TERTIARY STRUCTURE DATA |
Bos taurus
|
meizothrombin desF1 |
3.20 Å |
1A0H |
1A0H |
1A0H |
1A0H |
1A0H |
1A0H |
Martin et al., 1997 |
complex with Triatoma pallidipennis inhibitor triabin |
2.60 Å |
1AVG |
1AVG |
1AVG |
1AVG |
1AVG |
1AVG |
Fuentes-Prior et al., 1997 |
complex with fibrinopeptide alpha |
2.30 Å |
1BBR |
1BBR |
1BBR |
1BBR |
1BBR |
1BBR |
Martin et al., 1992 |
epsilon-thrombin; non-covalent complex with MQPA |
2.20 Å |
1ETR |
1ETR |
1ETR |
1ETR |
1ETR |
1ETR |
Brandstetter et al., 1992 |
epsilon-thrombin; non-covalent complex with NAPAP |
2.30 Å |
1ETS |
1ETS |
1ETS |
1ETS |
1ETS |
1ETS |
Brandstetter et al., 1992 |
epsilon-thrombin; non-covalent complex with 4-TAPAP |
2.50 Å |
1ETT |
1ETT |
1ETT |
1ETT |
1ETT |
1ETT |
Brandstetter et al., 1992 |
alpha-thrombin; complex with hirudin variant 1 |
2.80 Å |
1HRT |
1HRT |
1HRT |
1HRT |
1HRT |
1HRT |
Vitali et al., 1992 |
complex with ecotin |
2.50 Å |
1ID5 |
1ID5 |
1ID5 |
1ID5 |
1ID5 |
1ID5 |
Wang et al., 2001 |
complex of alpha-thrombin and prethrombin-2 |
2.30 Å |
1MKW |
1MKW |
1MKW |
1MKW |
1MKW |
1MKW |
Malkowski et al., 1997 |
complex of alpha-thrombin and prethrombin-2 |
2.20 Å |
1MKX |
1MKX |
1MKX |
1MKX |
1MKX |
1MKX |
Malkowski et al., 1997 |
mature peptidase |
1.90 Å |
1NL1 |
1NL1 |
1NL1 |
1NL1 |
1NL1 |
1NL1 |
Huang et al., 2003 |
mature peptidase |
2.30 Å |
1NL2 |
1NL2 |
1NL2 |
1NL2 |
1NL2 |
1NL2 |
Huang et al., 2003 |
complex with rhodniin inhibitor |
3.10 Å |
1TBQ |
1TBQ |
1TBQ |
1TBQ |
1TBQ |
1TBQ |
van et al., 1995 |
complex with rhodniin inhibitor |
2.60 Å |
1TBR |
1TBR |
1TBR |
1TBR |
1TBR |
1TBR |
van et al., 1995 |
complex with ornithodorin |
3.10 Å |
1TOC |
1TOC |
1TOC |
1TOC |
1TOC |
1TOC |
van et al., 1996 |
complex with fibrinopeptide A alpha (residues 7-19) |
2.20 Å |
1UCY |
1UCY |
1UCY |
1UCY |
1UCY |
1UCY |
Martin et al., 1996 |
complex with BM14.1248 |
2.50 Å |
1UVT |
1UVT |
1UVT |
1UVT |
1UVT |
1UVT |
Engh et al., 1996 |
complex with BM12.1700 |
2.80 Å |
1UVU |
1UVU |
1UVU |
1UVU |
1UVU |
1UVU |
Engh et al., 1996 |
complex with hirudin 51-65 |
3.20 Å |
1VIT |
1VIT |
1VIT |
1VIT |
1VIT |
1VIT |
Vitali et al., 1996 |
complex with fibrinogen-AA peptide 1-23 (Phe8Tyr mutant) |
2.50 Å |
1YCP |
1YCP |
1YCP |
1YCP |
1YCP |
1YCP |
Malkowski et al., 1997 |
mature peptidase |
3.50 Å |
2A1D |
2A1D |
2A1D |
2A1D |
2A1D |
2A1D |
Friedrich et al., 2006 |
mature peptidase |
3.30 Å |
2HPP |
2HPP |
2HPP |
2HPP |
2HPP |
2HPP |
Arni et al., 1993 |
complex with boophilin |
2.35 Å |
2ODY |
2ODY |
2ODY |
2ODY |
2ODY |
2ODY |
Macedo-Ribeiro et al., 2008 |
prothrombin fragment 1 |
2.20 Å |
2PF1 |
2PF1 |
2PF1 |
2PF1 |
2PF1 |
2PF1 |
Seshadri et al., 1991 |
prothrombin fragment 1; complex with calcium |
2.20 Å |
