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Candidatus Nitrospira defluvii

Taxonomy
Taxonomy database identifier: 330214
Superkingdom Bacteria
Phylum Nitrospirae
Class Nitrospira
Order Nitrospirales
Family Nitrospiraceae
Species defluvii
Peptidase View peptidase sequences from Candidatus Nitrospira defluvii
Count of known and putative peptidases: 85, non-peptidase homologues 32
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0221067 lspA NIDE1078
AD A24 A24.019 ComC peptidase MER0221141 pilD NIDE4102
AD A24 unassigned subfamily A24A unassigned peptidases MER0426966 NIDE2118
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0715238 hlyB
CD C14 C14.048 bacterial metacaspase MER0168209 NIDE1537
CD C14 non-peptidase homologue subfamily C14B non-peptidase homologues MER0221058 NIDE0907
CD C14 non-peptidase homologue subfamily C14B non-peptidase homologues MER0241312 NIDE1644
CD C14 non-peptidase homologue subfamily C14B non-peptidase homologues MER0221125 NIDE3349
CD C14 unassigned subfamily C14B unassigned peptidases MER0221082 NIDE1939
CD C14 unassigned subfamily C14B unassigned peptidases MER0221085 NIDE2010
CL C60 unassigned subfamily C60A unassigned peptidases MER0221060 NIDE0940
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0741043 NIDE0357
G- G5 unassigned family G5 unassigned peptidases MER0938173 NIDE1161
MA M1 unassigned family M1 unassigned peptidases MER0221048 NIDE0352
MA M1 unassigned family M1 unassigned peptidases MER0221140 NIDE4085
MA M3 unassigned family M3 unassigned peptidases MER0221123 NIDE3226
MA M32 unassigned family M32 unassigned peptidases MER0221066 NIDE1041
MA M41 M41.001 FtsH peptidase MER0221102 hflB NIDE2737
MA M41 unassigned family M41 unassigned peptidases MER0221106 ftsH NIDE2929
MA M48 unassigned subfamily M48B unassigned peptidases MER0221073 htpX NIDE1236
MA M48 unassigned subfamily M48C unassigned peptidases MER0221046 NIDE0306
MA M48 unassigned subfamily M48C unassigned peptidases MER0221065 NIDE0993
MA M48 unassigned subfamily M48C unassigned peptidases MER0221069 NIDE1118
MA M48 unassigned subfamily M48C unassigned peptidases MER0221096 NIDE2544
MA M48 unassigned subfamily M48C unassigned peptidases MER0221144 NIDE4192
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0221134 NIDE3730
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0221147 NIDE4282
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0221133 NIDE3730
ME M16 unassigned subfamily M16B unassigned peptidases MER0221132 NIDE3729
ME M16 unassigned subfamily M16B unassigned peptidases MER0221142 NIDE4126
ME M16 unassigned subfamily M16B unassigned peptidases MER0221148 NIDE4283
MF M17 unassigned family M17 unassigned peptidases MER0221040 pepA NIDE0245
MG M24 unassigned subfamily M24A unassigned peptidases MER0221075 map NIDE1333
MG M24 unassigned subfamily M24B unassigned peptidases MER0221093 pepP NIDE2516
MH M20 unassigned subfamily M20F unassigned peptidases MER0221145 NIDE4254
MH M28 unassigned subfamily M28C unassigned peptidases MER0221130 NIDE3566
MH M28 unassigned subfamily M28F unassigned peptidases MER1252362
MH M28 unassigned subfamily M28F unassigned peptidases MER0221122 NIDE3190
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0221070 NIDE1157
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0221094 pyrC NIDE2540
MM M50 unassigned subfamily M50B unassigned peptidases MER0221052 NIDE0600
MM M50 unassigned subfamily M50B unassigned peptidases MER0221146 NIDE4279
MM M50 unassigned family M50 unassigned peptidases MER0890447 NIDE3136
MM M50 unassigned family M50 unassigned peptidases MER0221055 NIDE0721
MM M50 unassigned family M50 unassigned peptidases MER0221077 ecfE NIDE1510
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0221115 NIDE3065
MO M23 unassigned subfamily M23B unassigned peptidases MER0221111 NIDE3053
MO M23 unassigned subfamily M23B unassigned peptidases MER0221131 NIDE3714
MP M67 M67.011 MPN domain-containing protein (Homo sapiens) MER0906258 NIDE1815
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0137008 tldD NIDE1514
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0140488 pmbA NIDE1515
MU M103 M103.UNW family M103 non-peptidase homologues MER0221150 NIDE4367
MU M103 M103.UPW family M103 unassigned peptidases MER0221151 NIDE4368
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0221091 flhB NIDE2305
PA S1 unassigned subfamily S1B unassigned peptidases MER0221059 NIDE0911
PA S1 unassigned subfamily S1C unassigned peptidases MER0216645 NIDE1429
PA S1 unassigned subfamily S1C unassigned peptidases MER0221045 degP NIDE0303
PA S1 unassigned subfamily S1C unassigned peptidases MER0221050 NIDE0442
PA S1 unassigned subfamily S1C unassigned peptidases MER0221054 degP2 NIDE0681
