Methylorubrum populi

Taxonomy
Taxonomy database identifier: 223967
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Genus Methylobacterium
Family Methylobacteriaceae
Species populi
Peptidase View peptidase sequences from Methylorubrum populi
Count of known and putative peptidases: 123, non-peptidase homologues 60
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 A32.001 PerP peptidase (Caulobacter sp.) MER0241843 Mpop_0841
AC A8 unassigned family A8 unassigned peptidases MER0122141 lspA1 Mpop_2281
AC A8 unassigned family A8 unassigned peptidases MER0125621 lspA2 Mpop_4118
AD A24 unassigned subfamily A24A unassigned peptidases MER0079087 Mpop_2406
CA C39 C39.005 colicin V processing peptidase MER0077476 Mpop_4552
CD C14 unassigned subfamily C14B unassigned peptidases MER0079741 Mpop_0721
CF C15 unassigned family C15 unassigned peptidases MER0126620 Mpop_0373
CL C60 unassigned subfamily C60A unassigned peptidases MER0079501 Mpop_1394
CL C82 C82.003 ykuD transpeptidase MER0080101 Mpop_0121
CL C82 C82.003 ykuD transpeptidase MER0079266 Mpop_1958
CL C82 C82.003 ykuD transpeptidase MER0079076 Mpop_2490
CL C82 C82.003 ykuD transpeptidase MER0078844 Mpop_2770
CL C82 C82.003 ykuD transpeptidase MER0078717 Mpop_3003
CL C82 C82.003 ykuD transpeptidase MER0078714 Mpop_3016
CL C82 C82.003 ykuD transpeptidase MER0078128 Mpop_3529
CL C82 C82.003 ykuD transpeptidase MER0077635 Mpop_4144
CL C82 unassigned subfamily C82A unassigned peptidases MER0079930 Mpop_0378
CL C82 unassigned subfamily C82A unassigned peptidases MER0079762 Mpop_0481
CL C82 unassigned subfamily C82A unassigned peptidases MER0078730 Mpop_2919
CL C82 unassigned subfamily C82A unassigned peptidases MER0243957 Mpop_4119
CL C82 unassigned subfamily C82A unassigned peptidases MER0243916 Mpop_4971
CL C82 unassigned subfamily C82A unassigned peptidases MER0243955 Mpop_5272
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0079722 Mpop_0782
CO C40 unassigned family C40 unassigned peptidases MER0078860 Mpop_2672
CO C40 unassigned family C40 unassigned peptidases MER0717607 Mpop_1415
G- G5 unassigned family G5 unassigned peptidases MER0937081 Mpop_2783
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0079747 Mpop_0513
MA M3 unassigned subfamily M3A unassigned peptidases MER0103319 Mpop_0483
MA M3 unassigned family M3 unassigned peptidases MER0078789 Mpop_2877
MA M32 unassigned family M32 unassigned peptidases MER0118751 Mpop_0351
MA M41 unassigned family M41 unassigned peptidases MER0077921 Mpop_3837
MA M41 unassigned family M41 unassigned peptidases MER0105533 ftsH Mpop_5386
MA M48 unassigned subfamily M48C unassigned peptidases MER0079263 Mpop_1976
MA M48 unassigned subfamily M48C unassigned peptidases MER0078279 Mpop_3503
MD M15 unassigned subfamily M15D unassigned peptidases MER0122026 Mpop_0763
MD M74 unassigned family M74 unassigned peptidases MER0105238 Mpop_3484
ME M16 M16.019 YMXG peptidase MER0389510 E8E01_11225
ME M16 M16.019 YMXG peptidase MER0079108 Mpop_2283
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0079097 Mpop_2284
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0079098 Mpop_2284
ME M16 unassigned subfamily M16A unassigned peptidases MER0478042 E8E01_16070
ME M16 unassigned subfamily M16B unassigned peptidases MER0078287 Mpop_3449
MF M17 unassigned family M17 unassigned peptidases MER0078668 Mpop_3158
MF M17 unassigned family M17 unassigned peptidases MER0105878 pepA Mpop_3937
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0079131 Mpop_2162
MG M24 M24.009 aminopeptidase P1 MER0094830 Mpop_4994
MG M24 unassigned subfamily M24A unassigned peptidases MER0079600 Mpop_1201
MH M20 unassigned subfamily M20A unassigned peptidases MER0079902 Mpop_0439
MH M20 unassigned subfamily M20A unassigned peptidases MER0119947 dapE Mpop_1601
MH M20 unassigned family M20D unassigned peptidases MER0123684 Mpop_2815
MH M20 unassigned family M20D unassigned peptidases MER0123571 Mpop_4834
MH M20 unassigned subfamily M20F unassigned peptidases MER0079726 Mpop_0757
MH M20 unassigned family M20 unassigned peptidases MER0077680 Mpop_4007
MJ M38 M38.982 urease MER0079609 ureC1 Mpop_1136
MJ M38 M38.982 urease MER0078557 ureC2 Mpop_3205
MJ M38 M38.982 urease MER0094807 ureC3 Mpop_5114
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0079669 Mpop_1087
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0079610 Mpop_1121
