Sphingobium yanoikuyae

Taxonomy
Taxonomy database identifier: 13690
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Sphingomonadaceae
Genus Sphingobium
Species yanoikuyae
Peptidase View peptidase sequences from Sphingobium yanoikuyae
Count of known and putative peptidases: 73, non-peptidase homologues 12
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0234306
AC A8 unassigned family A8 unassigned peptidases MER0227964 lspA HMPREF9718_04410
AD A24 unassigned subfamily A24A unassigned peptidases MER0332915 CP98_02893/HMPREF9718_00430/IH86_
AD A24 unassigned subfamily A24A unassigned peptidases MER0271716 HMPREF9718_03840
AD A24 unassigned subfamily A24B unassigned peptidases MER0427285 HMPREF9718_00956
CA C1 unassigned family C1 unassigned peptidases MER0428742
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0717133 HMPREF9718_00854
CA C96 C96.001 McjB peptidase MER0745914 CP98_03122
CA C96 C96.001 McjB peptidase MER0745793 CP98_00514
CA C96 C96.001 McjB peptidase MER0745917 IH86_21640
CA C96 C96.001 McjB peptidase MER0745943 HMPREF9718_04093
CA C96 C96.001 McjB peptidase MER0745957 HMPREF9718_02539
CA C96 non-peptidase homologue family C96 non-peptidase homologues MER0745918 IH86_01705
CL C82 unassigned subfamily C82A unassigned peptidases MER0737560 CP98_04129
CL C82 unassigned subfamily C82A unassigned peptidases MER0737642 CP98_02874
CL C82 unassigned subfamily C82A unassigned peptidases MER0321939
CL C82 unassigned subfamily C82A unassigned peptidases MER0462770 SyanX_10554
CL C82 unassigned subfamily C82A unassigned peptidases MER0462771
CL C82 unassigned subfamily C82A unassigned peptidases MER0321926 SyanX_18851
CL C82 unassigned subfamily C82A unassigned peptidases MER0321910
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0305375
G- G5 unassigned family G5 unassigned peptidases MER0911835 IH86_20550
G- G5 unassigned family G5 unassigned peptidases MER0936285 CP98_01865/HMPREF9718_04203/IH86_
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0333492
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0316579
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335360 pepN
MA M1 unassigned family M1 unassigned peptidases MER0334429
MA M2 unassigned family M2 unassigned peptidases MER0287056
MA M3 unassigned subfamily M3A unassigned peptidases MER0343853 HMPREF9718_02422
MA M13 unassigned family M13 unassigned peptidases MER0338687
MA M41 M41.001 FtsH peptidase MER0300753
MA M48 unassigned subfamily M48B unassigned peptidases MER0288382 HMPREF9718_01787
MA M48 unassigned subfamily M48C unassigned peptidases MER0886688 CP98_01653
MA M48 unassigned subfamily M48C unassigned peptidases MER0886826 HMPREF9718_02770/IH86_05920
MA M48 unassigned family M48 unassigned peptidases MER0295757
MA M56 unassigned family M56 unassigned peptidases MER0899783 HMPREF9718_03376
MA M61 M61.001 glycyl aminopeptidase MER0310198
MA M61 unassigned family M61 unassigned peptidases MER0900097 CP98_03863
MC M14 non-peptidase homologue subfamily M14A non-peptidase homologues MER0468821 SyanX_19156
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0309096
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0392542
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0392543
ME M16 unassigned subfamily M16B unassigned peptidases MER0391052
MF M17 unassigned family M17 unassigned peptidases MER0340047
MF M17 unassigned family M17 unassigned peptidases MER0340489
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0394016
MG M24 M24.009 aminopeptidase P1 MER0482664
MG M24 unassigned subfamily M24A unassigned peptidases MER0603838
MG M24 unassigned subfamily M24B unassigned peptidases MER0482663
MG M24 unassigned subfamily M24B unassigned peptidases MER0395941
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374716
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0797536 CP98_00237
MH M20 unassigned subfamily M20A unassigned peptidases MER0852669 HMPREF9718_04393
MH M20 unassigned subfamily M20A unassigned peptidases MER0369829
MH M20 unassigned subfamily M20A unassigned peptidases MER0473619 SyanX_10234
MH M20 unassigned subfamily M20A unassigned peptidases MER0302896 SyanX_14263
MH M20 unassigned family M20D unassigned peptidases MER0373379
MH M20 unassigned family M20 unassigned peptidases MER0302866
MH M20 unassigned family M20 unassigned peptidases MER0370057
