Variovorax paradoxus

Taxonomy
Taxonomy database identifier: 34073
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Burkholderiales
Family Comamonadaceae
Species paradoxus
Genus Variovorax
Peptidase View peptidase sequences from Variovorax paradoxus
Count of known and putative peptidases: 190, non-peptidase homologues 52
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375761 rhsA
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1373895
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1371477
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376140
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1378252
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375884
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375787
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1373871
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376091
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1374728
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1370448
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1370896
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376332
A- A39 unassigned family A39 unassigned peptidases MER1370099
A- A39 unassigned family A39 unassigned peptidases MER1369192 rhsC_2
A- A39 unassigned family A39 unassigned peptidases MER1371115 rhsC_3
A- A39 unassigned family A39 unassigned peptidases MER1376405
A- A39 unassigned family A39 unassigned peptidases MER1372742
A- A39 unassigned family A39 unassigned peptidases MER1371277
A- A39 unassigned family A39 unassigned peptidases MER1370835
A- A39 unassigned family A39 unassigned peptidases MER1369755
A- A39 unassigned family A39 unassigned peptidases MER1370156
A- A39 unassigned family A39 unassigned peptidases MER1370268
A- A39 unassigned family A39 unassigned peptidases MER1370474
AA A32 unassigned family A32 unassigned peptidases MER0241763 Vapar_3770
AA A32 unassigned family A32 unassigned peptidases MER0241723 Varpa_4364
AC A8 unassigned family A8 unassigned peptidases MER0235315 lspA Varpa_1368
AC A8 unassigned family A8 unassigned peptidases MER0232580 lspA1 Vapar_1267
AC A8 unassigned family A8 unassigned peptidases MER0426585
AC A8 unassigned family A8 unassigned peptidases MER1153232
AC A8 unassigned family A8 unassigned peptidases MER1154814
AC A8 unassigned family A8 unassigned peptidases MER0324562 lspA Vapar_6224
AD A24 A24.001 type 4 prepilin peptidase 1 MER0287643 RT97_11445 Varpa_4834
AD A24 A24.001 type 4 prepilin peptidase 1 MER0184765 Vapar_4222
AD A24 unassigned subfamily A24A unassigned peptidases MER0660814 RT97_23220
AD A24 unassigned subfamily A24A unassigned peptidases MER0692139 RT97_26515
AD A24 unassigned subfamily A24A unassigned peptidases MER0661355 VAPA_1c46180
AD A24 unassigned subfamily A24A unassigned peptidases MER0426942 Vapar_1517
AD A24 unassigned subfamily A24A unassigned peptidases MER0426943 Vapar_4443
AD A24 unassigned subfamily A24A unassigned peptidases MER0508223
CA C1 unassigned subfamily C1A unassigned peptidases MER0702122 RT97_01770
CA C39 C39.005 colicin V processing peptidase MER0717189 RT97_29905
CA C51 unassigned family C51 unassigned peptidases MER0241462 Varpa_5740
CD C14 unassigned subfamily C14B unassigned peptidases MER0235296 Varpa_0560
CD C14 unassigned subfamily C14B unassigned peptidases MER0508217
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292399 pcp Vapar_4364
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0235298 pcp Varpa_0698
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0292398 pcp Varpa_5017
CF C15 unassigned family C15 unassigned peptidases MER0697008 pcp
CF C15 unassigned family C15 unassigned peptidases MER0697053 pcp
CL C82 unassigned subfamily C82A unassigned peptidases MER0738831 Vapar_4441/VAPA_1c46160
CO C40 C40.006 PgpA peptidase MER0185531 Vapar_2166
CO C40 C40.006 PgpA peptidase MER0185532 Varpa_4620
CO C40 unassigned family C40 unassigned peptidases MER0723301 RT97_06615
CO C40 unassigned family C40 unassigned peptidases MER0720236 RT97_21445
G- G5 unassigned family G5 unassigned peptidases MER0939241 Vapar_1223
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0346528
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0337423 Vapar_4776
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0342631 Varpa_5433
I- I104 I104.UPW family I104 unassigned peptidase inhibitors MER1384725
