Photorhabdus asymbiotica

Taxonomy
Taxonomy database identifier: 291112
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Photorhabdus
Species asymbiotica
Peptidase View peptidase sequences from Photorhabdus asymbiotica
Count of known and putative peptidases: 93, non-peptidase homologues 35
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1377370
AC A8 A08.001 signal peptidase II MER0238252 lspA PAU_00556
AD A24 A24.003 type 4 prepilin peptidase 2 MER0184770 pppA PAU_02785
AD A24 unassigned subfamily A24A unassigned peptidases MER0161601 PAU_03274
CA C39 C39.005 colicin V processing peptidase MER0238266 mchF PAU_01344
CA C39 unassigned family C39 unassigned peptidases MER0238290 mclB PAU_02324
CA C51 unassigned family C51 unassigned peptidases MER0241468 PAU_02437
CA C58 C58.001 YopT peptidase MER0186228 yopT PAU_02096
CD C80 unassigned family C80 unassigned peptidases MER0161440 PAU_03073
CD C80 unassigned family C80 unassigned peptidases MER0161513 rtxA PAU_03027
CD C80 unassigned family C80 unassigned peptidases MER0161535 PAU_03018
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0238330 pcp PAU_03889
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243843 PAU_03258
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0461421 ycfS PAU_01913
CO C40 C40.004 spr peptidase MER0238271 spr PAU_01672
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0238283 nlpC PAU_01883
G- G5 unassigned family G5 unassigned peptidases MER0238305 PAU_02949
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0238300 pepN PAU_02761
MA M3 M03.004 oligopeptidase A MER0187738 opdA PAU_00108
MA M4 M04.024 PrtS peptidase (Photorhabdus luminescens) MER0187759 PAU_01392
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER1208724
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER0188082 PAU_00605
MA M32 unassigned family M32 unassigned peptidases MER0161424 PAU_00753
MA M41 M41.001 FtsH peptidase MER0161338 mrsC PAU_04035
MA M48 M48.002 HtpX peptidase MER0238282 htpX PAU_01855
MA M48 M48.023 BepA (Escherichia coli) MER0238275 PAU_01791
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0238276 PAU_01816
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0238301 PAU_02768
MD M15 unassigned subfamily M15C unassigned peptidases MER0168458 PAU_03355
ME M16 M16.001 pitrilysin MER0238254 ptrA PAU_00590
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0238248 PAU_00237
MF M17 M17.003 PepA aminopeptidase MER0238334 pepA PAU_03985
MF M17 M17.004 PepB aminopeptidase MER0238267 pepB PAU_01369
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0236855 map PAU_03691
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0238256 map PAU_00643
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0238328 pepQ PAU_03872
MG M24 M24.004 aminopeptidase P (bacteria) MER0161329 pepP PAU_01156
MH M20 M20.003 peptidase T MER0238273 pepT PAU_01730
MH M20 M20.007 Xaa-His dipeptidase MER0189279 PAU_03221
MH M20 M20.010 DapE peptidase MER0238277 dapE PAU_01817
MH M20 M20.974 acetylornithine deacetylase ArgE MER0238338 argE PAU_04238
MH M20 unassigned subfamily M20C unassigned peptidases MER0736633
MH M28 unassigned family M28 unassigned peptidases MER0161350 PAU_00421
MJ M38 M38.982 urease MER0238293 ureC PAU_02379
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0238268 hutI PAU_01420
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0238307 nagA PAU_03090
MM M50 M50.004 RseP peptidase MER0238257 rseP PAU_00651
MO M23 M23.011 YebA peptidase MER0189678 PAU_02465
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0238340 PAU_04349
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0238258 nlpD PAU_00691
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0238326 tldD PAU_03696
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0238325 pmbA PAU_03692
NB N6 N06.001 YscU protein MER0238260 sctU PAU_01045
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0238297 flhB PAU_02666
NB N6 unassigned family N6 unassigned peptide lyases MER0238313 PAU_03449
PA S1 S01.274 DegQ peptidase MER0238323 degQ PAU_03656
PA S1 unassigned subfamily S1A unassigned peptidases MER0217450 PAU_01598
PA S1 unassigned subfamily S1C unassigned peptidases MER0238324 degS PAU_03658
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0238269 purF PAU_01457
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0238322 gltB PAU_03647
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0238241 glmS PAU_00033
PB C44 unassigned family C44 unassigned peptidases MER0238310 PAU_03259
PB C44 unassigned family C44 unassigned peptidases MER0238339 wbfR PAU_04336