MH M20 unassigned family M20 unassigned peptidases MER0474011
MH M28 non-peptidase homologue subfamily M28E non-peptidase homologues MER0321663
MH M28 unassigned subfamily M28E unassigned peptidases MER0212102
MH M28 unassigned subfamily M28E unassigned peptidases MER0322679
MH M28 unassigned subfamily M28E unassigned peptidases MER1077124
MH M28 unassigned subfamily M28E unassigned peptidases MER1077381
MH M28 unassigned subfamily M28E unassigned peptidases MER1073898
MH M28 unassigned subfamily M28E unassigned peptidases MER0086787 HMPREF9718_01339
MH M28 unassigned subfamily M28E unassigned peptidases MER0230985 HMPREF9718_00762
MH M28 unassigned subfamily M28E unassigned peptidases MER0204682 HMPREF9718_02198
MH M28 unassigned family M28 unassigned peptidases MER0194778
MH M28 unassigned family M28 unassigned peptidases MER0212222
MH M28 unassigned family M28 unassigned peptidases MER0194131 HMPREF9718_02660
MJ M19 M19.012 Caul_3875-type dipeptidase MER0323639 HMPREF9718_04187
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0341735
MJ M19 unassigned family M19 unassigned peptidases MER0831771
MJ M19 unassigned family M19 unassigned peptidases MER0290262
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874285 CP98_03536
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871033 CP98_03412
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868072 CP98_03417
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0858927 CP98_03419
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874470 CP98_03516
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861710 CP98_02845/IH86_20325
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863550 CP98_02722
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871404 IH86_22780
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859903 IH86_20030
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871829 IH86_12955
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861498 IH86_10490
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0861392 IH86_10515
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870781 IH86_10525
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865263 IH86_11035
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866359 IH86_08860
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874185 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860515 HMPREF9718_04492
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863510 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864819 HMPREF9718_04554
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860336 HMPREF9718_01461
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874852 HMPREF9718_01466
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0875126 HMPREF9718_01565
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865851 CP98_00718/HMPREF9718_00570
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867816 HMPREF9718_00514
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865354 HMPREF9718_01468
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863263 HMPREF9718_04233
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870605 HMPREF9718_01364
MM M50 unassigned subfamily M50A unassigned peptidases MER0897268 CP98_01395
MM M50 unassigned subfamily M50A unassigned peptidases MER0898546 IH86_16110
MM M50 unassigned subfamily M50A unassigned peptidases MER0891618 HMPREF9718_03568
MO M23 M23.009 Mername-AA292 peptidase MER0387671
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0388939
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480172
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0388766
MO M23 unassigned subfamily M23B unassigned peptidases MER0478689
MO M23 unassigned subfamily M23B unassigned peptidases MER0388335
MO M23 unassigned subfamily M23B unassigned peptidases MER0314483
MP M67 unassigned subfamily M67B unassigned peptidases MER0906629 CP98_02642
MP M67 unassigned subfamily M67B unassigned peptidases MER0907288 IH86_20195
MP M67 unassigned subfamily M67B unassigned peptidases MER0905190 HMPREF9718_00539
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0148481
MU M103 M103.UNW family M103 non-peptidase homologues MER0331984
MU M103 M103.UNW family M103 non-peptidase homologues MER0244815
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327363