I- I104 I104.UPW family I104 unassigned peptidase inhibitors MER1384719
I- I104 I104.UPW family I104 unassigned peptidase inhibitors MER1384735
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335629 pepN Varpa_4380
MA M1 unassigned family M1 unassigned peptidases MER0335162 Vapar_3156
MA M1 unassigned family M1 unassigned peptidases MER0235395 Varpa_3579
MA M3 unassigned subfamily M3A unassigned peptidases MER0187733 Vapar_2158
MA M3 unassigned subfamily M3A unassigned peptidases MER0235398 Varpa_3734
MA M4 M04.023 zpx peptidase MER0822568 RT97_02965
MA M4 M04.023 zpx peptidase MER1194822
MA M4 M04.023 zpx peptidase MER1194229
MA M4 M04.023 zpx peptidase MER0187757 Vapar_5252
MA M4 M04.023 zpx peptidase MER0235281 Varpa_5967
MA M26 unassigned family M26 unassigned peptidases MER1245814
MA M41 M41.001 FtsH peptidase MER0235386 ftsH Varpa_3303
MA M41 unassigned family M41 unassigned peptidases MER0876674 RT97_16035
MA M41 unassigned family M41 unassigned peptidases MER0235369 Varpa_2819
MA M41 unassigned family M41 unassigned peptidases MER0510746
MA M41 unassigned family M41 unassigned peptidases MER0508246
MA M48 M48.002 HtpX peptidase MER0190905 htpX Vapar_0859
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0235263 Varpa_5441
MA M48 M48.A08 zmpste24 g.p. (Dictyostelium discoideum-type) MER0235394 Varpa_3533
MA M48 unassigned subfamily M48A unassigned peptidases MER0190830 Vapar_1482
MA M48 unassigned subfamily M48A unassigned peptidases MER0235320 Varpa_1638
MA M48 unassigned subfamily M48B unassigned peptidases MER0888468 VAPA_1c26570
MA M48 unassigned subfamily M48C unassigned peptidases MER0235293 Varpa_0270
MA M48 unassigned subfamily M48C unassigned peptidases MER0235279 Varpa_5897
MA M48 unassigned subfamily M48C unassigned peptidases MER0508216
MA M48 unassigned subfamily M48C unassigned peptidases MER0510858
MA M48 unassigned family M48 unassigned peptidases MER0887843 Vapar_2898
MA M48 unassigned family M48 unassigned peptidases MER0235380 Varpa_3140
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0191087 Vapar_4645
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0235258 Varpa_5250
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0901617 RT97_14875/Vapa/Vapar_4104/VAPA_1c42590/Varpa_4771
MA M90 unassigned family M90 unassigned peptidases MER0904782 RT97_17715
MA M90 unassigned family M90 unassigned peptidases MER0904671 mtfA
MA M90 unassigned family M90 unassigned peptidases MER0286884 Vapar_3095
MA M90 unassigned family M90 unassigned peptidases MER0286922 Varpa_3510
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0836076 RT97_24515
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0235401 Varpa_3896
MD M15 unassigned subfamily M15C unassigned peptidases MER0235267 Varpa_5545
ME M16 M16.019 YMXG peptidase MER0391135 Vapar_4373
ME M16 M16.019 YMXG peptidase MER0391216 Varpa_5026
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0920103 RT97_31525/Varpa_5025
ME M16 unassigned subfamily M16B unassigned peptidases MER0508267
MF M17 M17.003 PepA aminopeptidase MER0289661 pepA Vapar_2730
MF M17 unassigned family M17 unassigned peptidases MER0235370 pepA Varpa_2829
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER1241236 map2
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0318952 map Vapar_5754
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0235384 map Varpa_3202
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0319000 map Varpa_4894
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0510741
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0396841 Vapar_6059
MG M24 unassigned subfamily M24A unassigned peptidases MER1241162
MG M24 unassigned subfamily M24A unassigned peptidases MER1240860
MG M24 unassigned subfamily M24A unassigned peptidases MER1241651
MG M24 unassigned subfamily M24B unassigned peptidases MER1243841
MG M24 unassigned subfamily M24B unassigned peptidases MER1243750
MG M24 unassigned subfamily M24B unassigned peptidases MER0189961 Vapar_5262
MG M24 unassigned subfamily M24B unassigned peptidases MER0235282 Varpa_5977
MH M20 M20.001 glutamate carboxypeptidase MER0127140 Vapar_4731
MH M20 M20.001 glutamate carboxypeptidase MER0302625 Vapar_4731
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0508245
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0474765 Vapar_3929
