Rhizobium sp. PDO1-076

Taxonomy
Taxonomy database identifier: 1125979
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Rhizobiaceae
Genus Rhizobium
Species sp. PDO-076
Peptidase View peptidase sequences from Rhizobium sp. PDO1-076
Count of known and putative peptidases: 58, non-peptidase homologues 11
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A32 unassigned family A32 unassigned peptidases MER0233058 PDO_0037
AA A32 unassigned family A32 unassigned peptidases MER0233529 PDO_4326
AC A8 unassigned family A8 unassigned peptidases MER0324565 lspA PDO_0195
AD A24 unassigned subfamily A24A unassigned peptidases MER0426899 PDO_0045
AF A26 unassigned family A26 unassigned peptidases MER0224651
CA C93 unassigned family C93 unassigned peptidases MER0152774 PDO_4249
CL C82 C82.003 ykuD transpeptidase MER0462998 PDO_2134
CL C82 C82.003 ykuD transpeptidase MER0462999 PDO_4820
CL C82 C82.003 ykuD transpeptidase MER0463000 PDO_1327
CL C82 C82.003 ykuD transpeptidase MER0463001 PDO_1328
CL C82 C82.003 ykuD transpeptidase MER0463002 PDO_4232
CL C82 C82.003 ykuD transpeptidase MER0461228 PDO_4233
CL C82 C82.003 ykuD transpeptidase MER0463003 PDO_4102
CL C82 unassigned subfamily C82A unassigned peptidases MER0321916 PDO_3119
CL C82 unassigned subfamily C82A unassigned peptidases MER0461226 PDO_2382
CL C82 unassigned subfamily C82A unassigned peptidases MER0461227 PDO_1594
CL C82 unassigned subfamily C82A unassigned peptidases MER0321933 PDO_1301
CL C82 unassigned subfamily C82A unassigned peptidases MER0738580 PDO_1661
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0305325 PDO_0010
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0294953
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335298 PDO_2118
MA M3 unassigned subfamily M3A unassigned peptidases MER0342260 PDO_2684
MA M3 unassigned subfamily M3B unassigned peptidases MER0342547 PDO_0539
MA M13 unassigned family M13 unassigned peptidases MER0338947 PDO_3114
MA M41 M41.001 FtsH peptidase MER0300792 ftsH PDO_3627
MA M48 unassigned subfamily M48B unassigned peptidases MER0296316 htpX PDO_0349
MD M15 non-peptidase homologue subfamily M15B non-peptidase homologues MER0924240 PDO_5225
MD M74 unassigned family M74 unassigned peptidases MER0313098 PDO_0064
ME M16 unassigned subfamily M16B unassigned peptidases MER0315556 PDO_3400
MF M17 unassigned family M17 unassigned peptidases MER0339771 pepA PDO_0834
MF M17 unassigned family M17 unassigned peptidases MER0340398 PDO_0012
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0394056 map PDO_3095
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0396793 PDO_1167
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0483043 PDO_0711
MG M24 unassigned subfamily M24A unassigned peptidases MER0395397 map PDO_2082
MG M24 unassigned subfamily M24B unassigned peptidases MER0481500 PDO_1842
MG M24 unassigned subfamily M24B unassigned peptidases MER0396461 PDO_5106
MH M20 M20.003 peptidase T MER0370776 PDO_1703
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374942 PDO_3336
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474696 PDO_5062
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0847211 PDO_2533
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0842638 PDO_2843
MH M20 unassigned subfamily M20A unassigned peptidases MER0369913 dapE PDO_0589
MH M20 unassigned subfamily M20A unassigned peptidases MER0846268 PDO_3023
MH M20 unassigned subfamily M20B unassigned peptidases MER0369555 PDO_3451
MH M20 unassigned family M20D unassigned peptidases MER0474614 PDO_2032
MH M20 unassigned family M20D unassigned peptidases MER0372919 PDO_1814
MH M20 unassigned family M20D unassigned peptidases MER0371644 PDO_1590
MH M20 unassigned family M20D unassigned peptidases MER0472866
MH M20 unassigned family M20 unassigned peptidases MER0373938 PDO_5094
MH M20 unassigned family M20 unassigned peptidases MER0849045 PDO_0088
MH M20 unassigned family M20 unassigned peptidases MER0748648 PDO_2403
MJ M19 unassigned family M19 unassigned peptidases MER0290526 PDO_3271
MJ M19 unassigned family M19 unassigned peptidases MER0341483 PDO_2721
MJ M38 M38.982 urease MER0862345 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874579 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874636 PDO_2265