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0956931 HMPREF9718_04525
PA S1 unassigned subfamily S1B unassigned peptidases MER0964338 CP98_00434/HMPREF9718_03259
PA S1 unassigned subfamily S1C unassigned peptidases MER0967283 CP98_00635
PA S1 unassigned subfamily S1C unassigned peptidases MER0953900 HMPREF9718_03305
PA S1 unassigned subfamily S1C unassigned peptidases MER0407786
PA S1 unassigned subfamily S1C unassigned peptidases MER0407534
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0457009
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0460257
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0457008
PB C44 unassigned family C44 unassigned peptidases MER0460258
PB C59 unassigned family C59 unassigned peptidases MER0330234
PB S45 S45.002 cephalosporin acylase precursor MER0312318
PB S45 S45.003 cephalosporin C acylase precursor MER1063472 CP98_04673
PB T1 T01.006 HslV component of HslUV peptidase MER0323684
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0378966
PB T3 unassigned family T3 unassigned peptidases MER0379922
PB T3 unassigned family T3 unassigned peptidases MER0379407
PB T3 unassigned family T3 unassigned peptidases MER0379525
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436651
PC C26 C26.957 GMP synthase MER0443325 guaA
PC C26 C26.964 CTP synthetase MER0450866 pyrG
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0447200 hisH
PC C26 unassigned family C26 unassigned peptidases MER0443012
PC C26 unassigned family C26 unassigned peptidases MER0449726
PC C56 C56.001 PfpI peptidase MER0310921
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0910360 CP98_05350
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0734482 CP98_04791
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0913203 CP98_04798
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0896101 CP98_00954
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0731753 HMPREF9718_03137
PE P1 unassigned family P01 unassigned peptidases MER0316966 PMI04_04244
PE T5 T05.001 ornithine acetyltransferase precursor MER0307637
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0977134 CP98_04605
SB S8 unassigned subfamily S8A unassigned peptidases MER0970995 CP98_01998
SB S8 unassigned subfamily S8A unassigned peptidases MER0981140 CP98_00354
SB S8 unassigned subfamily S8A unassigned peptidases MER0974790 IH86_15245
SB S8 unassigned subfamily S8A unassigned peptidases MER0984334 CP98_03263/IH86_09165
SB S8 unassigned subfamily S8A unassigned peptidases MER0980116 HMPREF9718_03186
SB S8 unassigned subfamily S8A unassigned peptidases MER0986596 HMPREF9718_03406
SB S8 unassigned subfamily S8A unassigned peptidases MER0990334 HMPREF9718_04293
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0490928 CP98_02464/IH86_03035
SC S9 S09.010 oligopeptidase B MER0490929
SC S9 S09.010 oligopeptidase B MER0490932
SC S9 S09.012 dipeptidyl-peptidase 5 MER0329062
SC S9 non-peptidase homologue subfamily S9A non-peptidase homologues MER0992250 CP98_00579
SC S9 non-peptidase homologue subfamily S9A non-peptidase homologues MER0994638 HMPREF9718_04125
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997280 IH86_02065
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1002033 HMPREF9718_00624
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1114408
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1115838
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1114435
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0404944
SC S9 unassigned subfamily S9A unassigned peptidases MER1021001 CP98_04400/HMPREF9718_01792/IH86_15745
SC S9 unassigned subfamily S9A unassigned peptidases MER1292045
SC S9 unassigned subfamily S9A unassigned peptidases MER1289533
SC S9 unassigned subfamily S9A unassigned peptidases MER0325973
SC S9 unassigned subfamily S9A unassigned peptidases MER0326013
SC S9 unassigned subfamily S9A unassigned peptidases MER0325894
SC S9 unassigned subfamily S9B unassigned peptidases MER0996795 CP98_04461
SC S9 unassigned subfamily S9B unassigned peptidases MER0999591 CP98_02983/HMPREF9718_04324/IH86_
SC S9 unassigned subfamily S9B unassigned peptidases MER1025677 HMPREF9718_01754
SC S9 unassigned subfamily S9B unassigned peptidases MER1299214
SC S9 unassigned subfamily S9C unassigned peptidases MER1304040