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0474954 Vapar_5606
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0510739
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0508225
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0508261
MH M20 unassigned subfamily M20A unassigned peptidases MER1218997 cpg23
MH M20 unassigned subfamily M20A unassigned peptidases MER1205809
MH M20 unassigned subfamily M20A unassigned peptidases MER1205941
MH M20 unassigned subfamily M20A unassigned peptidases MER1217916
MH M20 unassigned subfamily M20A unassigned peptidases MER1218125
MH M20 unassigned subfamily M20A unassigned peptidases MER1205812
MH M20 unassigned subfamily M20A unassigned peptidases MER1206779
MH M20 unassigned subfamily M20A unassigned peptidases MER1205618
MH M20 unassigned subfamily M20A unassigned peptidases MER1218082
MH M20 unassigned subfamily M20A unassigned peptidases MER1207612
MH M20 unassigned subfamily M20A unassigned peptidases MER1205966
MH M20 unassigned subfamily M20A unassigned peptidases MER1217966
MH M20 unassigned subfamily M20A unassigned peptidases MER0302627 Vapar_1543
MH M20 unassigned subfamily M20A unassigned peptidases MER0472287 Vapar_1560
MH M20 unassigned subfamily M20A unassigned peptidases MER0473917 Vapar_3755
MH M20 unassigned subfamily M20A unassigned peptidases MER0235323 Varpa_1683
MH M20 unassigned subfamily M20A unassigned peptidases MER0235324 Varpa_1715
MH M20 unassigned subfamily M20A unassigned peptidases MER0235368 dapE Varpa_2812
MH M20 unassigned subfamily M20A unassigned peptidases MER0235381 Varpa_3185
MH M20 unassigned subfamily M20A unassigned peptidases MER0302657 Varpa_4614
MH M20 unassigned subfamily M20A unassigned peptidases MER0508236
MH M20 unassigned family M20D unassigned peptidases MER0189423 Varpa_1173
MH M20 unassigned family M20D unassigned peptidases MER0189424 Vapar_5224
MH M20 unassigned family M20D unassigned peptidases MER0189422 Vapar_0333
MH M20 unassigned family M20D unassigned peptidases MER0189425 Vapar_5885
MH M20 unassigned family M20D unassigned peptidases MER0235292 Varpa_0257
MH M20 unassigned family M20D unassigned peptidases MER0372723 Varpa_4747
MH M20 unassigned family M20D unassigned peptidases MER0508215
MH M20 unassigned family M20D unassigned peptidases MER0508220
MH M20 unassigned family M20D unassigned peptidases MER0508229
MH M20 unassigned family M20 unassigned peptidases MER0853802 RT97_13495
MH M20 unassigned family M20 unassigned peptidases MER0797239 RT97_13500
MH M20 unassigned family M20 unassigned peptidases MER0854283 RT97_09435
MH M20 unassigned family M20 unassigned peptidases MER0229703 Vapar_5278
MH M20 unassigned family M20 unassigned peptidases MER0807663 RT97_21080/Varpa_4468
MH M20 unassigned family M20 unassigned peptidases MER0472306 Vapar_0331
MH M20 unassigned family M20 unassigned peptidases MER0235331 Vapar_1781
MH M20 unassigned family M20 unassigned peptidases MER0235294 Varpa_0331
MH M20 unassigned family M20 unassigned peptidases MER0235325 Varpa_1750
MH M20 unassigned family M20 unassigned peptidases MER0235338 Varpa_2127
MH M20 unassigned family M20 unassigned peptidases MER0235353 Varpa_2404
MH M20 unassigned family M20 unassigned peptidases MER0235283 Varpa_5999
MH M20 unassigned family M20 unassigned peptidases MER0235285 Varpa_6003
MH M20 unassigned family M20 unassigned peptidases MER0508226
MH M20 unassigned family M20 unassigned peptidases MER0508272
MH M28 unassigned subfamily M28E unassigned peptidases MER0235278 Varpa_5847
MJ M38 M38.982 urease MER0861312 ureC
MJ M38 M38.982 urease MER0508263
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870151 RT97_08755
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864284 Vapar_1551
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866332 Vapar_0124
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869059 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860409 Vapar_0175
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867858 Vapar_5601
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867633 Vapar_5470
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865323 Varpa_0956
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866933 RT97_29740/Varpa_1698
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874622 RT97_01055/VAPA_1c02110/Varp/Varpa_0204