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0079548 Mpop_1235
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0079539 Mpop_1247
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0078256 Mpop_3513
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0078028 ade Mpop_3626
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0077594 Mpop_4218
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0077111 Mpop_4820
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0077103 Mpop_4842
MM M50 unassigned subfamily M50B unassigned peptidases MER0079178 Mpop_2042
MM M50 unassigned subfamily M50B unassigned peptidases MER0119052 Mpop_3750
MM M50 unassigned family M50 unassigned peptidases MER0079096 Mpop_2358
MO M23 M23.009 Mername-AA292 peptidase MER0124084 Mpop_3167
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0077263 Mpop_4750
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0079115 Mpop_2245
MO M23 unassigned subfamily M23B unassigned peptidases MER0079684 Mpop_0955
MQ M29 M29.001 aminopeptidase T MER0126040 Mpop_3670
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405462 flhB Mpop_0616
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405257 Mpop_2633
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0077557 Mpop_4358
PA S1 unassigned subfamily S1A unassigned peptidases MER0079479 Mpop_1425
PA S1 unassigned subfamily S1A unassigned peptidases MER0079467 Mpop_1426
PA S1 unassigned subfamily S1C unassigned peptidases MER0079116 Mpop_2179
PA S1 unassigned subfamily S1C unassigned peptidases MER0078827 Mpop_2778 Mpop_2778
PA S1 unassigned subfamily S1C unassigned peptidases MER0094779 Mpop_5235
PA S1 unassigned subfamily S1C unassigned peptidases MER0094775 Mpop_5341
PA S1 unassigned subfamily S1C unassigned peptidases MER0903781 Mpop_5124
PA S1 unassigned subfamily S1C unassigned peptidases MER1271981
PA S1 unassigned subfamily S1C unassigned peptidases MER1273870
PA S1 unassigned family S1 unassigned peptidases MER0079740 Mpop_0726
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0094761 Mpop_5410
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0077498 Mpop_4407
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0078286 Mpop_3462
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0077383 Mpop_4640
PB C44 unassigned family C44 unassigned peptidases MER0079357 Mpop_1575
PB C44 unassigned family C44 unassigned peptidases MER0077664 Mpop_4035
PB C44 unassigned family C44 unassigned peptidases MER0094831 Mpop_4975
PB C44 unassigned family C44 unassigned peptidases MER0094759 Mpop_5411
PB T1 T01.006 HslV component of HslUV peptidase MER0123097 Mpop_0623
PB T1 unassigned family T1 unassigned peptidases MER0079130 Mpop_2172
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107563 Mpop_0962
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0107562 Mpop_1970
PB T3 unassigned family T3 unassigned peptidases MER0107420 Mpop_1540
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0077525 Mpop_4378
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0094792 Mpop_5210
PC C26 C26.957 GMP synthase MER0078675 guaA Mpop_3113
PC C26 C26.964 CTP synthetase MER0094793 pyrG Mpop_5202
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0079745 carA Mpop_0591
PC C26 unassigned family C26 unassigned peptidases MER0080053 Mpop_0165
PC C26 unassigned family C26 unassigned peptidases MER0079743 Mpop_0692
PC C26 unassigned family C26 unassigned peptidases MER0079079 Mpop_2480
PC C26 unassigned family C26 unassigned peptidases MER0077987 Mpop_3633
PC C56 C56.001 PfpI peptidase MER0079689 Mpop_0808
PC C56 C56.001 PfpI peptidase MER0080049 Mpop_0320
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0079924 Mpop_0431
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0079746 Mpop_0574
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0079742 Mpop_0719
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0079356 Mpop_1576
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0078141 Mpop_3518
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0077747 Mpop_3990
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0077145 Mpop_4768
PE T5 T05.001 ornithine acetyltransferase precursor MER0079925 argJ Mpop_0390
SB S8 unassigned subfamily S8B unassigned peptidases MER1289830
SC S9 S09.010 oligopeptidase B MER0079751 Mpop_0502
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0123868 Mpop_0377
