Thioalkalivibrio sp. K90mix

Taxonomy
Taxonomy database identifier: 396595
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Chromatiales
Family		Ectothiorhodospiraceae
Genus		Thioalkalivibrio
Species		sp. K90mix
Peptidase			View peptidase sequences from Thioalkalivibrio sp. K90mix
Count of known and putative peptidases: 58, non-peptidase homologues 32
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	unassigned	family A8 unassigned peptidases	MER0198222	lspA	TK90_2555
AD	A24	A24.001	type 4 prepilin peptidase 1	MER0198208		TK90_2186
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER1156858
CA	C93	unassigned	family C93 unassigned peptidases	MER0393665		TK90_1308
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0461455		TK90_1327
CO	C40	C40.006	PgpA peptidase	MER0198178		TK90_1300
G-	G5	G05.A04	At3g26085 (Arabidopsis thaliana)	MER0198182		TK90_1361
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0198212		TK90_2227
MA	M1	unassigned	family M1 unassigned peptidases	MER0198170		TK90_1084
MA	M3	M03.004	oligopeptidase A	MER0198142		TK90_0006
MA	M41	M41.001	FtsH peptidase	MER0198163	ftsH	TK90_0703
MA	M48	M48.002	HtpX peptidase	MER0198156	htpX	TK90_0535
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0198167		TK90_1074
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0198160		TK90_0628
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0198205		TK90_2092
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0198216		TK90_2379
MA	M90	unassigned	family M90 unassigned peptidases	MER0228896		TK90_2335
MD	M15	unassigned	subfamily M15D unassigned peptidases	MER0188687		TK90_0077
ME	M16	M16.019	YMXG peptidase	MER0198149		TK90_0171
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0198150		TK90_0172
MF	M17	M17.003	PepA aminopeptidase	MER0198207	pepA	TK90_2115
MF	M17	unassigned	family M17 unassigned peptidases	MER0198169		TK90_1080
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0198186		TK90_1498
MG	M24	M24.004	aminopeptidase P (bacteria)	MER0198193		TK90_1821
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0198187	mtaD	TK90_1506
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0198217		TK90_2410
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0198185		TK90_1490
MO	M23	M23.011	YebA peptidase	MER0198168		TK90_1077
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0198176		TK90_1285
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0198203		TK90_2021
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0198210		TK90_2192
MU	M103	M103.001	TldD peptidase (Escherichia coli)	MER0198200		TK90_1986
MU	M103	M103.UNW	family M103 non-peptidase homologues	MER0198199		TK90_1984
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0198173		TK90_1171
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0198197		TK90_1952
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0198211		TK90_2221
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0198218		TK90_2479
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0198221		TK90_2551
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0198181		TK90_1328
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0198191		TK90_1756
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0198219		TK90_2515
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0198224		TK90_2584
PB	C44	unassigned	family C44 unassigned peptidases	MER0198144		TK90_0032
PB	T1	T01.006	HslV component of HslUV peptidase	MER0198146	hslV	TK90_0116
PB	T2	unassigned	family T2 unassigned peptidases	MER0198184		TK90_1369
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0198145		TK90_0093
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0198215		TK90_2361
PC	C26	C26.957	GMP synthase	MER0198195	guaA	TK90_1912
PC	C26	C26.964	CTP synthetase	MER0448425	pyrG	TK90_1472
PC	C26	C26.965	imidazole glycerol phosphate synthase subunit HisH	MER0446422	hisH	TK90_0126
PC	C26	unassigned	family C26 unassigned peptidases	MER0198152		TK90_0191
PC	C26	unassigned	family C26 unassigned peptidases	MER0198162		TK90_0698
PC	C56	C56.002	DJ-1 putative peptidase	MER0198201		TK90_2019
PC	C56	C56.972	phosphoribosylformylglycinamidine synthase	MER0198172		TK90_1153
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0198164		TK90_0854
PD	N10	unassigned	family N10 unassigned peptide lyases	MER0183179		TK90_0256
PE	T5	T05.001	ornithine acetyltransferase precursor	MER0198209	argJ	TK90_2190
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0192006
SC	S9	S09.A77	dpf-6 g.p. (Caenorhabditis elegans)	MER0198188		TK90_1646
SC	S9	non-peptidase homologue	family S9 non-peptidase homologues	MER0198214		TK90_2350
SC	S9	non-peptidase homologue	family S9 non-peptidase homologues	MER0198220		TK90_2523
SC	S9	unassigned	subfamily S9C unassigned peptidases	MER0198166		TK90_1053
SC	S9	unassigned	family S9 unassigned peptidases	MER0198153		TK90_0234
SC	S10	unassigned	family S10 unassigned peptidases	MER0198161		TK90_0684
SC	S33	S33.001	prolyl aminopeptidase	MER0198223		TK90_2581
SC	S33	S33.A03	At5g19850 (Arabidopsis thaliana)-type peptidase	MER0198165		TK90_0998
SC	S33	unassigned	family S33 unassigned peptidases	MER0198189		TK90_1666
SE	S11	unassigned	family S11 unassigned peptidases	MER0198198		TK90_1970
SE	S13	S13.003	D-Ala-D-Ala carboxypeptidase PBP3	MER0198155		TK90_0467
SF	S24	S24.001	repressor LexA	MER0198194	lexA	TK90_1832
SF	S26	S26.001	signal peptidase I	MER0198196		TK90_1949
SJ	S16	S16.001	Lon-A peptidase	MER0198159		TK90_0575
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0198154		TK90_0423
SJ	S16	non-peptidase homologue	family S16 non-peptidase homologues	MER0198147		TK90_0150
SJ	S16	non-peptidase homologue	family S16 non-peptidase homologues	MER0198171		TK90_1136
SK	S14	S14.001	peptidase Clp (type 1)	MER0198158	clpP	TK90_0573
SK	S41	S41.004	C-terminal processing peptidase-3	MER0198202		TK90_2020
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER0198174		TK90_1193
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER0198192		TK90_1759
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0198206		TK90_2106
ST	S54	S54.025	At5g25752 rhomboid peptidase	MER0198175		TK90_1220
ST	S54	S54.025	At5g25752 rhomboid peptidase	MER0198183		TK90_1367

GENOME ANALYSIS: Comparison with 12 completely sequenced genomes from family Ectothiorhodospiraceae
Family	Comment
C40	significant presence (1 homologues)
C82	significant decrease in homologues (1 homologues)
C93	significant presence (1 homologues)
M15	significant presence (1 homologues)
M16	significant decrease in homologues (2 homologues)
S10	significant presence (1 homologues)
S13	significant presence (1 homologues)
S16	lineage specific expansion (4 homologues)
S24	significant decrease in homologues (1 homologues)
S41	significant decrease in homologues (1 homologues)
T2	significant presence (1 homologues)