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869089 VAPA_1c01340
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869877 VAPA_1c16460
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864055 VAPA_2c10610
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0235307 Varpa_1145
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0235256 Varpa_5217
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0508211
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0508228
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0508260
MJ M38 unassigned family M38 unassigned peptidases MER0864059 RT97_19230
MJ M38 unassigned family M38 unassigned peptidases MER0235289 hutI Varpa_0190
MJ M38 unassigned family M38 unassigned peptidases MER0508210
MM M50 non-peptidase homologue subfamily M50A non-peptidase homologues MER0890119 RT97_25890
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0895070 RT97_20205
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0894142 Vapar_4024
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0897445 Varpa_4662
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0897003 VAPA_1c41710
MM M50 unassigned subfamily M50B unassigned peptidases MER0235388 Varpa_3320
MM M50 unassigned subfamily M50B unassigned peptidases MER0508249
MN M55 unassigned family M55 unassigned peptidases MER0899269 RT97_15375
MN M55 unassigned family M55 unassigned peptidases MER0899238 Q644_01965
MN M55 unassigned family M55 unassigned peptidases MER0190986 Vapar_3007
MN M55 unassigned family M55 unassigned peptidases MER0235364 Varpa_2619
MN M55 unassigned family M55 unassigned peptidases MER0508233
MO M23 M23.009 Mername-AA292 peptidase MER0189664 Vapar_4673
MO M23 M23.009 Mername-AA292 peptidase MER0235260 Varpa_5301
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478607 Vapar_1799
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478515 Vapar_2015
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0235336 Varpa_2050
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0235363 Varpa_2598
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0235400 Varpa_3876
MO M23 unassigned subfamily M23B unassigned peptidases MER0189663 Vapar_3617
MO M23 unassigned subfamily M23B unassigned peptidases MER0387791 Varpa_4165
MT M81 unassigned family M81 unassigned peptidases MER0223199 Vapar_1557
MT M81 unassigned family M81 unassigned peptidases MER0223201 Vapar_6004
MT M81 unassigned family M81 unassigned peptidases MER0223200 Varpa_1752
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0235305 Varpa_0999
MU M103 M103.UNW family M103 non-peptidase homologues MER0280440 Vapar_3552
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405684 Vapar_4140
NB N6 non-peptidase homologue family N6 non-lyase homologues MER0405870 Varpa_4970
NB N6 unassigned family N6 unassigned peptide lyases MER0405789 Vapar_2261
PA S1 S01.274 DegQ peptidase MER0407239 Vapar_1398
PA S1 S01.453 MucD peptidase MER0406301 Vapar_2386
PA S1 S01.477 AlgW peptidase MER0235311 Varpa_1271
PA S1 non-peptidase homologue subfamily S1B non-peptidase homologues MER0235264 Varpa_5452
PA S1 unassigned subfamily S1B unassigned peptidases MER0963221 RT97_24500
PA S1 unassigned subfamily S1B unassigned peptidases MER0961532 RT97_07220
PA S1 unassigned subfamily S1C unassigned peptidases MER0209106 Vapar_1244
PA S1 unassigned subfamily S1C unassigned peptidases MER1273031
PA S1 unassigned subfamily S1C unassigned peptidases MER0235318 Varpa_1539
PA S1 unassigned subfamily S1C unassigned peptidases MER0235361 Varpa_2570
PA S1 unassigned subfamily S1C unassigned peptidases MER0235257 Varpa_5237
PA S1 unassigned subfamily S1C unassigned peptidases MER0510743
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0455549 Varpa_4353
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0235310 Varpa_1238
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0235306 glmS Varpa_1068
PB C45 unassigned family C45 unassigned peptidases MER0185813 Vapar_5952
PB S45 S45.003 cephalosporin C acylase precursor MER1064305 Varpa_4314
PB S45 S45.003 cephalosporin C acylase precursor MER0312077 Vapar_3478
PB S45 S45.003 cephalosporin C acylase precursor MER0312089 Varpa_3993
PB S45 S45.004 acyl-homoserine lactone acylase MER1063429 RT97_21210
PB S45 S45.004 acyl-homoserine lactone acylase MER0236702 Vapar_3883