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0079416 Mpop_1484
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0079335 Mpop_1756
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0078581 Mpop_3187
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0077976 Mpop_3788
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0077320 Mpop_4691
SC S9 unassigned family S9 unassigned peptidases MER0079603 Mpop_1148
SC S9 unassigned family S9 unassigned peptidases MER0079348 Mpop_1614
SC S9 unassigned family S9 unassigned peptidases MER0079293 Mpop_1821
SC S9 unassigned family S9 unassigned peptidases MER0079166 Mpop_2114
SC S9 unassigned family S9 unassigned peptidases MER0078670 Mpop_3115
SC S9 unassigned family S9 unassigned peptidases MER0078431 Mpop_3349
SC S9 unassigned family S9 unassigned peptidases MER0077490 Mpop_4455 Mpop_4455
SC S9 unassigned family S9 unassigned peptidases MER0094836 Mpop_4893
SC S10 unassigned family S10 unassigned peptidases MER0094795 Mpop_5196
SC S15 unassigned family S15 unassigned peptidases MER0079632 Mpop_1103
SC S33 S33.010 SCO7095-type peptidase MER0079429 Mpop_1452
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0079683 rutD Mpop_1078
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0079595 Mpop_1225
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0079438 Mpop_1448
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0079337 Mpop_1668
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0078498 Mpop_3286
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0077592 Mpop_4298
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0077589 Mpop_4324
SC S33 unassigned family S33 unassigned peptidases MER0079859 Mpop_0445
SC S33 unassigned family S33 unassigned peptidases MER0079411 metX Mpop_1534
SC S33 unassigned family S33 unassigned peptidases MER0078811 Mpop_2865
SC S33 unassigned family S33 unassigned peptidases MER0078580 Mpop_3199
SC S33 unassigned family S33 unassigned peptidases MER0078439 Mpop_3327
SC S33 unassigned family S33 unassigned peptidases MER0078115 Mpop_3567
SC S33 unassigned family S33 unassigned peptidases MER0077945 Mpop_3823
SC S33 unassigned family S33 unassigned peptidases MER0077809 Mpop_3910
SC S33 unassigned family S33 unassigned peptidases MER0077761 Mpop_3925
SC S33 unassigned family S33 unassigned peptidases MER0077487 Mpop_4548
SC S33 unassigned family S33 unassigned peptidases MER0077142 Mpop_4783
SC S33 unassigned family S33 unassigned peptidases MER0094818 Mpop_5072
SE S11 unassigned family S11 unassigned peptidases MER0119053 Mpop_1160
SE S11 unassigned family S11 unassigned peptidases MER0078703 Mpop_3041
SE S11 unassigned family S11 unassigned peptidases MER0094769 Mpop_5343
SE S12 S12.006 class C beta-lactamase MER0079417 Mpop_1481
SE S12 S12.950 esterase EstB MER0094833 Mpop_4911
SE S12 unassigned family S12 unassigned peptidases MER0118900 Mpop_3615
SF S24 S24.001 repressor LexA MER0119707 lexA Mpop_5225
SF S24 S24.003 UmuD protein MER0079939 Mpop_0340
SF S24 unassigned family S24 unassigned peptidases MER0079167 Mpop_2060
SF S24 unassigned family S24 unassigned peptidases MER1332039 umuD
SF S26 S26.001 signal peptidase I MER0105309 Mpop_2231
SF S26 S26.014 TraF peptidase MER0117008 Mpop_3080
SF S26 unassigned subfamily S26A unassigned peptidases MER1335131
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0094750 Mpop_5466
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0079439 Mpop_1428
SJ S16 S16.001 Lon-A peptidase MER0109430 Mpop_2373
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0077494 Mpop_4409
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0079322 Mpop_1815
SJ S16 unassigned family S16 unassigned peptidases MER0108866 Mpop_3752
SK S14 S14.001 peptidase Clp (type 1) MER0118899 clpP Mpop_2371
SK S41 S41.004 C-terminal processing peptidase-3 MER0125328 Mpop_2244
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0124979 Mpop_3297
SK S49 unassigned subfamily S49B unassigned peptidases MER0120467 Mpop_0205
ST S54 unassigned family S54 unassigned peptidases MER0109821 Mpop_2217

GENOME ANALYSIS: Comparison with 14 completely sequenced genomes from family Methylobacteriaceae
Family Comment
M20 significant decrease in homologues (6 homologues)
M23 significant decrease in homologues (4 homologues)
S8 significant decrease in homologues (1 homologues)