Alistipes shahii

Taxonomy
Taxonomy database identifier: 328814
Superkingdom Bacteria
Phylum Bacteroidetes
Order Bacteroidales
Family Rikenellaceae
Genus Alistipes
Species shahii
Peptidase View peptidase sequences from Alistipes shahii
Count of known and putative peptidases: 34, non-peptidase homologues 4
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0296178 lspA AL1_00620
CA C1 unassigned subfamily C1A unassigned peptidases MER0428084 AL1_17240
CA C10 unassigned family C10 unassigned peptidases MER0204597 AL1_05470
CL C82 unassigned subfamily C82A unassigned peptidases MER0462851 AL1_06450
MA M3 unassigned subfamily M3A unassigned peptidases MER0340407 AL1_26050
MA M3 unassigned subfamily M3A unassigned peptidases MER0340296 AL1_26060
MA M13 M13.017 oligopeptidase O (Porphyromonas gingivalis) MER0289159 AL1_15760
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0363103 ftsH AL1_29640
MA M49 M49.003 dipeptidyl-peptidase IIIB (Bacteroides thetaiotaomicron-type) MER0302076 AL1_29480
MA M56 unassigned family M56 unassigned peptidases MER0934412 AL1_27820
MA M56 unassigned family M56 unassigned peptidases MER0899613 AL1_29840
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469347 AL1_06280
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0470783 AL1_28740
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0499201
ME M16 unassigned subfamily M16B unassigned peptidases MER0391884 AL1_13420
ME M16 unassigned subfamily M16B unassigned peptidases MER0390679 AL1_16650
ME M16 unassigned subfamily M16B unassigned peptidases MER0391591 AL1_27770
ME M16 unassigned family M16 unassigned peptidases MER0390792 AL1_29520
MG M24 unassigned subfamily M24A unassigned peptidases MER0394766 map AL1_18010
MG M24 unassigned subfamily M24B unassigned peptidases MER0481218 AL1_11110
MH M20 M20.003 peptidase T MER0303370 pepT AL1_30480
MH M20 M20.012 Pep581 peptidase MER0303602 AL1_12290
MH M20 unassigned subfamily M20C unassigned peptidases MER0303647 AL1_28250
MH M20 unassigned family M20D unassigned peptidases MER0373698 AL1_25300
MH M20 unassigned subfamily M20F unassigned peptidases MER0499199
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0499194
MJ M38 unassigned family M38 unassigned peptidases MER0499198
MJ M38 unassigned family M38 unassigned peptidases MER0499219
MO M23 M23.009 Mername-AA292 peptidase MER0389490 AL1_21110
MO M23 M23.011 YebA peptidase MER0387898 AL1_03880
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0499196
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0499202
MO M23 unassigned subfamily M23B unassigned peptidases MER0387920 AL1_03890
MO M23 unassigned subfamily M23B unassigned peptidases MER0387334 AL1_07010
MO M23 unassigned subfamily M23B unassigned peptidases MER0479436 AL1_13290
PA S1 unassigned subfamily S1C unassigned peptidases MER0499212 AL1_25390
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0279340 AL1_16030
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0229962 AL1_16890
PA S46 unassigned family S46 unassigned peptidases MER0312693 AL1_16630
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305696 AL1_30750
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0454930 glmS AL1_05080
PB C59 unassigned family C59 unassigned peptidases MER0914770 AL1_02020
PB C69 unassigned family C69 unassigned peptidases MER0386772 AL1_07050
PC C26 C26.957 GMP synthase MER0437590 guaA AL1_11620
PC C26 C26.964 CTP synthetase MER0437591 pyrG AL1_14200
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0437593 hisH AL1_32330
PC C26 unassigned family C26 unassigned peptidases MER0437592 carA AL1_30900
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0732068 AL1_09420
PC S51 S51.001 dipeptidase E MER0314016 AL1_13080
SB S8 S08.154 SUB2 g.p. (Toxoplasma gondii) MER0499191
SB S8 S08.154 SUB2 g.p. (Toxoplasma gondii) MER0499221
SB S8 unassigned subfamily S8A unassigned peptidases MER0499195
SB S8 unassigned subfamily S8A unassigned peptidases MER0499207
SB S8 unassigned subfamily S8A unassigned peptidases MER0499213
SB S8 unassigned subfamily S8A unassigned peptidases MER0499215
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0329105 AL1_30220
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0499203
SC S9 unassigned subfamily S9A unassigned peptidases MER0326578 AL1_11090
SC S9 unassigned subfamily S9A unassigned peptidases MER0325815 AL1_23210
SC S9 unassigned subfamily S9B unassigned peptidases MER0491697 AL1_28330
SC S9 unassigned subfamily S9B unassigned peptidases MER0488887 AL1_31730
SC S9 unassigned subfamily S9B unassigned peptidases MER1297947
SC S9 unassigned subfamily S9C unassigned peptidases MER0499217
SC S9 unassigned family S9 unassigned peptidases MER0499206
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1024582 AL1_30220
SC S15 unassigned family S15 unassigned peptidases MER1025897 AL1_11090
SC S15 unassigned family S15 unassigned peptidases MER1021235 AL1_28330
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0499200
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0499211
SF S24 S24.003 UmuD protein MER0307368 AL1_12480
SF S24 S24.005 irvR self-cleaving protein MER0499192
SF S24 unassigned family S24 unassigned peptidases MER0499205
SF S26 unassigned subfamily S26A unassigned peptidases MER0333516 AL1_27740
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0473933 AL1_02440
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0499204
SJ S16 unassigned family S16 unassigned peptidases MER0360736 lon AL1_29740
SK S14 S14.001 peptidase Clp (type 1) MER0358431 clpP AL1_25350
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0360123 AL1_15430
SK S41 unassigned subfamily S41A unassigned peptidases MER0337831 AL1_05320
SK S41 unassigned subfamily S41A unassigned peptidases MER0338272 AL1_10870
SK S41 unassigned subfamily S41A unassigned peptidases MER0337800 AL1_14890
SK S49 unassigned subfamily S49B unassigned peptidases MER0301025 AL1_16080
ST S54 S54.025 At5g25752 rhomboid peptidase MER0499214
U- U32 U32.001 collagenase (Porphyromonas-type) MER0325469
U- U32 unassigned family U32 unassigned peptidases MER0403637 AL1_25910

GENOME ANALYSIS: Comparison with 9 completely sequenced genomes from family Rikenellaceae
Family Comment
C82 significant presence (1 homologues)
M20 significant decrease in homologues (5 homologues)
S9 lineage specific expansion (9 homologues)