PB S45 S45.004 acyl-homoserine lactone acylase MER1064214 Varpa_4490
PB S45 S45.005 aculeacin A acylase MER0235354 Varpa_2408
PB S45 non-peptidase homologue family S45 non-peptidase homologues MER1063545 RT97_22460
PB T1 T01.007 CodW component of CodWX peptidase MER0235304 hslV Varpa_0968
PB T1 unassigned subfamily T1A unassigned peptidases MER1105293
PB T1 unassigned subfamily T1B unassigned peptidases MER0235397 Varpa_3728
PB T2 unassigned family T2 unassigned peptidases MER0235366 Varpa_2625
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER1099353 RT97_22645
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0379109 Vapar_1640
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0379088 Vapar_1782
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0235326 Varpa_1789
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0235332 Varpa_1957
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0508256
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0235314 Varpa_1349
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0508218
PB T3 unassigned family T3 unassigned peptidases MER1100003 RT97_23330
PB T3 unassigned family T3 unassigned peptidases MER1097457 RT97_09430
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0235297 Varpa_0630
PC C26 C26.957 GMP synthase MER0235371 guaA Varpa_2866
PC C26 C26.964 CTP synthetase MER0449425 pyrG Varpa_2170
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439213 Vapar_5806
PC C26 unassigned family C26 unassigned peptidases MER0446234 hisH Vapar_1169
PC C26 unassigned family C26 unassigned peptidases MER0449000 Vapar_5208
PC C26 unassigned family C26 unassigned peptidases MER0445216 hisH Varpa_1257
PC C26 unassigned family C26 unassigned peptidases MER0235355 Varpa_2411
PC C26 unassigned family C26 unassigned peptidases MER0235387 carA Varpa_3311
PC C26 unassigned family C26 unassigned peptidases MER0235280 Varpa_5932
PC C56 C56.001 PfpI peptidase MER0186110 Vapar_5013
PC C56 C56.001 PfpI peptidase MER0186111 Vapar_6331
PC C56 C56.001 PfpI peptidase MER0235270 Varpa_5725
PC C56 C56.001 PfpI peptidase MER0510855
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0235383 purL Varpa_3201
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0734161 RT97_15090
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0898030 RT97_04180
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385942 Varpa_3857
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0164253
PE P1 P01.002 BapA peptidase (Sphingosinicella xenopeptidilytica) MER0316822 Vapar_6011
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0508257
PE P1 unassigned family P01 unassigned peptidases MER0235365 Varpa_2620
PE P1 unassigned family P01 unassigned peptidases MER0508234
PE T5 T05.001 ornithine acetyltransferase precursor MER0380455 argJ Varpa_4843
SB S8 S08.162 EprS g.p. (Pseudomonas aeruginosa) MER0235271 Varpa_5784
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0510740
SC S9 S09.945 hypothetical esterase/lipase/thioesterase MER0235379 Varpa_3108
SC S9 S09.980 cholinesterase MER0235337 Varpa_2118
SC S9 S09.980 cholinesterase MER0508235
SC S9 S09.990 esterase D MER0235329 Varpa_1872
SC S9 S09.990 esterase D MER0508227
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0235252 Varpa_5110
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0508268
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0508237
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0996916 Vapar_2005/VAPA_1c21320
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214139 Vapar_2417
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212745 Vapar_3187
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0235302 Varpa_0865
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0235322 Varpa_1674
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0235372 Varpa_2886
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0510754
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0508224
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0508248
SC S9 unassigned subfamily S9A unassigned peptidases MER0994449 RT97_12630
SC S9 unassigned subfamily S9A unassigned peptidases MER1289134
SC S9 unassigned subfamily S9A unassigned peptidases MER1291902
SC S9 unassigned subfamily S9A unassigned peptidases MER1292379
SC S9 unassigned subfamily S9A unassigned peptidases MER0235266 Varpa_5466
