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MEROPS SUBMISSIONS

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information

Pedobacter sp. BAL39

Taxonomy
Taxonomy database identifier: 391596
Superkingdom Bacteria
Phylum Bacteroidetes
Class Sphingobacteria
Order Sphingobacteriales
Family Sphingobacteriaceae
Genus Pedobacter
Species sp. BAL39
Peptidase View peptidase sequences from Pedobacter sp. BAL39
Count of known and putative peptidases: 80, non-peptidase homologues 22
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1380866
AC A8 unassigned family A8 unassigned peptidases MER0292885 lspA PBAL39_09291
AC A8 unassigned family A8 unassigned peptidases MER0323525 lspA PBAL39_17829
CA C1 unassigned subfamily C1A unassigned peptidases MER0106135 PBAL39_03759
CA C1 unassigned subfamily C1A unassigned peptidases MER0428489
CA C1 unassigned subfamily C1B unassigned peptidases MER1167412
CA C39 C39.001 bacteriocin-processing peptidase MER0118740 PBAL39_02825
CA C39 C39.001 bacteriocin-processing peptidase MER0140820 PBAL39_14869
CA C39 C39.001 bacteriocin-processing peptidase MER0144789 PBAL39_15344
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243966
CO C40 C40.004 spr peptidase MER0117976 PBAL39_10346
CO C40 C40.004 spr peptidase MER0453766
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0122324 PBAL39_21460
CO C40 unassigned family C40 unassigned peptidases MER0453765
G- G5 unassigned family G5 unassigned peptidases MER0938231 PBAL39_11517
G- G5 unassigned family G5 unassigned peptidases MER0937877 PBAL39_06186
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0329269
MA M1 unassigned family M1 unassigned peptidases MER0464962
MA M1 unassigned family M1 unassigned peptidases MER0464963
MA M1 unassigned family M1 unassigned peptidases MER0464964
MA M1 unassigned family M1 unassigned peptidases MER0464965
MA M1 unassigned family M1 unassigned peptidases MER0464966
MA M1 unassigned family M1 unassigned peptidases MER0464967
MA M1 unassigned family M1 unassigned peptidases MER0335099 PBAL39_13270
MA M1 unassigned family M1 unassigned peptidases MER0464968
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0103303 PBAL39_20935
MA M3 unassigned subfamily M3C unassigned peptidases MER0164708
MA M13 unassigned family M13 unassigned peptidases MER0108960 PBAL39_12508
MA M13 unassigned family M13 unassigned peptidases MER0109924 PBAL39_04054
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0105700 ftsH PBAL39_11462
MA M48 unassigned family M48 unassigned peptidases MER0885726 PBAL39_19484
MA M48 unassigned family M48 unassigned peptidases MER0118741 PBAL39_17096
MA M56 unassigned family M56 unassigned peptidases MER0934242 PBAL39_10071
MA M56 unassigned family M56 unassigned peptidases MER0933996 PBAL39_06296
MA M61 unassigned family M61 unassigned peptidases MER0120537 PBAL39_04283
MA M78 unassigned family M78 unassigned peptidases MER0909883 PBAL39_08569
MA M90 unassigned family M90 unassigned peptidases MER0286962 PBAL39_10231
MA M97 unassigned family M97 unassigned peptidases MER0494912
MA M97 unassigned family M97 unassigned peptidases MER0486443
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0468986
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0836455 PBAL39_03739
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469218 PBAL39_10686
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469296
MC M14 unassigned subfamily M14B unassigned peptidases MER0242631
MD M15 unassigned subfamily M15D unassigned peptidases MER0123289 PBAL39_11612
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0391118 PBAL39_24995
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0929059 PBAL39_25000
ME M16 unassigned subfamily M16B unassigned peptidases MER0143343 PBAL39_11352
ME M16 unassigned subfamily M16B unassigned peptidases MER0391038 PBAL39_00115
ME M16 unassigned subfamily M16B unassigned peptidases MER0391259 PBAL39_24470
ME M16 unassigned family M16 unassigned peptidases MER0470019
