Sphingobium japonicum

Taxonomy
Taxonomy database identifier: 332056
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Species japonicum
Family Sphingomonadaceae
Genus Sphingobium
Peptidase View peptidase sequences from Sphingobium japonicum
Count of known and putative peptidases: 104, non-peptidase homologues 37
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241844 SJA_C1-16650
AC A8 unassigned family A8 unassigned peptidases MER0202457 lspA SJA_C1-22900
AC A8 unassigned family A8 unassigned peptidases MER0407995 lspA
AD A24 unassigned subfamily A24A unassigned peptidases MER0202461 pulO SJA_C1-23450
AD A24 unassigned subfamily A24A unassigned peptidases MER0681272 EBBID32_32780
AD A24 unassigned subfamily A24B unassigned peptidases MER0202466 cpaA SJA_C1-24450
AD A24 unassigned subfamily A24B unassigned peptidases MER0692687 cpaA
AD A24 unassigned subfamily A24B unassigned peptidases MER0661167 EBBID32_5490
CA C1 unassigned subfamily C1B unassigned peptidases MER0528034 EBBID32_23880
CA C1 unassigned family C1 unassigned peptidases MER0202381 SJA_C1-04510
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716879 hlyB
CA C93 unassigned family C93 unassigned peptidases MER0394556 SJA_C1-22270
CA C96 C96.001 McjB peptidase MER0745788 SJA_P1-00950
CA C96 C96.001 McjB peptidase MER0745942 EBBID32_40300
CA C96 unassigned family C96 unassigned peptidases MER0203745 SJA_C1-30020 SJA_C1-30020
CL C82 unassigned subfamily C82A unassigned peptidases MER0202443 SJA_C1-21630
CL C82 unassigned subfamily C82A unassigned peptidases MER0202478 SJA_C1-27420
CL C82 unassigned subfamily C82A unassigned peptidases MER0740268 EBBID32_22780
CL C82 unassigned subfamily C82A unassigned peptidases MER0743082 EBBID32_30240
CL C82 unassigned subfamily C82A unassigned peptidases MER0461461 SJA_C1-13170
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0202410 SJA_C1-12620
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0314960 gumN SJA_C1-17800
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0331737 gumN SJA_C1-17810
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0813414 EBBID32_42580
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0172040 pepN SJA_C1-00250
MA M1 unassigned family M1 unassigned peptidases MER0202389 npepps SJA_C1-06930
MA M1 unassigned family M1 unassigned peptidases MER0813483 EBBID32_44970
MA M2 unassigned family M2 unassigned peptidases MER0817047 EBBID32_40470
MA M3 unassigned subfamily M3A unassigned peptidases MER0202364 prlC SJA_C2-05500
MA M3 unassigned subfamily M3A unassigned peptidases MER0819481 EBBID32_7260
MA M13 unassigned family M13 unassigned peptidases MER0202376 pepo SJA_C1-02700
MA M13 unassigned family M13 unassigned peptidases MER0830230 EBBID32_21760
MA M41 M41.001 FtsH peptidase MER0202468 ftsH SJA_C1-24660
MA M48 unassigned subfamily M48B unassigned peptidases MER0202374 htpX SJA_C1-02490
MA M48 unassigned subfamily M48C unassigned peptidases MER0202396 SJA_C1-07870
MA M48 unassigned subfamily M48C unassigned peptidases MER0202462 SJA_C1-23980
MA M48 unassigned subfamily M48C unassigned peptidases MER0889384 EBBID32_21740
MA M48 unassigned subfamily M48C unassigned peptidases MER0888166 EBBID32_9440
MA M48 unassigned family M48 unassigned peptidases MER0202395 SJA_C1-07640
MA M56 unassigned family M56 unassigned peptidases MER0202479 SJA_C1-28220
MA M56 unassigned family M56 unassigned peptidases MER0934845 EBBID32_41450
MA M61 M61.001 glycyl aminopeptidase MER0202365 SJA_C1-00610
MA M61 M61.001 glycyl aminopeptidase MER0903883 EBBID32_40340
MC M14 unassigned subfamily M14D unassigned peptidases MER0202489 SJA_C1-33480
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0202439 pqqL SJA_C1-20470
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0202491 pqqL SJA_C1-34380
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0202492 pqqL SJA_C1-34380
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0922712 EBBID32_41690
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0922713 EBBID32_41690
ME M16 unassigned subfamily M16B unassigned peptidases MER0202438 pqqL SJA_C1-20470
ME M16 unassigned subfamily M16B unassigned peptidases MER0924640 EBBID32_34680
MF M17 unassigned family M17 unassigned peptidases MER0202411 pepB SJA_C1-12640
MF M17 unassigned family M17 unassigned peptidases MER0202472 pepA SJA_C1-25520
MF M17 unassigned family M17 unassigned peptidases MER0929855 pepA
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0202433 map SJA_C1-19350
MG M24 M24.009 aminopeptidase P1 MER0202370 pepP SJA_C1-01520