SC S9 unassigned subfamily S9A unassigned peptidases MER0164206 Vapar_4802
SC S9 unassigned subfamily S9C unassigned peptidases MER0235403 Varpa_3977
SC S9 unassigned family S9 unassigned peptidases MER0216166 Vapar_2168
SC S9 unassigned family S9 unassigned peptidases MER0214138 Vapar_2417
SC S9 unassigned family S9 unassigned peptidases MER0210438 Vapar_3304
SC S9 unassigned family S9 unassigned peptidases MER0209492 Vapar_3977
SC S9 unassigned family S9 unassigned peptidases MER0235286 Varpa_0069
SC S9 unassigned family S9 unassigned peptidases MER0235352 Varpa_2307
SC S9 unassigned family S9 unassigned peptidases MER0235358 Varpa_2454
SC S9 unassigned family S9 unassigned peptidases MER0235377 Varpa_3001
SC S9 unassigned family S9 unassigned peptidases MER0235382 Varpa_3194
SC S9 unassigned family S9 unassigned peptidases MER0235268 Varpa_5601
SC S9 unassigned family S9 unassigned peptidases MER0235269 Varpa_5622
SC S9 unassigned family S9 unassigned peptidases MER0235277 Varpa_5818
SC S9 unassigned family S9 unassigned peptidases MER0510742
SC S9 unassigned family S9 unassigned peptidases MER0508238
SC S9 unassigned family S9 unassigned peptidases MER0508253
SC S9 unassigned family S9 unassigned peptidases MER0510854
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1014699 RT97_21875
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020438 RT97_05660
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020750 Vapar_5527
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1019582 Vapar_6346
SC S15 unassigned family S15 unassigned peptidases MER0510750
SC S33 S33.001 prolyl aminopeptidase MER0231261 Vapar_3058
SC S33 S33.001 prolyl aminopeptidase MER0235300 Varpa_0713
SC S33 S33.992 chloroperoxidase 1 (Streptomyces lividans-type) MER0235284 Varpa_6002
SC S33 S33.992 chloroperoxidase 1 (Streptomyces lividans-type) MER0510859
SC S33 S33.A54 YnbC protein (Escherichia coli) MER0235259 Varpa_5286
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209031 Vapar_1129
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208923 Vapar_1702
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210721 Vapar_1787
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211608 Vapar_3591
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210748 Vapar_5445
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208818 Vapar_5899
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208825 Vapar_6152
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213575 Vapar_6201
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214143 Vapar_6254
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235299 Varpa_0702
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235309 Varpa_1215
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235321 Varpa_1643
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235330 Varpa_1873
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235333 Varpa_1962
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235351 Varpa_2304
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235373 Varpa_2925
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235374 Varpa_2946
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0235378 Varpa_3094
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0510748
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0508212
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0508222
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0508244
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0508251
SC S33 unassigned family S33 unassigned peptidases MER1343521
SC S33 unassigned family S33 unassigned peptidases MER1339686
SC S33 unassigned family S33 unassigned peptidases MER1343631
SC S33 unassigned family S33 unassigned peptidases MER1340356
SC S33 unassigned family S33 unassigned peptidases MER0209982 Vapar_0815
SC S33 unassigned family S33 unassigned peptidases MER0213373 Vapar_3218
SC S33 unassigned family S33 unassigned peptidases MER0210981 Vapar_4284
SC S33 unassigned family S33 unassigned peptidases MER0211230 metX Vapar_5288
SC S33 unassigned family S33 unassigned peptidases MER0209819 Vapar_5405
SC S33 unassigned family S33 unassigned peptidases MER0209703 Vapar_6025
SC S33 unassigned family S33 unassigned peptidases MER0209497 Vapar_6162
SC S33 unassigned family S33 unassigned peptidases MER0235287 Varpa_0101
