Raphidiopsis brookii

Taxonomy
Taxonomy database identifier: 668331
Superkingdom Bacteria
Phylum Cyanobacteria
Order Nostocales
Family Nostocaceae
Genus Raphidiopsis
Species brookii
Peptidase View peptidase sequences from Raphidiopsis brookii
Count of known and putative peptidases: 57, non-peptidase homologues 11
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0401216 lspA CRD_00924
AD A24 unassigned subfamily A24A unassigned peptidases MER0276897 CRD_02796
CA C1 unassigned subfamily C1B unassigned peptidases MER0428579
CA C39 C39.001 bacteriocin-processing peptidase MER0279854 CRD_00997
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0302395
CA C39 unassigned family C39 unassigned peptidases MER0280526 CRD_01705
CL C82 unassigned subfamily C82A unassigned peptidases MER0321888
CL C82 unassigned subfamily C82A unassigned peptidases MER0462292
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0377551 CRD_01157
G- G5 unassigned family G5 unassigned peptidases MER0911164 CRD_02657
G- G5 unassigned family G5 unassigned peptidases MER0936487 CRD_02996
MA M1 unassigned family M1 unassigned peptidases MER0335109 CRD_02525
MA M3 M03.A01 TOP1 peptidase (Arabidopsis thaliana) MER0339539
MA M41 M41.017 FtsH-SLR0228 peptidase MER0362442 ftsH CRD_02037
MA M41 M41.017 FtsH-SLR0228 peptidase MER0362737 ftsH CRD_01717
MA M41 M41.024 AtFtsH5 peptidase MER0238569 ftsH1 CRD_00880
MA M41 unassigned family M41 unassigned peptidases MER0362848 ftsH CRD_01284
MA M48 M48.004 HtpX-2 peptidase MER0888032 CRD_01551
MA M48 M48.019 GSU1437 putative peptidase MER0886597 CRD_03020
MA M48 M48.021 metallopeptidase PGM48 (Arabidopsis thaliana) MER0884368 CRD_02322
MA M61 unassigned family M61 unassigned peptidases MER0310231 CRD_00826
MD M15 unassigned subfamily M15B unassigned peptidases MER0311846 CRD_01547
MD M15 unassigned subfamily M15D unassigned peptidases MER0386279 CRD_01801
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0392002 CRD_00452
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0914956 CRD_02426
ME M16 unassigned subfamily M16B unassigned peptidases MER0391758 CRD_00837
ME M16 unassigned subfamily M16B unassigned peptidases MER0391136 CRD_00453
ME M16 unassigned subfamily M16B unassigned peptidases MER0470521
MF M17 M17.A03 At2g24200 (Arabidopsis thaliana) MER0339899 pepA CRD_01336
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0234058 CRD_01790
MG M24 unassigned subfamily M24A unassigned peptidases MER0394538 map CRD_00057
MG M24 unassigned subfamily M24B unassigned peptidases MER0277025 CRD_01654
MH M20 unassigned family M20D unassigned peptidases MER0304014
MH M20 unassigned family M20D unassigned peptidases MER0371849 CRD_02771
MJ M38 M38.982 urease MER0872245 ureC
MM M50 unassigned subfamily M50B unassigned peptidases MER0893049 CRD_02849
MO M23 M23.009 Mername-AA292 peptidase MER0388227 CRD_02025
MO M23 unassigned subfamily M23B unassigned peptidases MER0314511 CRD_01086
MO M23 unassigned subfamily M23B unassigned peptidases MER0387303 CRD_01634
MO M23 unassigned subfamily M23B unassigned peptidases MER0387204 CRD_02713
MU M103 M103.UNW family M103 non-peptidase homologues MER0329480 CRD_00413
MU M103 M103.UNW family M103 non-peptidase homologues MER0329118 CRD_02933
MU M103 M103.UPW family M103 unassigned peptidases MER0332002 CRD_00412
MU M103 M103.UPW family M103 unassigned peptidases MER0332617 CRD_00582
PA S1 S01.482 HtrA peptidase (Synechocystis-type) MER0406486
PA S1 unassigned subfamily S1B unassigned peptidases MER0961244 CRD_01036
PA S1 unassigned subfamily S1C unassigned peptidases MER0407330
