Desulfobacterium autotrophicum

Taxonomy
Taxonomy database identifier: 2296
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfobacterales
Family Desulfobacteraceae
Genus Desulfobacterium
Species autotrophicum
Peptidase View peptidase sequences from Desulfobacterium autotrophicum
Count of known and putative peptidases: 102, non-peptidase homologues 44
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0158184 lspA HRM2_24900
AD A24 A24.019 ComC peptidase MER0158207 pilD HRM2_30410
AE A31 unassigned family A31 unassigned peptidases MER0158136 hyaD1 HRM2_11670
AE A31 unassigned family A31 unassigned peptidases MER0158137 hyaD2 HRM2_11700
AE A31 unassigned family A31 unassigned peptidases MER0158172 hynC HRM2_22370
CA C1 unassigned subfamily C1A unassigned peptidases MER0158131 HRM2_10590
CA C39 unassigned family C39 unassigned peptidases MER0158186 HRM2_25970
CD C14 unassigned subfamily C14B unassigned peptidases MER0158118 HRM2_07550
CL C82 unassigned subfamily C82A unassigned peptidases MER0158208 HRM2_30500
CO C40 unassigned family C40 unassigned peptidases MER0158244 HRM2_46140
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0158179 pepN HRM2_24510
MA M6 unassigned family M6 unassigned peptidases MER0158113 HRM2_05730
MA M41 M41.001 FtsH peptidase MER0158111 ftsH HRM2_05060
MA M48 unassigned subfamily M48A unassigned peptidases MER0158144 HRM2_15460
MA M48 unassigned subfamily M48B unassigned peptidases MER0158103 HRM2_01450
MA M48 unassigned subfamily M48B unassigned peptidases MER0158171 htpX HRM2_22250
MA M48 unassigned subfamily M48C unassigned peptidases MER0158202 HRM2_28790
MA M48 unassigned family M48 unassigned peptidases MER0158154 HRM2_17790
MA M48 unassigned family M48 unassigned peptidases MER0158211 HRM2_31860
MA M54 unassigned family M54 unassigned peptidases MER0158247 HRM2_46840
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0158185 HRM2_25970
MC M86 unassigned family M86 unassigned peptidases MER0280435 HRM2_06090
MC M86 unassigned family M86 unassigned peptidases MER0280787 HRM2_17200
MC M86 unassigned family M86 unassigned peptidases MER0327923 HRM2_17210
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0158163 HRM2_21410
ME M16 unassigned subfamily M16B unassigned peptidases MER0158156 HRM2_18720
ME M16 unassigned subfamily M16C unassigned peptidases MER0158106 HRM2_02630
MF M17 unassigned family M17 unassigned peptidases MER0158231 pepA HRM2_40450
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0158249 HRM2_47080
MG M24 unassigned subfamily M24A unassigned peptidases MER0158166 map HRM2_21720
MG M24 unassigned subfamily M24B unassigned peptidases MER0158128 pepP HRM2_10060
MG M24 unassigned subfamily M24B unassigned peptidases MER0158216 pepQ HRM2_33210
MH M18 unassigned family M18 unassigned peptidases MER0158203 HRM2_30320
MH M18 unassigned family M18 unassigned peptidases MER0158210 HRM2_31620
MH M20 unassigned subfamily M20A unassigned peptidases MER0158254 argE HRM2_48770
MH M20 unassigned subfamily M20B unassigned peptidases MER0158193 pepT HRM2_27370
MH M20 unassigned family M20D unassigned peptidases MER0158140 HRM2_12950
MH M20 unassigned family M20 unassigned peptidases MER0158138 HRM2_12150
MH M20 unassigned family M20 unassigned peptidases MER0158139 HRM2_12890
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0158180 adeC HRM2_24620
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0158214 HRM2_33140
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0158255 HRM2_48780
MJ M38 unassigned family M38 unassigned peptidases MER0158164 iadA HRM2_21530
MJ M38 unassigned family M38 unassigned peptidases MER0158195 pyrC HRM2_27770
MJ M38 unassigned family M38 unassigned peptidases MER0158198 guaD HRM2_28460
MJ M38 unassigned family M38 unassigned peptidases MER0158234 hutI HRM2_43170
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0158201 HRM2_28750
MM M50 unassigned subfamily M50B unassigned peptidases MER0158148 HRM2_17170 HRM2_17170
MN M55 unassigned family M55 unassigned peptidases MER0158160 dppA1 HRM2_20040
MO M23 M23.009 Mername-AA292 peptidase MER0158162 HRM2_21230
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0158133 HRM2_11480
MO M23 unassigned subfamily M23B unassigned peptidases MER0158191 HRM2_26640
MO M23 unassigned subfamily M23B unassigned peptidases MER0158197 HRM2_27810
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327096
PA S1 unassigned subfamily S1C unassigned peptidases MER0158155 degP HRM2_18690
PA S1 unassigned subfamily S1C unassigned peptidases MER0158243 HRM2_45770
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0158174 asnB HRM2_22820
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0158250 purF HRM2_47750
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0158213 gltB2 HRM2_32360
PB C44 unassigned family C44 unassigned peptidases MER0158252 HRM2_47800
PB S45 S45.001 penicillin G acylase precursor MER0158187 HRM2_26080
PB S45 S45.003 cephalosporin C acylase precursor MER0158130 HRM2_10410
PB T1 unassigned subfamily T1B unassigned peptidases MER0158194 hslV HRM2_27600
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0158152 trpG HRM2_17700
PC C26 C26.957 GMP synthase MER0158159 guaA1 HRM2_18870
PC C26 C26.959 TRP3 protein MER0158121 pabA HRM2_08100
PC C26 C26.964 CTP synthetase MER0158192 pyrG HRM2_26840