2PF2 |
2PF2 |
2PF2 |
2PF2 |
2PF2 |
2PF2 |
Soriano-Garcia et al., 1992 |
prothrombin fragment 1; complex with strontium |
2.50 Å |
2SPT |
2SPT |
2SPT |
2SPT |
2SPT |
2SPT |
Seshadri et al., 1994 |
mature peptidase |
2.20 Å |
3PMA |
3PMA |
3PMA |
3PMA |
3PMA |
3PMA |
Desai et al., 2011 |
mature peptidase |
2.90 Å |
3PMB |
3PMB |
3PMB |
3PMB |
3PMB |
3PMB |
Desai et al., 2011 |
Homo sapiens
|
complex with aeruginosin 298A inhibitor |
2.10 Å |
1A2C |
1A2C |
1A2C |
1A2C |
1A2C |
1A2C |
|
complex with boronate form of hirudin II inhibitor |
1.80 Å |
1A3B |
1A3B |
1A3B |
1A3B |
1A3B |
1A3B |
Skordalakes et al., 1998 |
complex with boronate form of hirudin II inhibitor |
1.85 Å |
1A3E |
1A3E |
1A3E |
1A3E |
1A3E |
1A3E |
Skordalakes et al., 1998 |
complex with hirugen and (1S,7S)-7-amino-N-[(2R,3S)-7-amino-1-(cyclohexylamino)- 2-hydroxy-1-oxoheptan-3-yl]-7-benzyl-8-oxohexahydro- 1H-pyrazolo[1,2-a]pyridazine-1-carboxamide |
2.12 Å |
1A46 |
1A46 |
1A46 |
1A46 |
1A46 |
1A46 |
St et al., 1999 |
complex with hirudin I and a thiazole-containing inhibitor |
1.80 Å |
1A4W |
1A4W |
1A4W |
1A4W |
1A4W |
1A4W |
Matthews et al., 1996 |
complex with hirugen and (1S,7S)-7-amino-7-benzyl-N-[(1S)-4-carbamimidamido- 1-(1S)-1-hydroxy-2-oxo-2-[(2-phenylethyl)amino]ethylbutyl]- 8-oxohexahydro-1H-pyrazolo[1,2-a]pyridazine- 1-carboxamide |
2.06 Å |
1A5G |
1A5G |
1A5G |
1A5G |
1A5G |
1A5G |
St et al., 1999 |
complex with hirudin IIIB' inhibitor |
2.20 Å |
1A61 |
1A61 |
1A61 |
1A61 |
1A61 |
1A61 |
St et al., 1999 |
complex with hirulog 3 |
2.30 Å |
1ABI |
1ABI |
1ABI |
1ABI |
1ABI |
1ABI |
Qiu et al., 1992 |
complex with D-Phe-Pro-Arg chloromethylketone |
2.40 Å |
1ABJ |
1ABJ |
1ABJ |
1ABJ |
1ABJ |
1ABJ |
Qiu et al., 1992 |
complex with hirudin variant I |
2.00 Å |
1AD8 |
1AD8 |
1AD8 |
1AD8 |
1AD8 |
1AD8 |
Malikayil et al., 1997 |
complex with hirudin I and EOC-D-Phe-Pro-azaLys-ONP inhibitor |
2.00 Å |
1AE8 |
1AE8 |
1AE8 |
1AE8 |
1AE8 |
1AE8 |
De et al., 1997 |
complex with hirudin I and CBZ-Pro-azaLys-ONP inhibitor |
2.00 Å |
1AFE |
1AFE |
1AFE |
1AFE |
1AFE |
1AFE |
De et al., 1997 |
alpha-thrombin; complex with p-amidino-Phe-pyruvate |
1.60 Å |
1AHT |
1AHT |
1AHT |
1AHT |
1AHT |
1AHT |
Chen et al., 1995 |
complex with hirugen and morpholino-diphenylalanine-methoxypropylboronic acid |
1.85 Å |
1AI8 |
1AI8 |
1AI8 |
1AI8 |
1AI8 |
1AI8 |
Bode et al., 1992 |
complex with hirugen and phenylmethylenecarboxy-(methyleneamino-formyl-diphenylmethyl)methy-pro-boroval |
2.10 Å |
1AIX |
1AIX |
1AIX |
1AIX |
1AIX |
1AIX |
Bode et al., 1992 |
complex with hirugen inhibitor |
2.20 Å |
1AWF |
1AWF |
1AWF |
1AWF |
1AWF |
1AWF |
Weir et al., 1998 |
mature peptidase |
3.00 Å |
1AWH |
1AWH |
1AWH |
1AWH |
1AWH |
1AWH |