PB T1 T01.006 HslV component of HslUV peptidase MER0167089 hslV PAU_04250
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0238315 PAU_03499
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0238249 pabA PAU_00304
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0238285 trpG PAU_02054
PC C26 C26.962 glutamine amidotransferase MER0238278 guaA PAU_01827
PC C26 C26.964 CTP synthetase MER0448975 pyrG PAU_00840
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0238304 hisH PAU_02877
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0238262 PAU_01184
PC C26 unassigned family C26 unassigned peptidases MER0238253 carA PAU_00561
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0238265 purL PAU_01324
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0238321 elbB PAU_03643
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0161318 darR PAU_01232
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0167063 PAU_01231
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0167138 PAU_03080
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0186129 PAU_03435
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0238288 PAU_02203
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0238287 PAU_02144
SB S8 unassigned subfamily S8A unassigned peptidases MER0238272 PAU_01718
SC S9 S09.010 oligopeptidase B MER0192494 ptrB PAU_01823
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0238331 PAU_03906
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0161442 PAU_03073
SC S9 unassigned family S9 unassigned peptidases MER0214555 luxD PAU_02513
SC S33 S33.001 prolyl aminopeptidase MER0238279 pip PAU_01844
SC S33 S33.010 SCO7095-type peptidase MER0238335 pldB PAU_04110
SC S33 S33.A02 At5g38520 (Arabidopsis thaliana) MER0238309 pcaD PAU_03200
SC S33 S33.A46 YheT protein (Escherichia coli) MER0238250 yheT PAU_00310
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0238261 PAU_01068
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0238306 PAU_03011
SC S33 unassigned family S33 unassigned peptidases MER0238247 bioH PAU_00148
SC S33 unassigned family S33 unassigned peptidases MER0214536 PAU_00422
SC S33 unassigned family S33 unassigned peptidases MER0238270 mhpC3 PAU_01539
SC S33 unassigned family S33 unassigned peptidases MER0211581 PAU_02072
SC S33 unassigned family S33 unassigned peptidases MER0213238 irp4 PAU_02305
SC S33 unassigned family S33 unassigned peptidases MER0238292 PAU_02359
SC S33 unassigned family S33 unassigned peptidases MER0213205 scoT PAU_02456
SE S11 S11.003 penicillin-binding protein 6 MER0238303 dacC PAU_02870
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0238289 blaA PAU_02294
SE S11 unassigned family S11 unassigned peptidases MER0238308 dacA PAU_03165
SE S12 S12.006 class C beta-lactamase MER0238259 ampC PAU_00771
SE S12 S12.012 AmpH protein (Escherichia-type) MER0238333 ampH PAU_03982
SE S12 unassigned family S12 unassigned peptidases MER0238242 PAU_00115
SE S12 unassigned family S12 unassigned peptidases MER0238243 PAU_00116
SE S12 unassigned family S12 unassigned peptidases MER0238244 PAU_00117
SE S12 unassigned family S12 unassigned peptidases MER0238245 PAU_00118
SE S12 unassigned family S12 unassigned peptidases MER0238314 PAU_03479
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0167076 dacB PAU_04040
SE S13 unassigned family S13 unassigned peptidases MER1313761
SF S24 S24.001 repressor LexA MER0238332 lexA PAU_03927
SF S24 unassigned family S24 unassigned peptidases MER0238320 PAU_03571
SF S26 S26.001 signal peptidase I MER0238264 lepB PAU_01304
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0150916 PAU_04294
SJ S16 S16.001 Lon-A peptidase MER0238311 PAU_03415
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0238251 radA PAU_00521
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0238299 PAU_02746
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0238336 yifB PAU_04166
SK S14 S14.001 peptidase Clp (type 1) MER0238312 clpP PAU_03417
SK S41 S41.001 C-terminal processing peptidase-1 MER0238280 prc PAU_01854
SK S41 S41.001 C-terminal processing peptidase-1 MER0238281 prc PAU_01854
SK S49 unassigned subfamily S49B unassigned peptidases MER0297915 sppA PAU_01979
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0238246 glpG PAU_00135
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0238327 PAU_03845
ST S54 unassigned family S54 unassigned peptidases MER0238263 PAU_01287
U- U32 U32.002 collagenase (Helicobacter-type) MER0238274 yegQ PAU_01762

GENOME ANALYSIS: Comparison with 111 completely sequenced genomes from family Enterobacteriaceae
Family Comment