Thioalkalimicrobium cyclicum

Taxonomy
Taxonomy database identifier: 147268
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Gammaproteobacteria
Order		Thiotrichales
Family		Piscirickettsiaceae
Genus		Thioalkalimicrobium
Species		cyclicum
Peptidase			View peptidase sequences from Thioalkalimicrobium cyclicum
Count of known and putative peptidases: 39, non-peptidase homologues 14
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	A08.001	signal peptidase II	MER0248457	lspA	Thicy_1175
AD	A24	unassigned	subfamily A24A unassigned peptidases	MER0249876		Thicy_1031
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0461587		Thicy_1124
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0249867		Thicy_0355
MA	M3	M03.004	oligopeptidase A	MER0248839		Thicy_1640
MA	M26	non-peptidase homologue	family M26 non-peptidase homologues	MER0293141
MA	M26	unassigned	family M26 unassigned peptidases	MER1245616
MA	M41	M41.001	FtsH peptidase	MER0248724	ftsH	Thicy_0632
MA	M48	M48.002	HtpX peptidase	MER0248617	htpX	Thicy_1247
MA	M48	unassigned	subfamily M48A unassigned peptidases	MER0249034		Thicy_0247
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0248446		Thicy_0220
MA	M48	unassigned	subfamily M48C unassigned peptidases	MER0248877		Thicy_1653
MA	M61	unassigned	family M61 unassigned peptidases	MER0247973		Thicy_0519
MA	M90	unassigned	family M90 unassigned peptidases	MER0227880		Thicy_0573
ME	M16	M16.019	YMXG peptidase	MER0391044		Thicy_0269
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0249095		Thicy_0270
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0249096		Thicy_0270
ME	M16	unassigned	subfamily M16C unassigned peptidases	MER0248919		Thicy_0858
MF	M17	unassigned	family M17 unassigned peptidases	MER0250124	pepA	Thicy_1433
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0249756	map	Thicy_0972
MG	M24	M24.004	aminopeptidase P (bacteria)	MER0248419		Thicy_1158
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0247806	dapE	Thicy_1116
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0249193		Thicy_0298
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0898097	Thicy_0742
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0896371	Thicy_0965
MO	M23	M23.009	Mername-AA292 peptidase	MER0248480		Thicy_1189
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0248704		Thicy_0619
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0249457		Thicy_0690
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0248983		Thicy_0888
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0248710		Thicy_0628
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0249038		Thicy_0253
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0249735	glmS	Thicy_0005
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0458363		Thicy_0210
PB	T1	T01.006	HslV component of HslUV peptidase	MER0249906	hslV	Thicy_0373
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0249180		Thicy_0294
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0247632		Thicy_0101
PC	C26	C26.964	CTP synthetase	MER0447539	pyrG	Thicy_0709
PC	C26	unassigned	family C26 unassigned peptidases	MER0247807	guaA	Thicy_0455
PC	C26	unassigned	family C26 unassigned peptidases	MER0247642	carA	Thicy_1054
PC	C26	unassigned	family C26 unassigned peptidases	MER0445082	hisH	Thicy_1537
PC	C56	C56.972	phosphoribosylformylglycinamidine synthase	MER0248346	purL	Thicy_0834
PE	T5	T05.001	ornithine acetyltransferase precursor	MER0248421	argJ	Thicy_0206
SB	S8	non-peptidase homologue	subfamily S8A non-peptidase homologues	MER0980758	Thicy_0040
SC	S33	S33.001	prolyl aminopeptidase	MER0249775		Thicy_0032
SC	S33	unassigned	family S33 unassigned peptidases	MER0381329		Thicy_1391
SE	S11	unassigned	family S11 unassigned peptidases	MER0249212		Thicy_1256
SF	S24	S24.001	repressor LexA	MER0249550		Thicy_0737
SF	S24	S24.003	UmuD protein	MER0248365		Thicy_0839
SF	S26	S26.001	signal peptidase I	MER0248982		Thicy_0886
SJ	S16	S16.001	Lon-A peptidase	MER0249382	lon	Thicy_0661
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0247887		Thicy_0485
SJ	S16	non-peptidase homologue	family S16 non-peptidase homologues	MER0248032		Thicy_1511
SJ	S16	unassigned	family S16 unassigned peptidases	MER0250051	lon	Thicy_0437
SJ	S16	unassigned	family S16 unassigned peptidases	MER0247751		Thicy_1097
SK	S14	S14.001	peptidase Clp (type 1)	MER0249380	clpP	Thicy_0659
SK	S41	unassigned	subfamily S41A unassigned peptidases	MER0249403		Thicy_1340
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER1068057	Thicy_0759
U-	U32	U32.002	collagenase (Helicobacter-type)	MER0247781		Thicy_1109

GENOME ANALYSIS: Comparison with 9 completely sequenced genomes from family Piscirickettsiaceae
Family	Comment
C44	significant decrease in homologues (4 homologues)
C82	significant decrease in homologues (1 homologues)
M16	lineage specific expansion (4 homologues)
M20	significant decrease in homologues (1 homologues)
M24	significant decrease in homologues (2 homologues)
M26	significant presence (2 homologues)
S16	lineage specific expansion (5 homologues)
S33	significant decrease in homologues (2 homologues)
S49	significant decrease in homologues (1 homologues)
T3	significant decrease in homologues (1 homologues)