MG M24 unassigned subfamily M24A unassigned peptidases MER0618749
MG M24 unassigned subfamily M24B unassigned peptidases MER0202407 pepP SJA_C1-10530
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0202403 SJA_C1-09600
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0202404 SJA_C1-09610
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0202488 SJA_C1-32650
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0842940 EBBID32_7860
MH M20 unassigned subfamily M20A unassigned peptidases MER0202397 dapE SJA_C1-08340
MH M20 unassigned subfamily M20A unassigned peptidases MER0202416 SJA_C1-14580
MH M20 unassigned subfamily M20A unassigned peptidases MER0846925 dapE
MH M20 unassigned family M20D unassigned peptidases MER0202467 SJA_C1-24650
MH M20 unassigned family M20D unassigned peptidases MER0846289 EBBID32_20440
MH M20 unassigned family M20D unassigned peptidases MER0844002 EBBID32_22250
MH M20 unassigned family M20 unassigned peptidases MER0202430 SJA_C1-17600
MH M20 unassigned family M20 unassigned peptidases MER1231973
MH M28 unassigned subfamily M28A unassigned peptidases MER0194962 SJA_C1-34390
MH M28 unassigned subfamily M28D unassigned peptidases MER0202421 SJA_C1-16420
MH M28 unassigned subfamily M28E unassigned peptidases MER0195149 SJA_C1-20930
MH M28 unassigned subfamily M28E unassigned peptidases MER0202447 SJA_C1-21840
MH M28 unassigned subfamily M28E unassigned peptidases MER1058349
MJ M19 M19.012 Caul_3875-type dipeptidase MER0202442 dpep1 SJA_C1-21200
MJ M19 M19.012 Caul_3875-type dipeptidase MER0787695 EBBID32_25030
MJ M19 M19.012 Caul_3875-type dipeptidase MER0738102 EBBID32_38000
MJ M19 unassigned family M19 unassigned peptidases MER0760435 EBBID32_4140
MJ M38 M38.978 dihydropyrimidinase related protein-5 MER0872664 EBBID32_21940
MJ M38 M38.982 urease MER0202402 ureC SJA_C1-09390
MJ M38 M38.982 urease MER0873626 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0202418 pyrC SJA_C1-15340
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0202476 pyrC SJA_C1-27110
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0202487 SJA_C1-32640
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866905 SJA_C1-13760
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870386 SJA_C1-25310
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0873924 EBBID32_290
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871463 EBBID32_21950
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871940 EBBID32_25050
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862782 EBBID32_25100
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863756 EBBID32_36180
MJ M38 unassigned family M38 unassigned peptidases MER0202354 SJA_C2-00890
MM M50 unassigned subfamily M50A unassigned peptidases MER0202463 SJA_C1-24090
MM M50 unassigned subfamily M50A unassigned peptidases MER0898718 EBBID32_19120
MO M23 M23.009 Mername-AA292 peptidase MER0202477 SJA_C1-27310
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0202375 SJA_C1-02540
MO M23 unassigned subfamily M23B unassigned peptidases MER0202387 SJA_C1-06210
MO M23 unassigned subfamily M23B unassigned peptidases MER0202474 SJA_C1-26700
MO M23 unassigned subfamily M23B unassigned peptidases MER0478829 SJA_C1-13180
MO M23 unassigned subfamily M23B unassigned peptidases MER0389519 SJA_C1-34440
MP M67 unassigned subfamily M67B unassigned peptidases MER0907637 SJA_C1-19400
MP M67 unassigned subfamily M67B unassigned peptidases MER0907335 EBBID32_34820
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0202373 tldD SJA_C1-01930
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0202366 pmbA SJA_C1-00840
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0202484 flhB SJA_C1-30700
PA S1 S01.A08 At5g27660 (Arabidopsis thaliana) MER0202401 SJA_C1-09000
PA S1 unassigned subfamily S1C unassigned peptidases MER0202405 SJA_C1-10230
PA S1 unassigned subfamily S1C unassigned peptidases MER0202475 SJA_C1-26800
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0202417 asnB SJA_C1-15100
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0202429 purF SJA_C1-17540
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458162 gltB SJA_C1-02400
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0202464 glmS SJA_C1-24230
PB S45 S45.002 cephalosporin acylase precursor MER1063657 EBBID32_25020
PB T1 T01.006 HslV component of HslUV peptidase MER0202427 hslV SJA_C1-16930
PB T1 unassigned subfamily T1A unassigned peptidases MER1092610 hslV
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0202490 ggt SJA_C1-34040
