamily S1C unassigned peptidases MER0121133 M446_6421
PA S1 unassigned subfamily S1D unassigned peptidases MER0121137 M446_6487
PA S1 unassigned family S1 unassigned peptidases MER0049859 M446_1300
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0023384 M446_2599
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0040331 M446_1812
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0121008 M446_3375
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0121095 M446_5508
PB C44 unassigned family C44 unassigned peptidases MER0060125 M446_0676
PB C44 unassigned family C44 unassigned peptidases MER0022498 M446_2680
PB C44 unassigned family C44 unassigned peptidases MER0121086 M446_5266
PB S45 S45.003 cephalosporin C acylase precursor MER0109620 M446_4245
PB T1 T01.006 HslV component of HslUV peptidase MER0061285 hslV M446_0256
PB T1 unassigned family T1 unassigned peptidases MER0121149 M446_6767
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107393 M446_4553
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0121063 M446_4674
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107524 M446_2556
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0116964 M446_2846
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0121073 M446_4891
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0061758 M446_0052
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0121090 M446_5396
PC C26 C26.957 GMP synthase MER0056252 guaA M446_0964
PC C26 C26.964 CTP synthetase MER0121091 pyrG M446_5402
PC C26 unassigned family C26 unassigned peptidases MER0034995 M446_1855
PC C26 unassigned family C26 unassigned peptidases MER0121049 M446_4275
PC C26 unassigned family C26 unassigned peptidases MER0121151 M446_6777
PC C26 unassigned family C26 unassigned peptidases MER0121152 M446_6792
PC C26 unassigned family C26 unassigned peptidases MER0440643 carA M446_3210
PC C56 C56.001 PfpI peptidase MER0121094 M446_5496
PC C56 C56.004 YDR533C putative peptidase MER0060126 M446_0640
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0060753 M446_0421
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0047816 M446_1650
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0121022 M446_3567
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0121069 M446_4875
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0121070 M446_4876
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0121097 M446_5603
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0034365 M446_2093
PE T5 T05.001 ornithine acetyltransferase precursor MER0121068 argJ M446_4809
SB S8 unassigned subfamily S8A unassigned peptidases MER0060098 M446_0736
SB S8 unassigned subfamily S8B unassigned peptidases MER1290738
SC S9 S09.010 oligopeptidase B MER0121053 M446_4444
SC S9 S09.951 brefeldin A esterase MER0001352 M446_3261
SC S9 S09.952 acyl-protein thioesterase 1 (Schizosaccharomyces pombe) MER0121071 M446_4879
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0061071 M446_0400
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0034477 M446_2042
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121016 M446_3448
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121026 M446_3685
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121100 M446_5706
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121129 M446_6240
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121135 M446_6483
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0121136 M446_6483
SC S9 unassigned subfamily S9A unassigned peptidases MER0121143 M446_6607
SC S9 unassigned subfamily S9C unassigned peptidases MER0061736 M446_0063
SC S9 unassigned subfamily S9C unassigned peptidases MER0060135 M446_0557
SC S9 unassigned subfamily S9C unassigned peptidases MER0054346 M446_1026
SC S9 unassigned subfamily S9C unassigned peptidases MER0027449 M446_2250
SC S9 unassigned subfamily S9C unassigned peptidases MER0015608 M446_3092
SC S9 unassigned subfamily S9C unassigned peptidases MER0121036 M446_4055
SC S9 unassigned subfamily S9C unassigned peptidases MER0121078 M446_5090
SC S9 unassigned subfamily S9C unassigned peptidases MER0121080 M446_5111
SC S9 unassigned subfamily S9C unassigned peptidases MER0121126 M446_6153
SC S9 unassigned family S9 unassigned peptidases MER0056217 M446_0965
SC S9 unassigned family S9 unassigned peptidases MER0121045 M446_4230
SC S9 unassigned family S9 unassigned peptidases MER0121058 M446_4585
SC S9 unassigned family S9 unassigned peptidases MER0121093 M446_5487