Weir et al., 1998 |
complex with amino(3-[(3R,5R,14S,16S,21aR)-5,14-dihydroxy-1,4,17-trioxo-16-(2-phenylethyl)icosahydro-1H-pyrrolo[1,2-d][1,4,7,11]tetraazacyclononadecin-3-yl]propylamino)methaniminium inhibitor from sponge Theonalla |
1.80 Å |
1AY6 |
1AY6 |
1AY6 |
1AY6 |
1AY6 |
1AY6 |
Maryanoff et al., 1993 |
complex with hirugen and [[[(4S,5S)-4-[[(3S,6S,8aR)-6-azanyl-5-oxo- 6-(phenylmethyl)-1,2,3,7,8,8a-hexahydroindolizin- 3-yl]carbonylamino]-5-(1,3-benzothiazol-2- yl)-5-hydroxy-pentyl]amino]-azanyl-methylidene]azanium |
2.07 Å |
1B5G |
1B5G |
1B5G |
1B5G |
1B5G |
1B5G |
St et al., 1999 |
Tyr225Ile mutant; complex with D-Phe-Pro-Arg-chloromethylketone |
2.10 Å |
1B7X |
1B7X |
1B7X |
1B7X |
1B7X |
1B7X |
Guinto et al., 1999 |
complex with hirugen and benzylsulfinyl-norVal-Gly-Arg inhibitor |
1.80 Å |
1BA8 |
1BA8 |
1BA8 |
1BA8 |
1BA8 |
1BA8 |
Krishnan et al., 1998 |
complex with hirugen |
2.10 Å |
1BB0 |
1BB0 |
1BB0 |
1BB0 |
1BB0 |
1BB0 |
Krishnan et al., 1998 |
complex with inhibitor with rigid tripeptidyl aldehyde |
2.10 Å |
1BBO |
1BBO |
1BBO |
1BBO |
1BBO |
1BBO |
Omichinski et al., 1992 |
complex with hirugen and proflavin |
2.00 Å |
1BCU |
1BCU |
1BCU |
1BCU |
1BCU |
1BCU |
Conti et al., 1998 |
complex with SDZ 229-357 inhibitor |
2.30 Å |
1BHX |
1BHX |
1BHX |
1BHX |
1BHX |
1BHX |
Wagner et al., 1998 |
complex with hirudin I and BMS-186282 synthetic inhibitor |
2.60 Å |
1BMM |
1BMM |
1BMM |
1BMM |
1BMM |
1BMM |
Malley et al., 1996 |
complex with hirudin I and BMS-186282 synthetic inhibitor |
2.80 Å |
1BMN |
1BMN |
1BMN |
1BMN |
1BMN |
1BMN |
Malley et al., 1996 |
complex with bovine pancreatic trypsin inhibitor |
2.30 Å |
1BTH |
1BTH |
1BTH |
1BTH |
1BTH |
1BTH |
van et al., 1997 |
complex with acetyl-hirudin and (5-amidino-2-benzimidazolyl) (2-benzimidazolyl)methane |
1.75 Å |
1C1U |
1C1U |
1C1U |
1C1U |
1C1U |
1C1U |
Katz et al., 1998 |
complex with acetyl-hirudin and bis(5-amidino-2-benzimidazolyl)methane |
1.98 Å |
1C1V |
1C1V |
1C1V |
1C1V |
1C1V |
1C1V |
Katz et al., 1998 |
complex with acetyl-hirudin and bis(5-amidino-2-benzimidazolyl)methane ketone hydrate |
1.90 Å |
1C1W |
1C1W |
1C1W |
1C1W |
1C1W |
1C1W |
Katz et al., 1998 |
mature peptidase |
2.10 Å |
1C4U |
1C4U |
1C4U |
1C4U |
1C4U |
1C4U |
Krishnan et al., 2000 |
complex with 2-(2,2-diphenyl-ethyl)-7-methyl-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo [1,2-A]pyridazine-5-carboxylic acid(4-carbamimidoyl-cyclohexylmethyl)-amide |
2.10 Å |
1C4V |
1C4V |
1C4V |
1C4V |
1C4V |
1C4V |
Krishnan et al., 2000 |
complex with 2-(2,2-diphenyl-ethyl)-7-methyl-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4] triazolo[1,2-A]pyridazine-5-carboxylic acid [4-(2-amino-3H-imidazol-4-yl)-cyclohexyl]-amide |
