Candidatus Hamiltonella defensa

Taxonomy
Taxonomy database identifier: 138072
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Enterobacteriales
Family		Enterobacteriaceae
Genus		Candidatus Hamiltonella
Species		defensa
Peptidase			View peptidase sequences from Candidatus Hamiltonella defensa
Count of known and putative peptidases: 39, non-peptidase homologues 4
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	A08.001	signal peptidase II	MER0280274	lspA	HDEF_0832
AC	A8	A08.001	signal peptidase II	MER1152405
AD	A24	A24.003	type 4 prepilin peptidase 2	MER0184760	pilD/pppA	HDEF_0340
AD	A24	non-peptidase homologue	subfamily A24A non-peptidase homologues	MER0693008	tadV
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER1157724
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER1157729
CA	C58	C58.001	YopT peptidase	MER0320564	yopT_2	HDEF_1155
CA	C58	unassigned	subfamily C58A unassigned peptidases	MER0186227	yopT_1	HDEF_1103
CD	C80	non-peptidase homologue	family C80 non-peptidase homologues	MER0321715
CD	C80	unassigned	family C80 unassigned peptidases	MER0186404	rtxA_03	HDEF_0439
CD	C80	unassigned	family C80 unassigned peptidases	MER0186405	rtxA_08	HDEF_0849
CD	C80	unassigned	family C80 unassigned peptidases	MER0186406	rtxA_10	HDEF_1157
CD	C80	unassigned	family C80 unassigned peptidases	MER0186407	rtxA_18	HDEF_1405
CD	C80	unassigned	family C80 unassigned peptidases	MER0186408	rtxA_21	HDEF_1711
CD	C80	unassigned	family C80 unassigned peptidases	MER0186409	rtxA_22	HDEF_1936
CD	C80	unassigned	family C80 unassigned peptidases	MER0186410	rtxA_27	HDEF_2268
CD	C80	unassigned	family C80 unassigned peptidases	MER0186411	rtxA_30	HDEF_2298
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0335604	pepN	HDEF_0876
MA	M3	M03.004	oligopeptidase A	MER0187731	prlC	HDEF_1836
MA	M10	unassigned	subfamily M10B unassigned peptidases	MER0825415	HBTMEAM1__140006
MA	M10	unassigned	subfamily M10B unassigned peptidases	MER1209566
MA	M10	unassigned	subfamily M10B unassigned peptidases	MER0188078		HDEF_0400
MA	M41	M41.001	FtsH peptidase	MER0239084	hflB	HDEF_1964
MA	M48	M48.002	HtpX peptidase	MER0190902	htpX_1	HDEF_1485
MA	M48	M48.023	BepA (Escherichia coli)	MER0888759	yfgC
MA	M91	M91.001	NleD peptidase (Escherichia coli-type)	MER0129286	nleD	HDEF_1119
MF	M17	M17.003	PepA aminopeptidase	MER0277349	pepA	HDEF_0221
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0239243	map	HDEF_0151
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0973440
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0370248	dapE	HDEF_0094
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0894195	rseP
MO	M23	M23.011	YebA peptidase	MER0189656		HDEF_0652
NB	N6	N06.002	SpaS protein (Salmonella sp.)	MER0181704	spaS	HDEF_1509
NB	N6	N06.003	EscU protein (Escherichia coli)	MER0181705	ssaU	HDEF_2248
PA	S1	S01.273	DegP peptidase	MER0311748	degP_2	HDEF_1488
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER1270416
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0208513	degS	HDEF_1818
PB	T1	T01.006	HslV component of HslUV peptidase	MER0228535	hslV	HDEF_1271
SC	S33	S33.994	BioH protein (Escherichi coli)	MER0210843	bioH	HDEF_0547
SE	S11	unassigned	family S11 unassigned peptidases	MER0192806	dacA	HDEF_0674
SF	S24	unassigned	family S24 unassigned peptidases	MER1043478	P1
SF	S24	unassigned	family S24 unassigned peptidases	MER1041646	HBTMEAM1__1330001
SF	S26	S26.001	signal peptidase I	MER0264346	lepB	HDEF_0531
SF	S26	S26.026	PA1303 peptidase (Pseudomonas sp.)	MER0333541		HDEF_0743
SJ	S16	S16.001	Lon-A peptidase	MER0233307	lon	HDEF_0807
SJ	S16	unassigned	family S16 unassigned peptidases	MER1033963	radA
SJ	S16	unassigned	family S16 unassigned peptidases	MER1036995	ycbZ
SK	S14	S14.001	peptidase Clp (type 1)	MER0299121
SK	S14	non-peptidase homologue	family S14 non-peptidase homologues	MER1017100	HBTMEAM1__1780002
SK	S41	S41.001	C-terminal processing peptidase-1	MER0288417	prc_1	HDEF_1486
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER1069155	sohB
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER1354043
SK	S49	unassigned	family S49 unassigned peptidases	MER0277256	sppA	HDEF_0642
SS	S66	unassigned	family S66 unassigned peptidases	MER0320374		HDEF_0800
U-	U69	unassigned	family U69 unassigned peptidases	MER0276949
U-	U69	unassigned	family U69 unassigned peptidases	MER0195906		HDEF_0280
U-	U69	unassigned	family U69 unassigned peptidases	MER0195540		HDEF_0708

GENOME ANALYSIS: Comparison with 111 completely sequenced genomes from family Enterobacteriaceae
Family	Comment
C58	significant presence (2 homologues)
C80	significant presence (9 homologues)
M10	significant presence (3 homologues)
M91	significant presence (1 homologues)