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Pseudogulbenkiania sp. NH8B

Taxonomy
Taxonomy database identifier: 748280
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Neisseriales
Family Neisseriaceae
Genus Pseudogulbenkiania
Species sp. NH8B
Peptidase View peptidase sequences from Pseudogulbenkiania sp. NH8B
Count of known and putative peptidases: 85, non-peptidase homologues 35
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0274498 lspA NH8B_0822
AD A24 A24.001 type 4 prepilin peptidase 1 MER0280505 pilD NH8B_3511
AD A24 unassigned subfamily A24A unassigned peptidases MER0427010 NH8B_2367
CL C82 unassigned subfamily C82A unassigned peptidases MER0461631 NH8B_0918
CL C82 unassigned subfamily C82A unassigned peptidases MER0461632 NH8B_0919
CL C82 unassigned subfamily C82A unassigned peptidases MER0461633 NH8B_1158
CL C82 unassigned subfamily C82A unassigned peptidases MER0463260 NH8B_1875
CO C40 unassigned family C40 unassigned peptidases MER0274496 NH8B_2644
CO C40 unassigned family C40 unassigned peptidases MER0274514 NH8B_3068
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0274433 NH8B_1038
MA M3 M03.004 oligopeptidase A MER0274435 NH8B_3663
MA M11 unassigned family M11 unassigned peptidases MER0274426 NH8B_3131
MA M11 unassigned family M11 unassigned peptidases MER0274414 NH8B_3134
MA M32 M32.003 TcMCP1 carboxypeptidase MER0274421 NH8B_1104
MA M41 M41.001 FtsH peptidase MER0274464 ftsH NH8B_3492
MA M41 unassigned family M41 unassigned peptidases MER0274522 ftsH NH8B_2300
MA M48 M48.002 HtpX peptidase MER0274459 htpX NH8B_2157
MA M48 M48.022 low osmolarity induced peptidase MER0274446 NH8B_0190
MA M48 unassigned subfamily M48A unassigned peptidases MER0274491 NH8B_2335
MA M48 unassigned subfamily M48B unassigned peptidases MER0274465 htpX NH8B_0286
MA M48 unassigned subfamily M48C unassigned peptidases MER0274443 NH8B_3881
MA M48 unassigned subfamily M48C unassigned peptidases MER0274416 NH8B_4025
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0274422 NH8B_1037
MA M90 unassigned family M90 unassigned peptidases MER0226550 NH8B_2572
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0274445 NH8B_1318
MD M15 unassigned subfamily M15C unassigned peptidases MER0274492 NH8B_1117
ME M16 M16.019 YMXG peptidase MER0274484 NH8B_0336
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0274487 NH8B_0337
ME M16 unassigned subfamily M16B unassigned peptidases MER0274486 NH8B_0337
MF M17 M17.003 PepA aminopeptidase MER0274456 pepA NH8B_1725
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0274425 map NH8B_2590
MG M24 M24.004 aminopeptidase P (bacteria) MER0274477 NH8B_1209
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0274466 NH8B_1341
MG M24 unassigned subfamily M24B unassigned peptidases MER0274485 NH8B_4108
MH M20 unassigned subfamily M20A unassigned peptidases MER0274418 argE NH8B_2439
MH M20 unassigned subfamily M20A unassigned peptidases MER0274410 dapE NH8B_2858
MH M20 unassigned subfamily M20C unassigned peptidases MER0274437 NH8B_2576
MH M20 unassigned family M20D unassigned peptidases MER0371691 NH8B_1518
MH M20 unassigned family M20D unassigned peptidases MER0371662 NH8B_1985
MH M20 unassigned family M20D unassigned peptidases MER0372770 NH8B_2042
MJ M19 M19.950 Mername-AA306 protein MER0274451 NH8B_1384
MJ M38 M38.982 urease MER0274430 ureA NH8B_2034
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0274478 mtaD NH8B_0937
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0274482 NH8B_3855
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0274509 hutI NH8B_4083
MO M23 M23.009 Mername-AA292 peptidase MER0274493 NH8B_2249
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0274439 NH8B_0665
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0274454 NH8B_3351
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0274510 NH8B_1745
MU M103 M103.UNW family M103 non-peptidase homologues MER0274511 NH8B_2624
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0274419 flhB NH8B_2910
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0274504 flhB NH8B_3272
PA S1 S01.260 B1598 peptidase MER0274523 NH8B_0519
PA S1 unassigned subfamily S1C unassigned peptidases MER0274458 NH8B_1575
PA S1 unassigned subfamily S1C unassigned peptidases MER0274481 NH8B_3004
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0274417 NH8B_2637
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0274448 gltB NH8B_3565
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458423 NH8B_2360
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0274436 glmS NH8B_3784
PB T1 T01.006 HslV component of HslUV peptidase MER0274515 hslV NH8B_3966
PB T2 unassigned family T2 unassigned peptidases MER0274517 NH8B_2671
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0274462 NH8B_0069
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0274428 trpG NH8B_1935
PC C26 C26.957 GMP synthase MER0274438 guaA NH8B_0924