SC S9 unassigned subfamily S9C unassigned peptidases MER1303328
SC S9 unassigned subfamily S9C unassigned peptidases MER1116655
SC S9 unassigned subfamily S9C unassigned peptidases MER1299572
SC S9 unassigned subfamily S9C unassigned peptidases MER1116628
SC S9 unassigned subfamily S9C unassigned peptidases MER1114322
SC S9 unassigned subfamily S9C unassigned peptidases MER1303434
SC S9 unassigned subfamily S9C unassigned peptidases MER1302482
SC S9 unassigned subfamily S9C unassigned peptidases MER0404347
SC S9 unassigned subfamily S9D unassigned peptidases MER0692500 CP98_03560
SC S9 unassigned family S9 unassigned peptidases MER0996966 CP98_04143/HMPREF9718_01706
SC S9 unassigned family S9 unassigned peptidases MER0479174
SC S9 unassigned family S9 unassigned peptidases MER0329122
SC S9 unassigned family S9 unassigned peptidases MER0326535
SC S10 unassigned family S10 unassigned peptidases MER0490927
SC S10 unassigned family S10 unassigned peptidases MER0490930
SC S10 unassigned family S10 unassigned peptidases MER0490931
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022943 CP98_05371
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019262 CP98_03560
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1026834 CP98_03274/HMPREF9718_04304
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020619 IH86_09220
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021570 CP98_03988/HMPREF9718_00689
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019455 HMPREF9718_00187
SC S33 S33.001 prolyl aminopeptidase MER0307854
SC S33 unassigned family S33 unassigned peptidases MER0123085 xylF
SC S33 unassigned family S33 unassigned peptidases MER0402562
SC S33 unassigned family S33 unassigned peptidases MER0381716
SE S11 unassigned family S11 unassigned peptidases MER0949262 CP98_04965
SE S11 unassigned family S11 unassigned peptidases MER0948270 CP98_01083
SE S11 unassigned family S11 unassigned peptidases MER0949566 IH86_07960
SE S11 unassigned family S11 unassigned peptidases MER0351340
SE S12 unassigned family S12 unassigned peptidases MER1026722 CP98_04670
SE S12 unassigned family S12 unassigned peptidases MER1011217 CP98_04671
SE S12 unassigned family S12 unassigned peptidases MER0997830 IH86_06290
SE S12 unassigned family S12 unassigned peptidases MER1005311 IH86_04950
SE S12 unassigned family S12 unassigned peptidases MER1006203 IH86_01860
SE S12 unassigned family S12 unassigned peptidases MER1008813 HMPREF9718_02581
SE S12 unassigned family S12 unassigned peptidases MER0354275
SE S12 unassigned family S12 unassigned peptidases MER0354310
SE S12 unassigned family S12 unassigned peptidases MER0353575
SE S12 unassigned family S12 unassigned peptidases MER0354446
SE S13 unassigned family S13 unassigned peptidases MER1029216 CP98_04672
SF S24 S24.001 repressor LexA MER0375240
SF S24 unassigned family S24 unassigned peptidases MER1041199 CP98_01668/HMPREF9718_02755/IH86_05850
SF S26 S26.001 signal peptidase I MER0266376
SF S26 S26.001 signal peptidase I MER0333365
SF S26 S26.014 TraF peptidase MER1051762 CP98_00527
SF S26 S26.014 TraF peptidase MER1053430 IH86_14375
SF S26 S26.014 TraF peptidase MER1049298 IH86_01625
SF S26 S26.014 TraF peptidase MER0269844
SF S26 S26.014 TraF peptidase MER0290480 HMPREF9718_02461
SF S26 S26.014 TraF peptidase MER0290515 HMPREF9718_04105
SF S26 unassigned subfamily S26C unassigned peptidases MER1053400 CP98_03009
SH S78 unassigned family S78 unassigned peptidases MER1066603 CP98_05145/HMPREF9718_00789
SH S78 unassigned family S78 unassigned peptidases MER1087717 CP98_05001
SJ S16 S16.001 Lon-A peptidase MER0299860
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474601
SK S14 S14.001 peptidase Clp (type 1) MER0299331
SK S41 S41.004 C-terminal processing peptidase-3 MER0288718 HMPREF9718_02620
SK S41 unassigned subfamily S41A unassigned peptidases MER1051065 CP98_/HMPREF9718_04169/IH86_08540
SK S49 unassigned subfamily S49B unassigned peptidases MER1354255
SK S49 unassigned subfamily S49B unassigned peptidases MER1354574
SK S49 unassigned subfamily S49B unassigned peptidases MER0321370
SK S49 unassigned family S49 unassigned peptidases MER0298741
SO S74 unassigned family S74 unassigned peptidases MER0492284
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0320209
ST S54 unassigned family S54 unassigned peptidases MER0316092