MG M24 unassigned subfamily M24A unassigned peptidases MER0395027 map PBAL39_14954
MG M24 unassigned subfamily M24A unassigned peptidases MER0176082 map PBAL39_08320
MG M24 unassigned subfamily M24B unassigned peptidases MER0481891
MH M20 unassigned subfamily M20A unassigned peptidases MER0141851 PBAL39_12082
MH M20 unassigned subfamily M20B unassigned peptidases MER0105422 PBAL39_10676
MH M20 unassigned subfamily M20C unassigned peptidases MER0100587 PBAL39_06426
MH M20 unassigned family M20D unassigned peptidases MER0119132 PBAL39_09786
MH M28 unassigned subfamily M28B unassigned peptidases MER0105975 PBAL39_22145
MH M28 unassigned subfamily M28D unassigned peptidases MER0100711 PBAL39_10061
MH M28 unassigned subfamily M28F unassigned peptidases MER0123613 PBAL39_12042
MH M28 unassigned subfamily M28F unassigned peptidases MER0175798 PBAL39_10721
MH M28 unassigned family M28 unassigned peptidases MER0105973 PBAL39_08696
MH M28 unassigned family M28 unassigned peptidases MER0136173 PBAL39_19709
MH M28 unassigned family M28 unassigned peptidases MER0105974 PBAL39_04773
MH M42 unassigned family M42 unassigned peptidases MER0136564 PBAL39_08265
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0341887 PBAL39_23607
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0873701 PBAL39_21195
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860843 PBAL39_01167
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868213 nagA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867136 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0108036 PBAL39_12312
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0108037 PBAL39_12312
MM M50 unassigned family M50 unassigned peptidases MER0894549 PBAL39_21350
MO M23 unassigned subfamily M23B unassigned peptidases MER0189765 PBAL39_25380
MO M23 unassigned family M23 unassigned peptidases MER0479393 PBAL39_06781
PA S1 S01.453 MucD peptidase MER0408148
PA S1 unassigned subfamily S1B unassigned peptidases MER0964352 PBAL39_19320
PA S1 unassigned subfamily S1C unassigned peptidases MER0208489
PA S1 unassigned subfamily S1C unassigned peptidases MER0211369 PBAL39_24595
PA S46 S46.003 dipeptidyl-peptidase BII (Pseudoxanthomonas mexicana) MER0109854 PBAL39_01542
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455900
PB C44 unassigned family C44 unassigned peptidases MER0458828
PB S45 S45.003 cephalosporin C acylase precursor MER0108961 PBAL39_21920
PB T2 unassigned family T2 unassigned peptidases MER1096223 PBAL39_10366
PB T2 unassigned family T2 unassigned peptidases MER1095061 PBAL39_07860
PB T2 unassigned family T2 unassigned peptidases MER0126216 PBAL39_01712
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107399 ggt PBAL39_17219
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0108118 PBAL39_03045
PC C26 C26.957 GMP synthase MER0440905 guaA
PC C26 C26.959 TRP3 protein MER0438589
PC C26 C26.964 CTP synthetase MER0448244
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444971
PC C26 unassigned family C26 unassigned peptidases MER0449054
PC C26 unassigned family C26 unassigned peptidases MER0443532
PC C56 C56.001 PfpI peptidase MER0136657 PBAL39_05593
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0164662
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0139844 PBAL39_19479
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1067178 PBAL39_10371
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1066173 PBAL39_07855
SB S8 unassigned subfamily S8A unassigned peptidases MER0164199 PBAL39_04353
SB S8 unassigned subfamily S8A unassigned peptidases MER0191931 PBAL39_03277
SC S9 S09.010 oligopeptidase B MER0192181 PBAL39_11297
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0144866 PBAL39_18224
SC S9 S09.017 prolyl tripeptidyl peptidase MER0107966 PBAL39_12513
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997234 PBAL39_16059
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001799 PBAL39_04184
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0122219 PBAL39_09596
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213503 PBAL39_21125