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863558 PDO_3432
MM M50 unassigned subfamily M50B unassigned peptidases MER0891604 PDO_2214
MO M23 M23.009 Mername-AA292 peptidase MER0387903 PDO_3301
MO M23 M23.011 YebA peptidase MER0314380 PDO_4829
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389428 PDO_3513
MQ M29 M29.001 aminopeptidase T MER0294027 PDO_2600
MS M75 M75.001 imelysin MER0313162 PDO_2588
MT M81 unassigned family M81 unassigned peptidases MER0317520 PDO_1948
MT M81 unassigned family M81 unassigned peptidases MER0317465 PDO_1954
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0332573 PDO_2557
MU M103 M103.UNW family M103 non-peptidase homologues MER0245469 PDO_1023
NB N6 N06.001 YscU protein MER0326829
PA S1 unassigned subfamily S1B unassigned peptidases MER0966082 PDO_3737
PA S1 unassigned subfamily S1C unassigned peptidases MER0327646 PDO_1248
PA S1 unassigned subfamily S1C unassigned peptidases MER0327681 PDO_4015
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0455328 PDO_2630
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0457601 PDO_0561
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455329 glmS PDO_1538
PB C45 unassigned family C45 unassigned peptidases MER0305979 PDO_4803
PB T1 T01.006 HslV component of HslUV peptidase MER0323704 hslV PDO_0410
PB T2 unassigned family T2 unassigned peptidases MER1096507 PDO_3596
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0379849 PDO_3003
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0439123 PDO_2499
PC C26 C26.957 GMP synthase MER0443460 guaA PDO_2595
PC C26 C26.964 CTP synthetase MER0450900 pyrG PDO_3984
PC C26 unassigned family C26 unassigned peptidases MER0440443 carA PDO_0762
PC C26 unassigned family C26 unassigned peptidases MER0449347 PDO_3412
PC C26 unassigned family C26 unassigned peptidases MER0450392 PDO_2677
PC C26 unassigned family C26 unassigned peptidases MER0446159 hisH PDO_0408
PC C26 unassigned family C26 unassigned peptidases MER0451203 PDO_0004
PC C56 C56.001 PfpI peptidase MER0310847 PDO_3946
PE T5 T05.001 ornithine acetyltransferase precursor MER0307747 argJ PDO_3714
SB S8 unassigned subfamily S8A unassigned peptidases MER0987045 PDO_1993
SC S9 S09.010 oligopeptidase B MER0489176 PDO_2341
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0999410 PDO_1193
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022113 PDO_2157
SC S33 S33.001 prolyl aminopeptidase MER0307886 PDO_2639
SC S33 unassigned family S33 unassigned peptidases MER0381905 PDO_5049
SC S33 unassigned family S33 unassigned peptidases MER0381354 PDO_4212
SE S11 S11.A01 penP g.p. (Bacillus subtilis) MER0948620 PDO_2030
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0351422 PDO_2965
SE S11 unassigned family S11 unassigned peptidases MER0351504 PDO_2787
SE S11 unassigned family S11 unassigned peptidases MER0351374 PDO_2560
SE S11 unassigned family S11 unassigned peptidases MER0352060 PDO_1591
SE S11 unassigned family S11 unassigned peptidases MER0351973 PDO_3811
SE S11 unassigned family S11 unassigned peptidases MER0976046 PDO_3776
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421413 PDO_3738
SE S12 unassigned family S12 unassigned peptidases MER0421412 PDO_2715
SE S12 unassigned family S12 unassigned peptidases MER0355885 PDO_1581
SF S24 S24.001 repressor LexA MER0375876 lexA PDO_4572
SF S24 unassigned family S24 unassigned peptidases MER1045124 PDO_0658
SF S26 S26.001 signal peptidase I MER0266043 PDO_1445
SF S26 S26.014 TraF peptidase MER0270063 PDO_1158
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0322895
SJ S16 S16.001 Lon-A peptidase MER0299830 lon PDO_2819
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1037351 PDO_2628
SK S14 S14.001 peptidase Clp (type 1) MER0299291 clpP PDO_2821
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0491172 PDO_1135
SK S14 unassigned family S14 unassigned peptidases MER0359550 clpP PDO_2516
SK S41 S41.004 C-terminal processing peptidase-3 MER0337744 PDO_0235
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1072355 PDO_1135
SK S49 unassigned subfamily S49B unassigned peptidases MER1070699 PDO_1057
ST S54 unassigned family S54 unassigned peptidases MER1081203 PDO_3815
ST S54 unassigned family S54 unassigned peptidases MER1079684 PDO_5081