Structure for peptidase M38.001: isoaspartyl dipeptidase (metallo-type)
 
PDB | Organism | Resolution | Comment |
---|---|---|---|
1ONW | Escherichia coli | 1.65 Å | mature |
One molecule of the homodimer is shown. The catalytic zinc ions are shown as light grey CPK spheres. The zinc ligands are shown in ball-and-stick representation: His68, His70, Lys162, His201 and His230 in purple. The catalytic Asp285 is shown in pink. | |||
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TERTIARY STRUCTURE DATA | ||||||||
---|---|---|---|---|---|---|---|---|
Comment | Resolution | PDB | PDBe | SCOP | CATH | PDBSum | Proteopedia | Reference |
Escherichia coli | ||||||||
mature peptidase | 1.65 Å | 1ONW | 1ONW | 1ONW | 1ONW | 1ONW | 1ONW | Thoden et al., 2003 |
complex with aspartate | 2.10 Å | 1ONX | 1ONX | 1ONX | 1ONX | 1ONX | 1ONX | Thoden et al., 2003 |
mature peptidase | 2.00 Å | 1PO9 | 1PO9 | 1PO9 | 1PO9 | 1PO9 | 1PO9 | Jozic et al., 2003 |
complex with inhibitor 2-[[(1S)-1-amino-2-carboxyethyl](dihydroxy)phosphoranyl]methyl-4-methylpentanoic acid | 3.30 Å | 1POJ | 1POJ | 1POJ | 1POJ | 1POJ | 1POJ | Jozic et al., 2003 |
mature peptidase | 2.70 Å | 1POK | 1POK | 1POK | 1POK | 1POK | 1POK | Jozic et al., 2003 |
Asp285Asn mutant; complex with beta-aspartylhistidine | 2.00 Å | 1YBQ | 1YBQ | 1YBQ | 1YBQ | 1YBQ | 1YBQ | Marti-Arbona et al., 2005 |
Glu77Glu mutant | 1.95 Å | 2AQO | 2AQO | 2AQO | 2AQO | 2AQO | 2AQO | Marti-Arbona et al., 2005 |
Tyr137Phe mutant | 1.95 Å | 2AQV | 2AQV | 2AQV | 2AQV | 2AQV | 2AQV | Marti-Arbona et al., 2005 |
three tetrameric rings of isoaspartyl dipeptidase fitted in an em volume. | 10.50 Å | 5LP3 | 5LP3 | 5LP3 | 5LP3 | 5LP3 | 5LP3 |