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Allochromatium vinosum

Taxonomy
Taxonomy database identifier: 1049
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Chromatiales
Family Chromatiaceae
Genus Allochromatium
Species vinosum
Peptidase View peptidase sequences from Allochromatium vinosum
Count of known and putative peptidases: 76, non-peptidase homologues 37
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0241936 Alvin_0290
AA A32 unassigned family A32 unassigned peptidases MER0241882 Alvin_0291
AC A8 unassigned family A8 unassigned peptidases MER0197903 lspA Alvin_1978
AD A24 A24.001 type 4 prepilin peptidase 1 MER0197842 Alvin_0161
AE A31 A31.002 HyaD peptidase MER0184881 Alvin_2306
AE A31 unassigned family A31 unassigned peptidases MER0197900 Alvin_1869
AE A31 unassigned family A31 unassigned peptidases MER0184879 Alvin_0806
AE A31 unassigned family A31 unassigned peptidases MER0184880 Alvin_1451
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716095 Alvin_0747
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244045 Alvin_2066
CL C82 unassigned subfamily C82A unassigned peptidases MER0197890 Alvin_1623
CL C82 unassigned subfamily C82A unassigned peptidases MER0197905 Alvin_2006
CL C82 unassigned subfamily C82A unassigned peptidases MER0461451 Alvin_1858
CL C82 unassigned subfamily C82A unassigned peptidases MER0461452 Alvin_2968
CO C40 unassigned family C40 unassigned peptidases MER0197914 Alvin_2275
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0197876 Alvin_1024
MA M1 unassigned family M1 unassigned peptidases MER0197916 Alvin_2487
MA M3 M03.004 oligopeptidase A MER0197856 Alvin_0305
MA M41 M41.001 FtsH peptidase MER0197863 ftsH1 Alvin_0491
MA M41 M41.001 FtsH peptidase MER0197913 ftsH2 Alvin_2271
MA M48 M48.002 HtpX peptidase MER0197874 htpX Alvin_0909
MA M48 unassigned subfamily M48C unassigned peptidases MER0197909 Alvin_2110
MA M61 unassigned family M61 unassigned peptidases MER0191114 Alvin_0284
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0197881 Alvin_1286
MD M15 unassigned subfamily M15D unassigned peptidases MER0188708 Alvin_3183
MD M15 unassigned subfamily M15D unassigned peptidases MER0188709 Alvin_0999
MD M74 unassigned family M74 unassigned peptidases MER0191339 Alvin_2396
ME M16 M16.019 YMXG peptidase MER0197930 Alvin_2888
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0197928 Alvin_2887
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0197929 Alvin_2887
MF M17 M17.003 PepA aminopeptidase MER0197868 pepA Alvin_0636
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0197906 Alvin_2043
MG M24 M24.004 aminopeptidase P (bacteria) MER0197931 Alvin_2905
MG M24 unassigned subfamily M24A unassigned peptidases MER0542235
MH M20 unassigned subfamily M20A unassigned peptidases MER0197861 dapE Alvin_0412
MH M20 unassigned subfamily M20A unassigned peptidases MER0197926 Alvin_2832
MH M42 unassigned family M42 unassigned peptidases MER0197888 Alvin_1618
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0197844 Alvin_0204
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0197904 mtaD Alvin_1990
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0891914 Alvin_2194
MM M50 unassigned subfamily M50B unassigned peptidases MER0197907 Alvin_2051
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0197872 Alvin_0779
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0197939 Alvin_3026
MO M23 unassigned subfamily M23B unassigned peptidases MER0197840 Alvin_0142
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0197918 Alvin_2520
MU M103 M103.UNW family M103 non-peptidase homologues MER0197859 Alvin_0398
MU M103 M103.UNW family M103 non-peptidase homologues MER0197917 Alvin_2519
MU M103 M103.UPW family M103 unassigned peptidases MER0197858 Alvin_0397
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0197932 Alvin_2926
NB N6 non-peptidase homologue family N6 non-lyase homologues MER0910023 Alvin_0658
PA S1 unassigned subfamily S1C unassigned peptidases MER0197864 Alvin_0520
PA S1 unassigned subfamily S1C unassigned peptidases MER0197882 Alvin_1314
PA S1 unassigned subfamily S1C unassigned peptidases MER0197894 Alvin_1722
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0197877 Alvin_1026
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0197889 Alvin_1620
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0197901 Alvin_1919
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458150 Alvin_0033
