Structure for family M38 unassigned peptidases

Summary Sequences Sequence features Distribution Structure Literature Substrates

TERTIARY STRUCTURE DATA
Comment	Resolution	PDB	PDBe	SCOP	CATH	PDBSum	Proteopedia	Reference
Aeromonas hydrophila
mature peptidase	2.20 Å	2OOF	2OOF	2OOF	2OOF	2OOF	2OOF
mature peptidase	1.97 Å	2Q09	2Q09	2Q09	2Q09	2Q09	2Q09	Tyagi et al., 2008
Agrobacterium tumefaciens
mature peptidase	2.21 Å	3NQB	3NQB	3NQB	3NQB	3NQB	3NQB
mature peptidase	2.63 Å	3T81	3T81	3T81	3T81	3T81	3T81
mature peptidase	2.80 Å	3T8L	3T8L	3T8L	3T8L	3T8L	3T8L	Kamat et al., 2011
Aquifex aeolicus
mature peptidase	1.65 Å	1XRF	1XRF	1XRF	1XRF	1XRF	1XRF	Martin et al., 2005
mature peptidase	1.61 Å	1XRT	1XRT	1XRT	1XRT	1XRT	1XRT	Martin et al., 2005
activated by aspartate transcarbamoylase	2.30 Å	3D6N	3D6N	3D6N	3D6N	3D6N	3D6N	Zhang et al., 2009
mature peptidase	2.20 Å	4BJH	4BJH	4BJH	4BJH	4BJH	4BJH	Edwards et al., 2013
dihydroorotase from aquifex aeolicus under 1200 bar of hydrostatic pressure	2.60 Å	6GDD	6GDD	6GDD	6GDD	6GDD	6GDD
dihydroorotase from aquifex aeolicus standard (p,t)	2.45 Å	6GDE	6GDE	6GDE	6GDE	6GDE	6GDE
dihydroorotase from aquifex aeolicus under 600 bar of hydrostatic pressure	2.50 Å	6GDF	6GDF	6GDF	6GDF	6GDF	6GDF
Bacillus anthracis
mature peptidase	2.60 Å	3MPG	3MPG	3MPG	3MPG	3MPG	3MPG	Mehboob et al., 2010
dihydroorotase from bacillus anthracis with substrate bound	2.45 Å	4YIW	4YIW	4YIW	4YIW	4YIW	4YIW
Bacillus subtilis
structure of imidazolonepropionase from bacillus subtilis	2.00 Å	2BB0	2BB0	2BB0	2BB0	2BB0	2BB0
complex with imidazole-4-acetic acid sodium salt, a substrate homologue	2.00 Å	2G3F	2G3F	2G3F	2G3F	2G3F	2G3F
Bifidobacterium longum
crystal structure of putative prolidase from bifidobacterium longum	1.70 Å	2P9B	2P9B	2P9B	2P9B	2P9B	2P9B
Caulobacter crescentus
complex with n-methyl phosphonate derivative of l-arginine	1.70 Å	3MTW	3MTW	3MTW	3MTW	3MTW	3MTW
Colwellia psychrerythraea
isoaspartyl dipeptidase from colwellia psychrerythraea strain 34h *caveat 5xgw thr a 93 has planar configuration at atom cb thr a 223 has caveat 2 5xgw planar configuration at atom cb thr b 196 has planar **caveat 3 5xgw configuration at atom cb	1.85 Å	5XGW	5XGW	5XGW	5XGW	5XGW	5XGW
Glu80Glnq mutant; complex with beta-isoaspartyl lysine	2.33 Å	5XGX	5XGX	5XGX	5XGX	5XGX	5XGX
Thermotoga maritima
mature peptidase	2.50 Å	1O12	1O12	1O12	1O12	1O12	1O12
Thermus thermophilus
mature peptidase	2.42 Å	2Z00	2Z00	2Z00	2Z00	2Z00	2Z00