PC C26 C26.961 PuuD protein MER0274453 guaA NH8B_0526
PC C26 C26.964 CTP synthetase MER0447675 pyrG NH8B_0933
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444902 hisH NH8B_3830
PC C26 C26.A28 SPBPB2B2.05 (Schizosaccharomyces pombe) MER0274476 NH8B_2309
PC C26 unassigned family C26 unassigned peptidases MER0274524 guaA NH8B_0324
PC C26 unassigned family C26 unassigned peptidases MER0274521 guaA NH8B_1852
PC C26 unassigned family C26 unassigned peptidases MER0274412 NH8B_2786
PC C26 unassigned family C26 unassigned peptidases MER0274519 carA NH8B_3499
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0274525 purL NH8B_1928
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0274432 NH8B_2236
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0274490 NH8B_0729
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385986 NH8B_0871
PE T5 T05.001 ornithine acetyltransferase precursor MER0274429 argJ NH8B_3932
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0274413 NH8B_2192
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0274512 NH8B_1368
SC S9 unassigned subfamily S9A unassigned peptidases MER0274409 NH8B_0198
SC S33 S33.001 prolyl aminopeptidase MER0274461 NH8B_3907
SC S33 unassigned family S33 unassigned peptidases MER0274447 NH8B_1372
SC S33 unassigned family S33 unassigned peptidases MER0274479 NH8B_1541
SC S33 unassigned family S33 unassigned peptidases MER0274516 NH8B_2496
SC S33 unassigned family S33 unassigned peptidases MER0274452 NH8B_2547
SE S11 S11.002 murein-DD-endopeptidase MER0274494 NH8B_1185
SE S11 unassigned family S11 unassigned peptidases MER0274450 NH8B_1695
SE S12 unassigned family S12 unassigned peptidases MER0274513 NH8B_2756
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0274495 NH8B_3399
SF S24 S24.003 UmuD protein MER0274463 NH8B_1458
SF S24 S24.003 UmuD protein MER0274480 NH8B_2099
SF S24 S24.003 UmuD protein MER0274520 NH8B_1799
SF S24 unassigned family S24 unassigned peptidases MER0274460 NH8B_0575
SF S24 unassigned family S24 unassigned peptidases MER0274440 NH8B_0968
SF S24 unassigned family S24 unassigned peptidases MER0274441 NH8B_2072
SF S26 S26.001 signal peptidase I MER0274411 NH8B_1578
SJ S16 S16.001 Lon-A peptidase MER0274518 lon NH8B_2601
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0274505 radA NH8B_3074
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0274489 NH8B_3525
SJ S16 unassigned family S16 unassigned peptidases MER0274499 NH8B_0112
SJ S16 unassigned family S16 unassigned peptidases MER0274420 lon NH8B_2764
SK S14 S14.001 peptidase Clp (type 1) MER0274449 clpP NH8B_2603
SK S14 unassigned family S14 unassigned peptidases MER0491363 clpP NH8B_1224
SK S41 unassigned subfamily S41A unassigned peptidases MER0274423 NH8B_3352
SK S49 S49.003 protein C (bacteriophage lambda) MER0274434 NH8B_0558
U- U32 U32.002 collagenase (Helicobacter-type) MER0274457 NH8B_1482
U- U32 U32.003 collagenase (Salmonella-type) MER0274468 NH8B_4057
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0274427 NH8B_3607
U- U32 unassigned family U32 unassigned peptidases MER0274483 NH8B_3606
U- U69 unassigned family U69 unassigned peptidases MER0274500 NH8B_2667
U- U69 unassigned family U69 unassigned peptidases MER0274501 NH8B_2667
U- U69 unassigned family U69 unassigned peptidases MER0274502 NH8B_2667
U- U69 unassigned family U69 unassigned peptidases MER0274506 NH8B_3054
U- U69 unassigned family U69 unassigned peptidases MER0274508 NH8B_3054
U- U69 unassigned family U69 unassigned peptidases MER0274415 NH8B_3134
U- U69 unassigned family U69 unassigned peptidases MER0274469 NH8B_3817
U- U69 unassigned family U69 unassigned peptidases MER0274471 NH8B_3817
U- U69 unassigned family U69 unassigned peptidases MER0274472 NH8B_3817
U- U69 unassigned family U69 unassigned peptidases MER0274473 NH8B_3817
U- U69 unassigned family U69 unassigned peptidases MER0274474 NH8B_3817

GENOME ANALYSIS: Comparison with 23 completely sequenced genomes from family Neisseriaceae
Family Comment
C26 lineage specific expansion (10 homologues)
C56 lineage specific expansion (4 homologues)
C82 lineage specific expansion (4 homologues)
M11 significant presence (2 homologues)
M15 significant presence (1 homologues)
M16 significant presence (3 homologues)
M19 significant presence (1 homologues)
M20 lineage specific expansion (6 homologues)
M23 significant decrease in homologues (3 homologues)
M24 lineage specific expansion (4 homologues)
M32 significant presence (1 homologues)
M38 significant presence (4 homologues)
M48 lineage specific expansion (6 homologues)
M90 significant presence (1 homologues)
N6 significant presence (2 homologues)
S8 significant presence (1 homologues)
S12 significant presence (1 homologues)
T1 significant presence (1 homologues)
T2 significant presence (1 homologues)
U32 lineage specific expansion (4 homologues)
U69 significant presence (11 homologues)

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