PA S1 unassigned subfamily S1C unassigned peptidases MER0221061 NIDE0954
PA S1 unassigned subfamily S1C unassigned peptidases MER0221068 NIDE1115
PA S1 unassigned subfamily S1C unassigned peptidases MER0221098 degP3 NIDE2561
PA S1 unassigned subfamily S1C unassigned peptidases MER0221107 degQ NIDE2979
PA S1 unassigned subfamily S1C unassigned peptidases MER0221124 degP NIDE3344
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0143922 purF NIDE1393
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458217 gltB NIDE3384
PB C44 C44.976 AsnB protein MER0221108 NIDE2995
PB C44 C44.976 AsnB protein MER0221109 asnB4 NIDE3010
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0221105 glmS NIDE2921
PB C44 unassigned family C44 unassigned peptidases MER0221101 asnB NIDE2699
PB C44 unassigned family C44 unassigned peptidases MER0221104 asnB NIDE2868
PB S45 S45.003 cephalosporin C acylase precursor MER0221087 NIDE2155
PB T1 T01.005 bacterial proteasome, beta component MER0221062 NIDE0958
PB T1 T01.005 bacterial proteasome, beta component MER0221113 psmB NIDE3056
PB T1 T01.006 HslV component of HslUV peptidase MER0221044 hslV NIDE0297
PB T1 T01.980 bacterial proteasome, alpha subunit MER0221063 NIDE0959
PB T1 T01.980 bacterial proteasome, alpha subunit MER0221112 psmA NIDE3055
PB T2 unassigned family T2 unassigned peptidases MER0221149 iaaA NIDE4324
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0221086 trpG NIDE2041
PC C26 C26.957 GMP synthase MER0221076 guaA NIDE1422
PC C26 C26.964 CTP synthetase MER0450346 pyrG NIDE2555
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444387 hisH NIDE0983
PC C26 unassigned family C26 unassigned peptidases MER0221041 NIDE0251
PC C26 unassigned family C26 unassigned peptidases MER0221095 carA NIDE2542
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0168187 purQ NIDE1391
PE P1 unassigned family P01 unassigned peptidases MER0221047 dmpA NIDE0324
PE T5 T05.002 ArgJ protein (archea) MER0221103 argJ NIDE2756
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0221088 NIDE2169
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0221053 NIDE0639
SC S9 unassigned subfamily S9C unassigned peptidases MER0221143 NIDE4187
SC S9 unassigned family S9 unassigned peptidases MER0221071 NIDE1193
SC S9 unassigned family S9 unassigned peptidases MER0221152 NIDE4381
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0221056 NIDE0745
SC S33 unassigned family S33 unassigned peptidases MER0221064 NIDE0965
SC S33 unassigned family S33 unassigned peptidases MER0221072 NIDE1203
SC S33 unassigned family S33 unassigned peptidases MER0221100 NIDE2599
SC S33 unassigned family S33 unassigned peptidases MER0221129 NIDE3554
SE S11 S11.004 K15-type DD-transpeptidase MER0221049 NIDE0434
SE S12 S12.950 esterase EstB MER0221057 NIDE0773
SF S24 S24.001 repressor LexA MER0221089 NIDE2249
SF S24 S24.001 repressor LexA MER0221121 lexA NIDE3144
SF S26 S26.025 signal peptidase sipX MER0221097 lepB NIDE2552
SH S78 unassigned family S78 unassigned peptidases MER0221139 NIDE4002
SJ S16 S16.001 Lon-A peptidase MER0221110 lon NIDE3046
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0221079 radA NIDE1676
SJ S16 S16.A12 PF1438 (Pyrococcus furiosus) MER0168197 NIDE1415
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0221090 yifB NIDE2260
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0221117 NIDE3095
SJ S16 unassigned family S16 unassigned peptidases MER0221081 lon NIDE1890
SJ S16 unassigned family S16 unassigned peptidases MER0221135 NIDE3773
SK S14 S14.001 peptidase Clp (type 1) MER0221043 clpP NIDE0261
SK S41 unassigned subfamily S41A unassigned peptidases MER0221114 ctpA NIDE3064
SK S49 S49.003 protein C (bacteriophage lambda) MER0221039 NIDE0105
SK S49 unassigned subfamily S49B unassigned peptidases MER1355567
SK S49 unassigned subfamily S49B unassigned peptidases MER0301940 NIDE0427
SK S49 unassigned family S49 unassigned peptidases MER0300885 NIDE2543
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0221138 NIDE3962
U- U72 U72.001 Dop isopeptidase MER0402550
U- U72 U72.001 Dop isopeptidase MER0402624
U- U72 U72.001 Dop isopeptidase MER0398145
U- U72 unassigned family U72 unassigned peptidases MER0402834

GENOME ANALYSIS: Comparison with 4322 completely sequenced genomes from superkingdom Bacteria
Family Comment
C14 significant presence (6 homologues)
C60 significant presence (1 homologues)
M67 significant presence (1 homologues)
P1 significant presence (1 homologues)
S45 significant presence (1 homologues)
S78 significant presence (1 homologues)
T2 significant presence (1 homologues)
U72 significant presence (4 homologues)

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