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0202356 ggt SJA_C2-01800
PB T3 unassigned family T3 unassigned peptidases MER0202355 ggt SJA_C2-01780
PB T3 unassigned family T3 unassigned peptidases MER1099975 EBBID32_7870
PB T3 unassigned family T3 unassigned peptidases MER1098341 EBBID32_25110
PB T3 unassigned family T3 unassigned peptidases MER1099628 EBBID32_15420
PB T3 unassigned family T3 unassigned peptidases MER1101062 EBBID32_25130
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0202399 trpG SJA_C1-08380
PC C26 C26.964 CTP synthetase MER0450922 pyrG SJA_C1-16140
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0202384 guaA SJA_C1-05730
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0202414 carA SJA_C1-14370
PC C26 unassigned family C26 unassigned peptidases MER0202460 SJA_C1-23160
PC C26 unassigned family C26 unassigned peptidases MER0447317 hisH SJA_C1-15550
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0202361 SJA_C2-03640
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0892105 EBBID32_28420
PE T5 T05.001 ornithine acetyltransferase precursor MER0202422 argJ SJA_C1-16540
PE T5 unassigned family T5 unassigned peptidases MER1102122 argJ
SB S8 unassigned subfamily S8A unassigned peptidases MER0202380 SJA_C1-04080
SB S8 unassigned subfamily S8A unassigned peptidases MER0202419 SJA_C1-15710
SB S8 unassigned subfamily S8A unassigned peptidases MER0990611 EBBID32_5000
SB S8 unassigned subfamily S8A unassigned peptidases MER0971886 EBBID32_37850
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0202426 dpp4 SJA_C1-16910
SC S9 S09.010 oligopeptidase B MER0202371 ptrB SJA_C1-01530
SC S9 S09.012 dipeptidyl-peptidase 5 MER0202469 SJA_C1-25070
SC S9 S09.023 D230019K24Rik peptidase (Mus musculus) MER0202379 SJA_C1-03330
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0202358 SJA_C2-02870
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0202351 SJA_P1-01320
SC S9 S09.A77 dpf-6 g.p. (Caenorhabditis elegans) MER0489368 SJA_C1-18850
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER1116906
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0202483 SJA_C1-30040
SC S9 unassigned subfamily S9A unassigned peptidases MER0202385 preP SJA_C1-05770
SC S9 unassigned subfamily S9A unassigned peptidases MER0994088 EBBID32_350
SC S9 unassigned subfamily S9A unassigned peptidases MER0994546 EBBID32_44820
SC S9 unassigned subfamily S9A unassigned peptidases MER1294215
SC S9 unassigned subfamily S9B unassigned peptidases MER0202377 SJA_C1-02750 SJA_C1-02750
SC S9 unassigned subfamily S9B unassigned peptidases MER0996134 EBBID32_5070
SC S9 unassigned subfamily S9B unassigned peptidases MER0997256 EBBID32_19450
SC S9 unassigned subfamily S9B unassigned peptidases MER0992658 EBBID32_40510
SC S9 unassigned subfamily S9C unassigned peptidases MER0202349 SJA_P1-00930
SC S9 unassigned subfamily S9C unassigned peptidases MER1303877
SC S9 unassigned family S9 unassigned peptidases MER0202432 SJA_C1-18700
SC S9 unassigned family S9 unassigned peptidases MER0202446 SJA_C1-21760
SC S9 unassigned family S9 unassigned peptidases MER0202357 pnbA SJA_C2-02370
SC S9 unassigned family S9 unassigned peptidases MER0202363 aes SJA_C2-05070
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022474 dpp4
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021967 SJA_C1-18700
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025378 SJA_C1-18850
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1021076 SJA_C1-21760
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022640 EBBID32_30030
SC S33 S33.001 prolyl aminopeptidase MER0202393 pip SJA_C1-07360
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0202435 linB SJA_C1-19590
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0202436 ephA SJA_C1-19700
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0202486 SJA_C1-31650
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0202362 SJA_C2-04030
SC S33 unassigned family S33 unassigned peptidases MER0202367 metX SJA_C1-01230
SC S33 unassigned family S33 unassigned peptidases MER0202412 SJA_C1-13680
SC S33 unassigned family S33 unassigned peptidases MER0202413 tpx SJA_C1-14040
SC S33 unassigned family S33 unassigned peptidases MER0202420 SJA_C1-15890
SC S33 unassigned family S33 unassigned peptidases MER0202425 SJA_C1-16880
SC S33 unassigned family S33 unassigned peptidases MER0202448 SJA_C1-21860
SC S33 unassigned family S33 unassigned peptidases MER0202465 pldB SJA_C1-24440
SC S33 unassigned family S33 unassigned peptidases MER0202470 catD SJA_C1-25160