2.70 Å |
1C4Y |
1C4Y |
1C4Y |
1C4Y |
1C4Y |
1C4Y |
Krishnan et al., 2000 |
complex with hirugen and benzylsulfinyl-norVal-Gly-3-piperidyl-N-guandino-L-alaninal |
2.10 Å |
1CA8 |
1CA8 |
1CA8 |
1CA8 |
1CA8 |
1CA8 |
Krishnan et al., 1998 |
complex with 5-amidinoindole-4-benzylpiperidine inhibitor |
2.07 Å |
1D4P |
1D4P |
1D4P |
1D4P |
1D4P |
1D4P |
Chirgadze et al., 1997 |
complex with selective non-electrophilic inhibitors having cyclohexyl moieties at p1 |
2.00 Å |
1D6W |
1D6W |
1D6W |
1D6W |
1D6W |
1D6W |
|
complex with 2-propyl-pentanoic acid divalent inhibitor |
2.30 Å |
1DIT |
1DIT |
1DIT |
1DIT |
1DIT |
1DIT |
Krishnan et al., 1996 |
Ser195Ala mutant; complex with fibrinopeptide a (7-16) |
2.50 Å |
1DM4 |
1DM4 |
1DM4 |
1DM4 |
1DM4 |
1DM4 |
|
complex with RWJ-51438 and hirugen |
1.70 Å |
1DOJ |
1DOJ |
1DOJ |
1DOJ |
1DOJ |
1DOJ |
Recacha et al., 2000 |
alpha-thrombin; complex with des-Asp55 hirudin and benzamidine |
3.16 Å |
1DWB |
1DWB |
1DWB |
1DWB |
1DWB |
1DWB |
Banner & Hadvary, 1991 |
alpha-thrombin; complex with des-Asp55 hirudin and MD-805 |
3.00 Å |
1DWC |
1DWC |
1DWC |
1DWC |
1DWC |
1DWC |
Banner & Hadvary, 1991 |
alpha-thrombin; complex with des-Asp55 hirudin and NAPAP |
3.00 Å |
1DWD |
1DWD |
1DWD |
1DWD |
1DWD |
1DWD |
Banner & Hadvary, 1991 |
alpha-thrombin; complex with des-Asp55 hirudin and D-Phe-Pro-Arg-chloromethylketone |
3.00 Å |
1DWE |
1DWE |
1DWE |
1DWE |
1DWE |
1DWE |
Banner & Hadvary, 1991 |
complex with thrombomodulin |
2.30 Å |
1DX5 |
1DX5 |
1DX5 |
1DX5 |
1DX5 |
1DX5 |
|
complex with haemadin |
3.10 Å |
1E0F |
1E0F |
1E0F |
1E0F |
1E0F |
1E0F |
Richardson et al., 2000 |
complex with inhibitor P798 |
2.10 Å |
1EOJ |
1EOJ |
1EOJ |
1EOJ |
1EOJ |
1EOJ |
Slon-Usakiewicz et al., 2000 |
complex with inhibitor P628 |
2.10 Å |
1EOL |
1EOL |
1EOL |
1EOL |
1EOL |
1EOL |
Slon-Usakiewicz et al., 2000 |
alpha-thrombin; complex with hirugen and dansylArg-N-(3-ethyl-1,5-pentanediyl)amide |
2.30 Å |
1FPC |
1FPC |
1FPC |
1FPC |
1FPC |
1FPC |
Mathews & Tulinsky, 1995 |
alpha-thrombin; complex with hirudin and fibrinopeptide A |
2.50 Å |
1FPH |
1FPH |
1FPH |
1FPH |
1FPH |
1FPH |
Stubbs et al., 1992 |
complex with bch-10556 andexosite-directed peptide |
2.00 Å |
1G37 |
1G37 |
1G37 |
1G37 |
1G37 |
1G37 |
|
complex with hirudin I and N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl- N-(1S,3E)-1-[dihydroxy(diphenoxy)-lambda~5~- phosphanyl]-4-methoxybut-3-en-1-yl-L-prolinamide |
1.40 Å |
1H8D |
1H8D |
1H8D |
1H8D |
1H8D |
1H8D |
Skordalakes et al., 2001 |
complex with hirudin I and N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl- N-[(1S)-4-methoxy-1-phosphonobutyl]-L-prolinamide |
1.75 Å |
1H8I |
1H8I |
1H8I |
1H8I |
1H8I |
1H8I |
Skordalakes et al., 2001 |
