Flavobacterium indicum

Taxonomy
Taxonomy database identifier: 312277
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Flavobacterium
Species indicum
Peptidase View peptidase sequences from Flavobacterium indicum
Count of known and putative peptidases: 58, non-peptidase homologues 38
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0152112 lspA KQS_00750
CA C39 C39.001 bacteriocin-processing peptidase MER0152115 KQS_01000
CA C39 C39.001 bacteriocin-processing peptidase MER0152631 KQS_07740
CD C25 unassigned family C25 unassigned peptidases MER0152337 porU KQS_03175
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0152535 KQS_06195
CO C40 unassigned family C40 unassigned peptidases MER0152691 KQS_10240
G- G5 unassigned family G5 unassigned peptidases MER0939292 KQS_01325
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0345788 KQS_02035
MA M1 unassigned family M1 unassigned peptidases MER0151902 KQS_00145
MA M1 unassigned family M1 unassigned peptidases MER0152110 KQS_00475
MA M1 unassigned family M1 unassigned peptidases MER0152493 KQS_05355
MA M1 unassigned family M1 unassigned peptidases MER0152504 KQS_05520
MA M1 unassigned family M1 unassigned peptidases MER0153406 KQS_11720
MA M3 unassigned subfamily M3A unassigned peptidases MER0152266 dcp1 KQS_02665
MA M4 unassigned family M4 unassigned peptidases MER0152226 KQS_02660
MA M13 unassigned family M13 unassigned peptidases MER0152109 pepO KQS_00300
MA M36 unassigned family M36 unassigned peptidases MER0153692 KQS_12070
MA M41 M41.A17 DDB_G0284249 g.p. (Dictyostelium discoideum) MER0152685 ftsH KQS_10080
MA M43 M43.007 ulilysin (Methanosarcina acetivorans) MER0152602 KQS_06625
MA M43 unassigned subfamily M43B unassigned peptidases MER0152649 KQS_08310
MA M43 unassigned subfamily M43B unassigned peptidases MER0153821 fpp2 KQS_12200
MA M48 unassigned subfamily M48C unassigned peptidases MER0886625 KQS_00160
MA M54 unassigned family M54 unassigned peptidases MER0152609 KQS_06855
MA M56 unassigned family M56 unassigned peptidases MER0935179 KQS_08785
MA M61 unassigned family M61 unassigned peptidases MER0152692 KQS_10510
MA M90 unassigned family M90 unassigned peptidases MER0906426 KQS_11520
MC M14 non-peptidase homologue subfamily M14B non-peptidase homologues MER0469092 KQS_06745
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0835505 KQS_06360
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0469292 KQS_00765
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0152133 KQS_02170
ME M16 unassigned subfamily M16B unassigned peptidases MER0152132 KQS_02165
MG M24 unassigned subfamily M24A unassigned peptidases MER0153473 map KQS_11840
MG M24 unassigned subfamily M24B unassigned peptidases MER0154534 pepP KQS_13435
MH M20 M20.003 peptidase T MER0152442 pepT KQS_03935
MH M20 unassigned subfamily M20C unassigned peptidases MER0152495 pepD KQS_05425
MH M20 unassigned subfamily M20F unassigned peptidases MER0152114 KQS_00975
MH M28 unassigned subfamily M28B unassigned peptidases MER0152763 KQS_10885
MH M28 unassigned subfamily M28F unassigned peptidases MER0152505 KQS_05660
MH M28 unassigned family M28 unassigned peptidases MER0212220 KQS_03200
MH M42 unassigned family M42 unassigned peptidases MER0152431 KQS_03860
MJ M38 M38.978 dihydropyrimidinase related protein-5 MER0862549 KQS_05215
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0154533 pyrC1 KQS_13180
MJ M38 unassigned family M38 unassigned peptidases MER0152469 hutI KQS_04170
MM M50 unassigned family M50 unassigned peptidases MER0152111 KQS_00480
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0154549 KQS_13630
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0154467 KQS_12715
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0155041 KQS_13910
MO M23 unassigned subfamily M23B unassigned peptidases MER0152679 KQS_09295
MO M23 unassigned subfamily M23B unassigned peptidases MER0153161 KQS_11080
MO M23 unassigned subfamily M23B unassigned peptidases MER0153630 KQS_11975
PA S1 unassigned subfamily S1C unassigned peptidases MER0152689 degP/Q KQS_10215
PA S1 unassigned subfamily S1C unassigned peptidases MER0153472 KQS_11750
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0152303 KQS_02710