SC S33 unassigned family S33 unassigned peptidases MER0235301 Varpa_0840
SC S33 unassigned family S33 unassigned peptidases MER0235317 Varpa_1404
SC S33 unassigned family S33 unassigned peptidases MER0235327 Varpa_1825
SC S33 unassigned family S33 unassigned peptidases MER0235335 Varpa_2005
SC S33 unassigned family S33 unassigned peptidases MER0235350 Varpa_2298
SC S33 unassigned family S33 unassigned peptidases MER0235357 Varpa_2437
SC S33 unassigned family S33 unassigned peptidases MER0235359 Varpa_2462
SC S33 unassigned family S33 unassigned peptidases MER0235362 Varpa_2583
SC S33 unassigned family S33 unassigned peptidases MER0235389 Varpa_3337
SC S33 unassigned family S33 unassigned peptidases MER0235393 Varpa_3438
SC S33 unassigned family S33 unassigned peptidases MER0235396 Varpa_3593
SC S33 unassigned family S33 unassigned peptidases MER0235399 Varpa_3775
SC S33 unassigned family S33 unassigned peptidases MER0235261 Varpa_5315
SC S33 unassigned family S33 unassigned peptidases MER0510749
SC S33 unassigned family S33 unassigned peptidases MER0510752
SC S33 unassigned family S33 unassigned peptidases MER0510753
SC S33 unassigned family S33 unassigned peptidases MER0510755
SC S33 unassigned family S33 unassigned peptidases MER0508219
SC S33 unassigned family S33 unassigned peptidases MER0508258
SC S33 unassigned family S33 unassigned peptidases MER0508266
SC S33 unassigned family S33 unassigned peptidases MER0508270
SE S11 S11.002 murein-DD-endopeptidase MER0192816 Vapar_2375
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0235356 Varpa_2415
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0508252
SE S11 unassigned family S11 unassigned peptidases MER0951006 RT97_16905
SE S11 unassigned family S11 unassigned peptidases MER0983877 RT97_13450
SE S11 unassigned family S11 unassigned peptidases MER0984881 Vapar_3231
SE S11 unassigned family S11 unassigned peptidases MER0192817 Vapar_4921
SE S12 S12.950 esterase EstB MER0235360 Varpa_2520
SE S12 S12.A11 lact-2 g.p. (Caenorhabditis elegans) MER0510745
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421928 Vapar_4279
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421930 Vapar_5746
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421931 Vapar_5884
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0508269
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0508271
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1011764 RT97_12820
SE S12 unassigned family S12 unassigned peptidases MER1005887 RT97_20985
SE S12 unassigned family S12 unassigned peptidases MER1009981 RT97_12825
SE S12 unassigned family S12 unassigned peptidases MER1011013 RT97_12980
SE S12 unassigned family S12 unassigned peptidases MER1006926 RT97_26215
SE S12 unassigned family S12 unassigned peptidases MER1004886 RT97_24745
SE S12 unassigned family S12 unassigned peptidases MER1012160 RT97_24235
SE S12 unassigned family S12 unassigned peptidases MER1027743 RT97_06535
SE S12 unassigned family S12 unassigned peptidases MER0192925 Vapar_2539
SE S12 unassigned family S12 unassigned peptidases MER0192926 Vapar_3476
SE S12 unassigned family S12 unassigned peptidases MER0421927 Vapar_3990
SE S12 unassigned family S12 unassigned peptidases MER0421929 Vapar_4946
SE S12 unassigned family S12 unassigned peptidases MER0421932 Vapar_6123
SE S12 unassigned family S12 unassigned peptidases MER0421933 Vapar_6213
SE S12 unassigned family S12 unassigned peptidases MER0235328 Varpa_1843
SE S12 unassigned family S12 unassigned peptidases MER0235376 Varpa_2965
SE S12 unassigned family S12 unassigned peptidases MER0235390 Varpa_3387
SE S12 unassigned family S12 unassigned peptidases MER0355435 Varpa_3990
SE S12 unassigned family S12 unassigned peptidases MER0422051 Varpa_4453
SE S12 unassigned family S12 unassigned peptidases MER0422052 Varpa_4625
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0192939 Vapar_5089
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0235274 Varpa_5807
SE S13 unassigned family S13 unassigned peptidases MER1316140
SE S13 unassigned family S13 unassigned peptidases MER1313939
SE S13 unassigned family S13 unassigned peptidases MER1316050
SF S24 S24.001 repressor LexA MER0235385 lexA Varpa_3291
SF S24 S24.A20 repressor protein phage e14 (Escherichia coli) MER0235367 Varpa_2807