SC S33 unassigned family S33 unassigned peptidases MER0202471 cpo SJA_C1-25290
SC S33 unassigned family S33 unassigned peptidases MER0202352 SJA_P1-01420
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0949146 EBBID32_30080
SE S11 unassigned family S11 unassigned peptidases MER0202423 dacA SJA_C1-16590
SE S11 unassigned family S11 unassigned peptidases MER0202445 ampC SJA_C1-21720
SE S11 unassigned family S11 unassigned peptidases MER0202481 SJA_C1-29130
SE S11 unassigned family S11 unassigned peptidases MER0202485 ampC SJA_C1-31380
SE S11 unassigned family S11 unassigned peptidases MER0975773 EBBID32_2280
SE S11 unassigned family S11 unassigned peptidases MER0950962 EBBID32_9950
SE S12 S12.950 esterase EstB MER0202449 SJA_C1-21980
SE S12 unassigned family S12 unassigned peptidases MER0202372 SJA_C1-01690
SE S12 unassigned family S12 unassigned peptidases MER1027943 EBBID32_46560
SE S12 unassigned family S12 unassigned peptidases MER0472867
SF S24 S24.001 repressor LexA MER0202400 lexA SJA_C1-08440
SF S24 unassigned family S24 unassigned peptidases MER0202394 SJA_C1-07520
SF S24 unassigned family S24 unassigned peptidases MER0202473 SJA_C1-26300
SF S24 unassigned family S24 unassigned peptidases MER1029089 lexA
SF S24 unassigned family S24 unassigned peptidases MER1044198 EBBID32_42170
SF S26 S26.001 signal peptidase I MER0202388 lepB SJA_C1-06650
SF S26 S26.001 signal peptidase I MER0202428 lepB SJA_C1-17120
SF S26 S26.014 TraF peptidase MER0202437 traF SJA_C1-20060
SF S26 S26.014 TraF peptidase MER0202482 traF SJA_C1-29800
SF S26 S26.014 TraF peptidase MER0202353 traF SJA_P1-01840
SF S26 S26.014 TraF peptidase MER1051281 EBBID32_39080
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1048827 EBBID32_3050
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1049086 EBBID32_17740
SF S26 unassigned subfamily S26A unassigned peptidases MER1046521 EBBID32_22930
SF S26 unassigned subfamily S26A unassigned peptidases MER1046695 EBBID32_29870
SF S26 unassigned subfamily S26C unassigned peptidases MER0202350 SJA_P1-01170
SH S78 unassigned family S78 unassigned peptidases MER0202408 SJA_C1-12250
SJ S16 S16.001 Lon-A peptidase MER0202444 lon SJA_C1-21690
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0202406 radA SJA_C1-10500
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0202386 comM SJA_C1-05930
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1035927 EBBID32_9110
SJ S16 unassigned family S16 unassigned peptidases MER1036004 lon
SK S14 S14.001 peptidase Clp (type 1) MER0202434 clpP SJA_C1-19460
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1018267 EBBID32_45410
SK S14 unassigned family S14 unassigned peptidases MER1018131 clpP
SK S41 unassigned subfamily S41A unassigned peptidases MER0202480 prc SJA_C1-28780
SK S41 unassigned subfamily S41A unassigned peptidases MER1056249 EBBID32_25720
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1069708 EBBID32_45410
SK S49 unassigned subfamily S49A unassigned peptidases MER1067378 EBBID32_4330
SK S49 unassigned subfamily S49B unassigned peptidases MER0202458 sppA SJA_C1-22970
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0202398 mccF SJA_C1-08360
SS S66 unassigned family S66 unassigned peptidases MER1086442 EBBID32_4190
ST S54 unassigned family S54 unassigned peptidases MER0202415 SJA_C1-14410
ST S54 unassigned family S54 unassigned peptidases MER1082159 EBBID32_37140

GENOME ANALYSIS: Comparison with 18 completely sequenced genomes from genus Sphingobium
Family Comment
A24 lineage specific expansion (5 homologues)
C1 significant presence (2 homologues)
C39 significant presence (1 homologues)
C56 significant presence (2 homologues)
C93 significant presence (1 homologues)
M1 lineage specific expansion (4 homologues)
M2 significant presence (1 homologues)
M16 lineage specific expansion (7 homologues)
M19 lineage specific expansion (4 homologues)
M20 lineage specific expansion (12 homologues)
M38 lineage specific expansion (14 homologues)
M48 lineage specific expansion (6 homologues)
S8 lineage specific expansion (4 homologues)
S9 lineage specific expansion (23 homologues)
S11 lineage specific expansion (7 homologues)
S15 lineage specific expansion (5 homologues)
S16 lineage specific expansion (5 homologues)
S24 lineage specific expansion (5 homologues)
S26 lineage specific expansion (11 homologues)
S33 lineage specific expansion (15 homologues)
S45 significant presence (1 homologues)
S66 significant presence (2 homologues)
T3 lineage specific expansion (7 homologues)