Pseudomonas sp. S9
| Taxonomy | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Taxonomy database identifier: 686578 | |||||||||
| Superkingdom | Bacteria | ||||||||
| Phylum | Proteobacteria | ||||||||
| Class | Gammaproteobacteria | ||||||||
| Order | Pseudomonadales | ||||||||
| Family | Pseudomonadaceae | ||||||||
| Genus | Pseudomonas | ||||||||
| Species | sp. S9 | ||||||||
| Peptidase | View peptidase sequences from Pseudomonas sp. S9 | ||||||||
| Count of known and putative peptidases: 46, non-peptidase homologues 11 | |||||||||
| Completely sequences genomes from subspecies and strains | Protein coding genes | ||||||||
To show all strains with completely sequenced genomes, click here. | |||||||||
| Clan | Family | MEROPS ID | Peptidase or homologue (subtype) | MERNUM | Gene | Link | Locus | Megabases |
|---|---|---|---|---|---|---|---|---|
| AA | A32 | unassigned | family A32 unassigned peptidases | MER0233051 | ||||
| AA | A32 | unassigned | family A32 unassigned peptidases | MER0234498 | ||||
| AC | A8 | unassigned | family A8 unassigned peptidases | MER0324529 | ||||
| AD | A24 | A24.001 | type 4 prepilin peptidase 1 | MER0259723 | ||||
| CA | C39 | unassigned | family C39 unassigned peptidases | MER0446051 | ||||
| CA | C39 | unassigned | family C39 unassigned peptidases | MER0445933 | ||||
| CA | C93 | unassigned | family C93 unassigned peptidases | MER0392998 | PseS9_01155 | |||
| CL | C82 | C82.A01 | LdtF protein (Escherichia coli) | MER0462742 | PseS9_04729 | |||
| CL | C82 | unassigned | subfamily C82A unassigned peptidases | MER0464011 | ||||
| CL | C82 | unassigned | subfamily C82A unassigned peptidases | MER0464012 | ||||
| CO | C40 | C40.006 | PgpA peptidase | MER0377431 | ||||
| CO | C40 | C40.006 | PgpA peptidase | MER0452488 | ||||
| CO | C40 | unassigned | family C40 unassigned peptidases | MER0452696 | ||||
| MA | M1 | M01.005 | alanyl aminopeptidase (bacterial-type) | MER0335532 | pepN | |||
| MA | M3 | M03.004 | oligopeptidase A | MER0336144 | ||||
| MA | M41 | M41.001 | FtsH peptidase | MER0300685 | ||||
| MA | M48 | M48.002 | HtpX peptidase | MER0296198 | ||||
| MA | M90 | unassigned | family M90 unassigned peptidases | MER0227882 | ||||
| MC | M14 | non-peptidase homologue | subfamily M14D non-peptidase homologues | MER0309111 | ||||
| ME | M16 | M16.019 | YMXG peptidase | MER0390523 | ||||
| ME | M16 | non-peptidase homologue | subfamily M16B non-peptidase homologues | MER0470882 | PseS9_18509 | |||
| ME | M16 | non-peptidase homologue | family M16 non-peptidase homologues | MER0392950 | ||||
| MF | M17 | M17.003 | PepA aminopeptidase | MER0289646 | ||||
| MG | M24 | M24.001 | methionyl aminopeptidase 1 (Escherichia-type) | MER0318885 | ||||
| MG | M24 | M24.004 | aminopeptidase P (bacteria) | MER0319221 | ||||
| MG | M24 | non-peptidase homologue | family M24 non-peptidase homologues | MER0396746 | ||||
| MH | M18 | unassigned | family M18 unassigned peptidases | MER0289857 | ||||
| MH | M20 | unassigned | family M20D unassigned peptidases | MER0372377 | ||||
| MH | M20 | unassigned | family M20D unassigned peptidases | MER0373163 | ||||
| MH | M20 | unassigned | family M20 unassigned peptidases | MER0369638 | ||||
| MH | M42 | unassigned | family M42 unassigned peptidases | MER0364731 | ||||
| MJ | M19 | M19.950 | Mername-AA306 protein | MER0341499 | ||||
| MO | M23 | M23.009 | Mername-AA292 peptidase | MER0314542 | ||||
| MO | M23 | non-peptidase homologue | subfamily M23B non-peptidase homologues | MER0389578 | ||||
| MO | M23 | non-peptidase homologue | subfamily M23B non-peptidase homologues | MER0479372 | ||||
| MO | M23 | unassigned | subfamily M23B unassigned peptidases | MER0387989 | ||||
| MO | M23 | unassigned | subfamily M23B unassigned peptidases | MER0388254 | ||||
| MO | M23 | unassigned | subfamily M23B unassigned peptidases | MER0387832 | ||||
| MU | M103 | M103.001 | TldD peptidase (Escherichia coli) | MER0332549 | ||||
| MU | M103 | M103.UNW | family M103 non-peptidase homologues | MER0239605 | ||||
| NB | N6 | N06.A01 | FlhB protein (Escherichia coli) | MER0327353 | ||||
| PA | S1 | S01.453 | MucD peptidase | MER0407253 | ||||
| PA | S1 | S01.477 | AlgW peptidase | MER0408584 | ||||
| PB | C44 | C44.001 | amidophosphoribosyltransferase precursor | MER0454832 | ||||
| PB | S45 | S45.003 | cephalosporin C acylase precursor | MER0312171 | ||||
| PB | T1 | T01.006 | HslV component of HslUV peptidase | MER0323614 | ||||