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0175848
SC S9 unassigned subfamily S9A unassigned peptidases MER0113475 PBAL39_17839
SC S9 unassigned subfamily S9B unassigned peptidases MER0141494 PBAL39_13762
SC S9 unassigned subfamily S9B unassigned peptidases MER0125019 PBAL39_11717
SC S9 unassigned subfamily S9B unassigned peptidases MER0107967 PBAL39_09841
SC S9 unassigned subfamily S9C unassigned peptidases MER0192590 PBAL39_18389
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022419 PBAL39_09596
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025684 PBAL39_04184
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020363 PBAL39_12513
SC S33 unassigned family S33 unassigned peptidases MER0214769
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0971278 PBAL39_09056
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0989098 PBAL39_06676
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1009383 PBAL39_02855
SE S12 unassigned family S12 unassigned peptidases MER1023151 PBAL39_00330
SE S12 unassigned family S12 unassigned peptidases MER1004043 PBAL39_14189
SE S12 unassigned family S12 unassigned peptidases MER0140709 PBAL39_17359
SE S12 unassigned family S12 unassigned peptidases MER0123013 PBAL39_02890
SE S12 unassigned family S12 unassigned peptidases MER0120538 PBAL39_10401
SE S12 unassigned family S12 unassigned peptidases MER0354754 PBAL39_22932
SE S12 unassigned family S12 unassigned peptidases MER0355258 PBAL39_07355
SE S12 unassigned family S12 unassigned peptidases MER0355772 PBAL39_08916
SE S13 unassigned family S13 unassigned peptidases MER0105518 PBAL39_03894
SE S13 unassigned family S13 unassigned peptidases MER0143160 PBAL39_11607
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1041236 PBAL39_20149
SF S26 unassigned subfamily S26A unassigned peptidases MER0105354 PBAL39_23908
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1030511 PBAL39_10536
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1039381 PBAL39_10990
SJ S16 unassigned family S16 unassigned peptidases MER0109137 PBAL39_06111
SK S14 S14.001 peptidase Clp (type 1) MER0358682 clpP PBAL39_20715
SK S41 S41.001 C-terminal processing peptidase-1 MER0105204 PBAL39_10356
SK S41 S41.004 C-terminal processing peptidase-3 MER0105202 PBAL39_03389
SK S41 S41.004 C-terminal processing peptidase-3 MER0105203 PBAL39_04638
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER1062165 PBAL39_09041
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1046814 PBAL39_15554
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1061576 PBAL39_18779
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1045605 PBAL39_19714
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0175846
SK S41 non-peptidase homologue subfamily S41B non-peptidase homologues MER0175847
SK S41 unassigned subfamily S41A unassigned peptidases MER1055553 PBAL39_15864
SK S41 unassigned subfamily S41A unassigned peptidases MER1057077 PBAL39_05578
SK S41 unassigned subfamily S41A unassigned peptidases MER0105517 PBAL39_24525
SK S49 unassigned subfamily S49A unassigned peptidases MER1350123
SK S49 unassigned subfamily S49B unassigned peptidases MER0105110 PBAL39_20675
SS S66 unassigned family S66 unassigned peptidases MER0144865 PBAL39_10905
SS S66 unassigned family S66 unassigned peptidases MER0144790 PBAL39_02367
ST S54 S54.025 At5g25752 rhomboid peptidase MER0109835 PBAL39_10691
ST S54 unassigned family S54 unassigned peptidases MER1077256 PBAL39_08901
ST S54 unassigned family S54 unassigned peptidases MER1082924 PBAL39_08906
U- U32 U32.001 collagenase (Porphyromonas-type) MER0142334 PBAL39_20895

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from family Sphingobacteriaceae
Family Comment
A39 significant presence (1 homologues)
M78 significant presence (1 homologues)
S11 significant decrease in homologues (1 homologues)
S41 lineage specific expansion (12 homologues)
U32 significant presence (1 homologues)

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