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0153631 KQS_12010
PB C44 C44.976 AsnB protein MER0152190 KQS_02260
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0152409 asnB KQS_03410
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0152672 KQS_09230
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0153966 glmS KQS_12575
PB C44 unassigned family C44 unassigned peptidases MER0455716 purF KQS_13485
PB T2 unassigned family T2 unassigned peptidases MER0152191 KQS_02300
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0152628 pabA KQS_07280
PC C26 C26.957 GMP synthase MER0152597 guaA KQS_06495
PC C26 C26.964 CTP synthetase MER0450058 pyrG KQS_06515
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0152616 hisH KQS_06970
PC C26 unassigned family C26 unassigned peptidases MER0152336 carA KQS_02950
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0152684 purL KQS_09895
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0153405 pepE KQS_11705
SB S8 unassigned subfamily S8A unassigned peptidases MER0152104 KQS_00150
SB S8 unassigned subfamily S8A unassigned peptidases MER0152598 KQS_06540
SC S9 S09.010 oligopeptidase B MER0153117 ptrB KQS_10895
SC S9 S09.017 prolyl tripeptidyl peptidase MER0152443 pepX2 KQS_04155
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0404995 pop KQS_12370
SC S9 S09.946 BSU33620 g.p. (Bacillus subtilis) and similar MER0154548 KQS_13440
SC S9 S09.A96 DDB_G0281415 g.p. (Dictyostelium discoideum) MER0152657 KQS_08840
SC S9 unassigned subfamily S9A unassigned peptidases MER0152116 pepX1 KQS_01510
SC S9 unassigned subfamily S9A unassigned peptidases MER0153964 KQS_12420
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0152120 KQS_01935
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0152209 metX KQS_02425
SC S33 unassigned family S33 unassigned peptidases MER0152492 KQS_05335
SC S33 unassigned family S33 unassigned peptidases MER0152681 KQS_09575
SC S33 unassigned family S33 unassigned peptidases MER0153169 pcbD KQS_11600
SE S12 S12.A03 EcHS_A2566 protein (Escherichia coli) MER0152624 KQS_07120
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0152107 KQS_00270
SE S12 unassigned family S12 unassigned peptidases MER0152117 KQS_01545
SE S12 unassigned family S12 unassigned peptidases MER0152422 KQS_03680
SE S12 unassigned family S12 unassigned peptidases MER0152489 KQS_05200
SE S12 unassigned family S12 unassigned peptidases MER0152594 KQS_06260
SF S24 S24.003 UmuD protein MER0152106 umuD KQS_00255
SF S26 unassigned subfamily S26A unassigned peptidases MER0152708 lepB KQS_10575
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0154458 radA KQS_12610
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0152600 KQS_06570
SJ S16 unassigned family S16 unassigned peptidases MER0152491 lon KQS_05285
SK S14 S14.001 peptidase Clp (type 1) MER0152121 clpP KQS_01960
SK S41 S41.001 C-terminal processing peptidase-1 MER0152140 KQS_02210
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1059142 KQS_05720
SK S41 unassigned subfamily S41A unassigned peptidases MER1347854
SK S41 unassigned subfamily S41A unassigned peptidases MER0151674 prc KQS_00135
SK S41 unassigned subfamily S41A unassigned peptidases MER0153744 KQS_12120
SK S49 S49.001 signal peptide peptidase A (Pseudomonas aeruginosa) MER0153691 sppA KQS_12060
SS S66 unassigned family S66 unassigned peptidases MER0154512 KQS_12895
ST S54 S54.025 At5g25752 rhomboid peptidase MER0152667 KQS_09015
ST S54 unassigned family S54 unassigned peptidases MER1078797 KQS_02765
ST S54 unassigned family S54 unassigned peptidases MER1083471 KQS_10590
ST S54 unassigned family S54 unassigned peptidases MER0152710 KQS_10595
U- U32 U32.001 collagenase (Porphyromonas-type) MER0325456
U- U32 unassigned family U32 unassigned peptidases MER0404224 yceA KQS_13710

GENOME ANALYSIS: Comparison with 25 completely sequenced genomes from genus Flavobacterium
Family Comment
G4 significant presence (1 homologues)
G5 significant presence (1 homologues)
M28 significant decrease in homologues (3 homologues)
M54 significant presence (1 homologues)
M90 significant presence (1 homologues)
T2 significant presence (1 homologues)