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0158226 hisH2 HRM2_36790
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0158105 cobQ HRM2_02240
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0158251 carA HRM2_47770
PC C26 unassigned family C26 unassigned peptidases MER0158165 HRM2_21580
PC C26 unassigned family C26 unassigned peptidases MER0158218 guaA2 HRM2_34580
PC C26 unassigned family C26 unassigned peptidases MER0158224 hisH1 HRM2_35740
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0158149 purQ HRM2_17190
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0158119 thiJ HRM2_07610
PE T5 T05.002 ArgJ protein (archea) MER0158170 argJ HRM2_22190
SB S8 unassigned subfamily S8A unassigned peptidases MER0158178 HRM2_24400
SB S8 unassigned subfamily S8A unassigned peptidases MER0158188 HRM2_26300
SB S8 unassigned subfamily S8A unassigned peptidases MER0158189 HRM2_26400
SB S8 unassigned subfamily S8A unassigned peptidases MER0158242 HRM2_45530
SC S9 S09.951 brefeldin A esterase MER0158219 HRM2_34910
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0158241 HRM2_45330
SC S9 unassigned subfamily S9A unassigned peptidases MER0158256 HRM2_48810 HRM2_48810
SC S9 unassigned subfamily S9C unassigned peptidases MER0158123 HRM2_08930
SC S9 unassigned subfamily S9C unassigned peptidases MER0158124 HRM2_08980
SC S9 unassigned family S9 unassigned peptidases MER0158143 HRM2_14820
SC S9 unassigned family S9 unassigned peptidases MER0158183 estA HRM2_24850
SC S9 unassigned family S9 unassigned peptidases MER0158190 HRM2_26610
SC S9 unassigned family S9 unassigned peptidases MER0158240 HRM2_44900
SC S9 unassigned family S9 unassigned peptidases MER1026595 HRM2_45140
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0158176 dhaA HRM2_23490
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0158233 phaC HRM2_42100
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213099 HRM2_04720
SC S33 unassigned family S33 unassigned peptidases MER0158114 HRM2_05990
SC S33 unassigned family S33 unassigned peptidases MER0158116 HRM2_06220
SC S33 unassigned family S33 unassigned peptidases MER0158117 pldB HRM2_06410
SC S33 unassigned family S33 unassigned peptidases MER0158151 HRM2_17650
SC S33 unassigned family S33 unassigned peptidases MER0158212 HRM2_32210
SC S33 unassigned family S33 unassigned peptidases MER0158236 HRM2_43400
SC S33 unassigned family S33 unassigned peptidases MER0158246 metX HRM2_46520
SC S33 unassigned family S33 unassigned peptidases MER0158253 HRM2_47920
SE S12 S12.950 esterase EstB MER0158221 HRM2_35280
SE S12 unassigned family S12 unassigned peptidases MER0158237 HRM2_43580
SE S13 unassigned family S13 unassigned peptidases MER0158204 dacB HRM2_30330
SF S24 S24.003 UmuD protein MER0158107 umuD2 HRM2_40890
SF S24 unassigned family S24 unassigned peptidases MER0158167 HRM2_21870
SF S26 S26.025 signal peptidase sipX MER0158196 lepB HRM2_27790
SF S26 unassigned subfamily S26A unassigned peptidases MER1336594
SJ S16 S16.001 Lon-A peptidase MER0158110 lon1 HRM2_04400
SJ S16 S16.001 Lon-A peptidase MER0158206 lon4 HRM2_30400
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0158108 radA HRM2_03980
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0158132 HRM2_11200
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1037832 HRM2_08910
SJ S16 unassigned family S16 unassigned peptidases MER0158127 lon2 HRM2_09590
SJ S16 unassigned family S16 unassigned peptidases MER0158173 lon3 HRM2_22580
SJ S16 unassigned family S16 unassigned peptidases MER0158175 lonB HRM2_23440
SJ S16 unassigned family S16 unassigned peptidases MER0158257 lonA HRM2_49400
SK S14 S14.001 peptidase Clp (type 1) MER0158109 clpP HRM2_04380
SK S41 S41.001 C-terminal processing peptidase-1 MER0158157 prc HRM2_18800
SK S41 S41.001 C-terminal processing peptidase-1 MER0158158 prc HRM2_18800
SK S41 S41.004 C-terminal processing peptidase-3 MER0158134 ctpA2 HRM2_11490
SK S41 unassigned subfamily S41A unassigned peptidases MER0158122 ctpA1 HRM2_08250
SK S49 unassigned subfamily S49B unassigned peptidases MER0158153 clpP2 HRM2_17740
SK S49 unassigned subfamily S49B unassigned peptidases MER0158181 sppA HRM2_24780
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0158222 HRM2_35290
ST S54 S54.004 AarA peptidase MER0158177 HRM2_23530
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0158200 HRM2_28570
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0158199 HRM2_28470
ST S54 unassigned family S54 unassigned peptidases MER0158228 HRM2_37690
U- U32 U32.002 collagenase (Helicobacter-type) MER0158225 HRM2_36490
U- U32 unassigned family U32 unassigned peptidases MER0158112 HRM2_05700
U- U32 unassigned family U32 unassigned peptidases MER0158161 HRM2_21100
U- U32 unassigned family U32 unassigned peptidases MER0158223 HRM2_35420

GENOME ANALYSIS: Comparison with 13 completely sequenced genomes from order Desulfobacterales
Family Comment
M6 significant presence (1 homologues)
M14 significant presence (1 homologues)
M20 lineage specific expansion (5 homologues)
M48 lineage specific expansion (6 homologues)
M54 significant presence (1 homologues)
M55 significant presence (1 homologues)
M86 significant presence (3 homologues)
S8 lineage specific expansion (4 homologues)
S16 lineage specific expansion (9 homologues)