SF S24 S24.A20 repressor protein phage e14 (Escherichia coli) MER0508247
SF S24 unassigned family S24 unassigned peptidases MER1041461 RT97_15960
SF S24 unassigned family S24 unassigned peptidases MER0235334 Varpa_1986
SF S24 unassigned family S24 unassigned peptidases MER0508265
SF S26 S26.001 signal peptidase I MER0235319 Vapar_1400
SF S26 S26.001 signal peptidase I MER0508221
SF S26 S26.014 TraF peptidase MER0269310 Vapar_2090
SJ S16 S16.001 Lon-A peptidase MER0235391 lon Varpa_3420
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0235291 Varpa_0252
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0235290 Varpa_0220
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0508214
SJ S16 unassigned family S16 unassigned peptidases MER1323356
SJ S16 unassigned family S16 unassigned peptidases MER0510744
SK S14 S14.001 peptidase Clp (type 1) MER0235392 clpP Varpa_3422
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0359834 Vapar_2473
SK S14 unassigned family S14 unassigned peptidases MER0235313 Varpa_1293
SK S41 S41.004 C-terminal processing peptidase-3 MER0337708 Varpa_4771
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER1055948 RT97_01180
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER1058956 Vapar_0151
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0235288 Varpa_0176
SK S41 S41.012 Pep putative peptidase (Vibrio-type) MER0508213
SK S49 S49.003 protein C (bacteriophage lambda) MER0508264
SK S49 unassigned subfamily S49B unassigned peptidases MER1067705 Vapar_1382
SK S49 unassigned subfamily S49B unassigned peptidases MER1354781
SK S49 unassigned subfamily S49B unassigned peptidases MER1353507
SK S49 unassigned subfamily S49B unassigned peptidases MER0321477 Varpa_1523
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0235375 Varpa_2947
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0508243
ST S54 unassigned family S54 unassigned peptidases MER1080272 RT97_07445
ST S54 unassigned family S54 unassigned peptidases MER1075465 Vapar_1360
ST S54 unassigned family S54 unassigned peptidases MER1075673 Varpa_1500
ST S54 unassigned family S54 unassigned peptidases MER1082558 VAPA_1c14520
U- U69 unassigned family U69 unassigned peptidases MER0235339 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235340 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235341 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235342 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235344 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235345 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235346 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235348 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235349 Varpa_2291
U- U69 unassigned family U69 unassigned peptidases MER0235253 Varpa_5119
U- U69 unassigned family U69 unassigned peptidases MER0508241
U- U69 unassigned family U69 unassigned peptidases MER0508242
U- U69 unassigned family U69 unassigned peptidases MER0508259

GENOME ANALYSIS: Comparison with 31 completely sequenced genomes from family Comamonadaceae
Family Comment
A39 significant presence (24 homologues)
C1 significant presence (1 homologues)
C14 significant presence (2 homologues)
C15 lineage specific expansion (5 homologues)
C39 significant presence (1 homologues)
C51 significant presence (1 homologues)
G4 significant presence (3 homologues)
G5 significant presence (1 homologues)
I104 significant presence (3 homologues)
M4 significant presence (5 homologues)
M20 lineage specific expansion (53 homologues)
M23 lineage specific expansion (9 homologues)
M24 lineage specific expansion (13 homologues)
M26 significant presence (1 homologues)
M28 significant presence (1 homologues)
M38 lineage specific expansion (23 homologues)
M41 lineage specific expansion (5 homologues)
M48 lineage specific expansion (12 homologues)
M55 lineage specific expansion (5 homologues)
M90 lineage specific expansion (4 homologues)
P1 lineage specific expansion (4 homologues)
S9 lineage specific expansion (40 homologues)
S12 lineage specific expansion (27 homologues)
S13 lineage specific expansion (5 homologues)
S33 lineage specific expansion (61 homologues)
S41 lineage specific expansion (5 homologues)
S45 lineage specific expansion (8 homologues)
S54 significant presence (4 homologues)
T3 lineage specific expansion (10 homologues)
U69 significant presence (13 homologues)