SC S9 unassigned family S9 unassigned peptidases MER0088005 M446_7027
SC S9 unassigned family S9 unassigned peptidases MER0213843 M446_0665
SC S10 unassigned family S10 unassigned peptidases MER0121092 M446_5407
SC S15 unassigned family S15 unassigned peptidases MER0121064 M446_4675
SC S33 S33.010 SCO7095-type peptidase MER0121155 M446_6949
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0060607 M446_0531
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0053881 M446_1041
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0048376 M446_1520
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0041505 M446_1736
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0038719 M446_1843
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0121018 M446_3496
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0121054 M446_4449
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0121117 M446_6061
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214867 M446_0781
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215366 M446_1566
SC S33 unassigned family S33 unassigned peptidases MER0061400 M446_0161
SC S33 unassigned family S33 unassigned peptidases MER0061704 M446_0161
SC S33 unassigned family S33 unassigned peptidases MER0061399 M446_0169
SC S33 unassigned family S33 unassigned peptidases MER0060876 M446_0411
SC S33 unassigned family S33 unassigned peptidases MER0060093 M446_0741
SC S33 unassigned family S33 unassigned peptidases MER0060014 M446_0785
SC S33 unassigned family S33 unassigned peptidases MER0060003 M446_0787
SC S33 unassigned family S33 unassigned peptidases MER0059975 M446_0880
SC S33 unassigned family S33 unassigned peptidases MER0052671 metX M446_1108
SC S33 unassigned family S33 unassigned peptidases MER0041498 M446_1738
SC S33 unassigned family S33 unassigned peptidases MER0034796 M446_1905
SC S33 unassigned family S33 unassigned peptidases MER0024837 M446_2400
SC S33 unassigned family S33 unassigned peptidases MER0024741 M446_2535
SC S33 unassigned family S33 unassigned peptidases MER0121027 M446_3733
SC S33 unassigned family S33 unassigned peptidases MER0121035 M446_3950
SC S33 unassigned family S33 unassigned peptidases MER0121047 M446_4244
SC S33 unassigned family S33 unassigned peptidases MER0121061 M446_4655
SC S33 unassigned family S33 unassigned peptidases MER0121082 M446_5208
SC S33 unassigned family S33 unassigned peptidases MER0121112 M446_5919
SC S33 unassigned family S33 unassigned peptidases MER0121116 M446_6057
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0048381 M446_1390
SE S11 unassigned family S11 unassigned peptidases MER0026062 M446_2257
SE S11 unassigned family S11 unassigned peptidases MER0117513 M446_6277
SE S11 unassigned family S11 unassigned peptidases MER0121141 M446_6593
SE S12 S12.950 esterase EstB MER0019745 M446_2694
SE S12 S12.950 esterase EstB MER0121088 M446_5348
SE S12 S12.950 esterase EstB MER0117241 M446_6825
SF S24 S24.001 repressor LexA MER0121147 lexA M446_6716
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER0001402 M446_3256
SF S24 unassigned family S24 unassigned peptidases MER0121037 M446_4082
SF S26 S26.001 signal peptidase I MER0105284 M446_6615
SJ S16 S16.001 Lon-A peptidase MER0120111 M446_6585
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0023385 M446_2597
SK S14 S14.001 peptidase Clp (type 1) MER0120110 clpP1 M446_2322
SK S14 S14.001 peptidase Clp (type 1) MER0121140 clpP2 M446_6583
SK S41 S41.004 C-terminal processing peptidase-3 MER0117821 M446_4223
SK S41 unassigned subfamily S41B unassigned peptidases MER0121134 M446_6483
SK S49 S49.003 protein C (bacteriophage lambda) MER0121040 M446_4143
SK S49 unassigned subfamily S49B unassigned peptidases MER0024764 M446_2500
SK S49 unassigned subfamily S49B unassigned peptidases MER0019606 M446_2757
ST S54 unassigned family S54 unassigned peptidases MER0003451 M446_3232

GENOME ANALYSIS: Comparison with 14 completely sequenced genomes from family Methylobacteriaceae
Family Comment
C14 lineage specific expansion (9 homologues)
M10 significant presence (3 homologues)
M19 significant presence (1 homologues)
M26 significant presence (1 homologues)
M38 lineage specific expansion (22 homologues)
S9 lineage specific expansion (27 homologues)
S24 significant decrease in homologues (3 homologues)
T3 lineage specific expansion (5 homologues)

feedback
Page created 8-September-2023

EMBL-EBI logo

© 2023 EBI
Terms of use