PA S1 unassigned subfamily S1C unassigned peptidases MER0211389
PA S1 unassigned subfamily S1C unassigned peptidases MER0213993
PA S1 unassigned subfamily S1C unassigned peptidases MER0210598
PA S1 unassigned subfamily S1C unassigned peptidases MER0216631
PA S1 unassigned subfamily S1C unassigned peptidases MER0211346 CRD_01977
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305605 CRD_02908
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459419
PB C44 C44.A08 glutamine-fructose-6-phosphate transaminase precursor (Dictyostelium discoideum) MER0456251
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459420
PB C44 unassigned family C44 unassigned peptidases MER0459418
PB T2 unassigned family T2 unassigned peptidases MER1096085 CRD_02850
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436294
PC C26 C26.957 GMP synthase MER0439555
PC C26 C26.964 CTP synthetase MER0450079
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439313
PC C26 unassigned family C26 unassigned peptidases MER0443398
PC C26 unassigned family C26 unassigned peptidases MER0440396
PC S51 unassigned family S51 unassigned peptidases MER1067518 CRD_00484
PD N10 unassigned family N10 unassigned peptide lyases MER0224341 CRD_00667
PD N10 unassigned family N10 unassigned peptide lyases MER0194248 CRD_00599
PE T5 T05.002 ArgJ protein (archea) MER0380519 argJ CRD_00873
S- S48 S48.001 HetR putative peptidase MER0233626 hetR CRD_01519
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0985016 CRD_00685
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0977874 CRD_00686
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0988450 CRD_02613
SB S8 unassigned subfamily S8A unassigned peptidases MER0324951
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213497
SC S33 unassigned family S33 unassigned peptidases MER0213317
SC S33 unassigned family S33 unassigned peptidases MER0209044
SC S33 unassigned family S33 unassigned peptidases MER0215425
SC S33 unassigned family S33 unassigned peptidases MER0213473
SE S11 unassigned family S11 unassigned peptidases MER0949952 CRD_02355
SE S13 S13.002 D-Ala-D-Ala carboxypeptidase (Actinomadura-type) MER0278974 CRD_00448
SE S13 unassigned family S13 unassigned peptidases MER0357077 CRD_01957
SF S24 S24.001 repressor LexA MER0375757 lexA CRD_00833
SF S26 S26.008 thylakoidal processing peptidase MER0246663 CRD_02310
SF S26 S26.A02 Plsp1 peptidase (Arabidopsis thaliana) MER0246666 CRD_01482
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475543
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1031409 CRD_00617
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1037234 CRD_02847
SK S14 S14.001 peptidase Clp (type 1) MER0359447 CRD_01199
SK S14 S14.001 peptidase Clp (type 1) MER0358524 clpP CRD_01200
SK S14 S14.001 peptidase Clp (type 1) MER0358065 clpP CRD_02678
SK S14 S14.001 peptidase Clp (type 1) MER0358114 clpP CRD_03057
SK S14 S14.A02 At5g23140 (Arabidopsis thaliana)-type peptidase MER0359572 clpP CRD_01198
SK S41 S41.008 CtpA peptidase (Synechocystis-type) MER0338018 CRD_00303
SK S41 S41.009 CtpB peptidase MER0337756 CRD_00545
SK S49 unassigned subfamily S49B unassigned peptidases MER1066706 CRD_00593
SK S49 unassigned subfamily S49B unassigned peptidases MER0300216 CRD_01712
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0320188 CRD_00349
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0320265 CRD_02430
U- U32 unassigned family U32 unassigned peptidases MER0325665

GENOME ANALYSIS: Comparison with 10 completely sequenced genomes from family Nostocaceae
Family Comment