| PB | T3 | T03.001 | gamma-glutamyltransferase 1 (bacterial-type) | MER0378828 | ||||
| PB | T3 | unassigned | family T3 unassigned peptidases | MER0380010 | ||||
| PC | C26 | C26.955 | aminodeoxychorismate synthase, subunit II | MER0436628 | ||||
| PC | C26 | C26.961 | PuuD protein | MER0448357 | ||||
| PC | C26 | C26.964 | CTP synthetase | MER0447285 | pyrG | |||
| PC | C26 | C26.965 | imidazole glycerol phosphate synthase subunit HisH | MER0445016 | hisH | |||
| PC | C26 | unassigned | family C26 unassigned peptidases | MER0446725 | ||||
| PC | C26 | unassigned | family C26 unassigned peptidases | MER0443686 | guaA | |||
| PC | C26 | unassigned | family C26 unassigned peptidases | MER0441356 | ||||
| PC | C56 | C56.A06 | DDB_G0276405 (Dictyostelium discoideum) | MER0385150 | ||||
| PC | C56 | non-peptidase homologue | family C56 non-peptidase homologues | MER0385954 | ||||
| PE | P1 | P01.001 | DmpA aminopeptidase | MER0316820 | ||||
| PE | T5 | T05.001 | ornithine acetyltransferase precursor | MER0307692 | ||||
| SC | S9 | S09.010 | oligopeptidase B | MER0490871 | ||||
| SC | S33 | S33.001 | prolyl aminopeptidase | MER0307804 | ||||
| SE | S11 | S11.002 | murein-DD-endopeptidase | MER0352517 | pbpG | |||
| SE | S11 | unassigned | family S11 unassigned peptidases | MER0350775 | ||||
| SE | S12 | S12.006 | class C beta-lactamase | MER0355833 | ampC | |||
| SE | S12 | unassigned | family S12 unassigned peptidases | MER0354687 | ||||
| SE | S12 | unassigned | family S12 unassigned peptidases | MER0355752 | ||||
| SE | S13 | S13.003 | D-Ala-D-Ala carboxypeptidase PBP3 | MER0298618 | ||||
| SF | S24 | S24.001 | repressor LexA | MER0304405 | ||||
| SF | S24 | S24.003 | UmuD protein | MER0375486 | ||||
| SF | S24 | S24.004 | RvuZ homologue protein (Rattus) | MER0375747 | ||||
| SF | S26 | S26.001 | signal peptidase I | MER0265718 | ||||
| SJ | S16 | S16.001 | Lon-A peptidase | MER0299755 | ||||
| SJ | S16 | unassigned | family S16 unassigned peptidases | MER0361181 | ||||
| SK | S14 | S14.001 | peptidase Clp (type 1) | MER0299177 | ||||
| SK | S41 | S41.001 | C-terminal processing peptidase-1 | MER0288544 | ||||
| SK | S41 | S41.004 | C-terminal processing peptidase-3 | MER0337776 | ||||
| SK | S49 | unassigned | subfamily S49B unassigned peptidases | MER0321532 | ||||
| U- | U32 | unassigned | family U32 unassigned peptidases | MER0404191 |
| GENOME ANALYSIS: Comparison with 101 completely sequenced genomes from genus Pseudomonas | |
|---|---|
| Family | Comment |
| A8 | significant presence (1 homologues) |
| A24 | significant presence (1 homologues) |
| A32 | significant presence (2 homologues) |
| C26 | significant presence (7 homologues) |
| C39 | significant presence (2 homologues) |
| C40 | significant presence (3 homologues) |
| C44 | significant presence (1 homologues) |
| C56 | significant presence (2 homologues) |
| C82 | significant presence (3 homologues) |
| C93 | significant presence (1 homologues) |
| M1 | significant presence (1 homologues) |
| M3 | significant presence (1 homologues) |
| M103 | significant presence (2 homologues) |
| M14 | significant presence (1 homologues) |
| M16 | significant presence (3 homologues) |
| M17 | significant presence (1 homologues) |
| M18 | significant presence (1 homologues) |
| M19 | significant presence (1 homologues) |
| M20 | significant presence (3 homologues) |
| M23 | significant presence (6 homologues) |
| M24 | significant presence (3 homologues) |
| M41 | significant presence (1 homologues) |
| M42 | significant presence (1 homologues) |
| M48 | significant presence (1 homologues) |
| M90 | significant presence (1 homologues) |
| N6 | significant presence (1 homologues) |
| P1 | significant presence (1 homologues) |
| S1 | significant presence (2 homologues) |
| S9 | significant presence (1 homologues) |
| S11 | significant presence (2 homologues) |
| S12 | significant presence (3 homologues) |
| S13 | significant presence (1 homologues) |
| S14 | significant presence (1 homologues) |
| S16 | significant presence (2 homologues) |
| S24 | significant presence (3 homologues) |
| S26 | significant presence (1 homologues) |
| S33 | significant presence (1 homologues) |
| S41 | significant presence (2 homologues) |
| S45 | significant presence (1 homologues) |
| S49 | significant presence (1 homologues) |
| T1 | significant presence (1 homologues) |
| T3 | significant presence (2 homologues) |
| T5 | significant presence (1 homologues) |
| U32 | significant presence (1 homologues) |