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0197838 Alvin_0049
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0197855 Alvin_0239
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0197896 Alvin_1778
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0197924 Alvin_2723
PB T1 T01.006 HslV component of HslUV peptidase MER0197936 hslV Alvin_2979
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0197843 Alvin_0168
PC C26 C26.957 GMP synthase MER0197922 guaA Alvin_2707
PC C26 C26.964 CTP synthetase MER0448088 pyrG Alvin_0389
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0450189 Alvin_1138
PC C26 unassigned family C26 unassigned peptidases MER0197860 Alvin_0405
PC C26 unassigned family C26 unassigned peptidases MER0197869 Alvin_0711
PC C26 unassigned family C26 unassigned peptidases MER0197921 Alvin_2665
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0197887 Alvin_1592
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0197923 Alvin_2721
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0197937 Alvin_3024
PD N10 unassigned family N10 unassigned peptide lyases MER0182850 gyrB Alvin_0031
PD N10 unassigned family N10 unassigned peptide lyases MER0223457 Alvin_0467
PD N10 unassigned family N10 unassigned peptide lyases MER0224226 Alvin_0467
PD N10 unassigned family N10 unassigned peptide lyases MER0194262 Alvin_1987
PD N10 unassigned family N10 unassigned peptide lyases MER0224333 Alvin_1995
PD N10 unassigned family N10 unassigned peptide lyases MER0224337 Alvin_1995
PE T5 T05.001 ornithine acetyltransferase precursor MER0197841 argJ Alvin_0144
SB S8 unassigned subfamily S8A unassigned peptidases MER0197925 Alvin_2786
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209397 Alvin_1807
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210762 Alvin_1808
SC S9 unassigned family S9 unassigned peptidases MER0197897 Alvin_1830
SC S33 S33.001 prolyl aminopeptidase MER0197839 Alvin_0057
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0211649 phaC
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0197867 Alvin_0629
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208767 phaC
SC S33 unassigned family S33 unassigned peptidases MER0197866 bioH Alvin_0524
SC S33 unassigned family S33 unassigned peptidases MER0197871 Alvin_0765
SC S33 unassigned family S33 unassigned peptidases MER0197885 Alvin_1549
SC S33 unassigned family S33 unassigned peptidases MER0197895 Alvin_1776
SC S33 unassigned family S33 unassigned peptidases MER0197898 Alvin_1835
SC S33 unassigned family S33 unassigned peptidases MER0197919 Alvin_2571
SE S11 S11.007 penicillin-binding protein 4 (Neisseria-type) peptidase MER0197911 Alvin_2189
SE S11 unassigned family S11 unassigned peptidases MER0197927 Alvin_2864
SE S13 unassigned family S13 unassigned peptidases MER0197865 Alvin_0521
SF S26 S26.001 signal peptidase I MER0197893 Alvin_1720
SJ S16 S16.001 Lon-A peptidase MER0197884 Alvin_1426
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0197880 Alvin_1131
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0197915 Alvin_2324
SJ S16 unassigned family S16 unassigned peptidases MER0197875 Alvin_0969
SK S14 S14.001 peptidase Clp (type 1) MER0197883 clpP Alvin_1424
SK S41 S41.001 C-terminal processing peptidase-1 MER0197873 Alvin_0799
SK S41 S41.004 C-terminal processing peptidase-3 MER0197938 Alvin_3025
SK S41 unassigned subfamily S41A unassigned peptidases MER0197920 Alvin_2654
SK S49 unassigned subfamily S49B unassigned peptidases MER0197870 Alvin_0729
SK S49 unassigned subfamily S49B unassigned peptidases MER0197886 Alvin_1550
U- U32 U32.002 collagenase (Helicobacter-type) MER0197857 Alvin_0364
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0197879 Alvin_1066
U- U32 unassigned family U32 unassigned peptidases MER0197878 Alvin_1065

GENOME ANALYSIS: Comparison with 14 completely sequenced genomes from family Chromatiaceae
Family Comment
C39 significant presence (1 homologues)
C44 lineage specific expansion (8 homologues)
M48 significant decrease in homologues (2 homologues)
M74 significant presence (1 homologues)
N10 significant presence (6 homologues)
S1 significant decrease in homologues (3 homologues)
S8 significant decrease in homologues (1 homologues)
S13 significant presence (1 homologues)
S33 lineage specific expansion (10 homologues)
U32 significant presence (3 homologues)

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Page created 8-September-2023

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