prethrombin; complex with hirugen |
2.30 Å |
1HAG |
1HAG |
1HAG |
1HAG |
1HAG |
1HAG |
Vijayalakshmi et al., 1994 |
alpha-thrombin; complex with hirugen |
2.30 Å |
1HAH |
1HAH |
1HAH |
1HAH |
1HAH |
1HAH |
Vijayalakshmi et al., 1994 |
alpha-thrombin; complex with D-Phe-Pro-Arg-chloromethylketone |
2.40 Å |
1HAI |
1HAI |
1HAI |
1HAI |
1HAI |
1HAI |
Vijayalakshmi et al., 1994 |
alpha-thrombin; complex with 15-mer oligonucleotide |
2.80 Å |
1HAO |
1HAO |
1HAO |
1HAO |
1HAO |
1HAO |
Padmanabhan & Tulinsky, 1996 |
alpha-thrombin; complex with 15-mer oligonucleotide |
2.80 Å |
1HAP |
1HAP |
1HAP |
1HAP |
1HAP |
1HAP |
Padmanabhan & Tulinsky, 1996 |
alpha-thrombin; complex with a peptidyl pyridinium methyl ketone |
2.00 Å |
1HBT |
1HBT |
1HBT |
1HBT |
1HBT |
1HBT |
Rehse et al., 1995 |
alpha-thrombin; complex with hirugen |
2.60 Å |
1HDT |
1HDT |
1HDT |
1HDT |
1HDT |
1HDT |
Tabernero et al., 1995 |
alpha-thrombin; complex with hirugen |
2.20 Å |
1HGT |
1HGT |
1HGT |
1HGT |
1HGT |
1HGT |
Skrzypczak-Jankun et al., 1991 |
alpha-thrombin; complex with thrombomodulin and D-Phe-Pro-Arg-chloromethylketone |
3.00 Å |
1HLT |
1HLT |
1HLT |
1HLT |
1HLT |
1HLT |
Mathews et al., 1994 |
alpha-thrombin; complex with DNA and D-Phe-Pro-Arg-chloromethylketone |
2.90 Å |
1HUT |
1HUT |
1HUT |
1HUT |
1HUT |
1HUT |
Padmanabhan et al., 1993 |
complex with hirudin variant 1 |
2.10 Å |
1HXE |
1HXE |
1HXE |
1HXE |
1HXE |
1HXE |
Zhang & Tulinsky, 1997 |
complex with hiruden variant |
2.10 Å |
1HXF |
1HXF |
1HXF |
1HXF |
1HXF |
1HXF |
Zhang & Tulinsky, 1997 |
alpha-thrombin; complex with hirutonin-2 |
2.00 Å |
1IHS |
1IHS |
1IHS |
1IHS |
1IHS |
1IHS |
Zdanov et al., 1993 |
alpha-thrombin; complex with hirutonin-6 |
2.10 Å |
1IHT |
1IHT |
1IHT |
1IHT |
1IHT |
1IHT |
Zdanov et al., 1993 |
Ser195Ala; complex with heparin cofactor II |
2.20 Å |
1JMO |
1JMO |
1JMO |
1JMO |
1JMO |
1JMO |
Baglin et al., 2002 |
complex with a novel bicyclic lactam inhibitor |
2.50 Å |
1JWT |
1JWT |
1JWT |
1JWT |
1JWT |
1JWT |
|
complex with acetyl-D-Phe-Pro-boroArg-OH inhibitor |
1.95 Å |
1LHC |
1LHC |
1LHC |
1LHC |
1LHC |
1LHC |
Weber et al., 1995 |
complex with acetyl-D-Phe-Pro-boroLys-OH inhibitor |
2.35 Å |
1LHD |
1LHD |
1LHD |
1LHD |
1LHD |
1LHD |
Weber et al., 1995 |
complex with AC-D-Phe-Pro-boro-N-butyl-amidino-Gly-OH |
2.25 Å |
1LHE |
1LHE |
1LHE |
1LHE |
1LHE |
1LHE |
Weber et al., 1995 |
complex with AC-D-Phe-Pro-boro-homoLys-OH |
2.40 Å |
1LHF |
1LHF |
1LHF |
1LHF |
1LHF |
1LHF |
Weber et al., 1995 |
complex with AC-D-Phe-Pro-boroornithine-OH |
2.25 Å |
1LHG |
1LHG |
1LHG |
1LHG |
1LHG |
1LHG |
Weber et al., 1995 |
anticoagulant slow form |
2.80 Å |
1MH0 |
1MH0 |
1MH0 |
1MH0 |
1MH0 |
1MH0 |
Pineda et al., 2002 |
alpha-thrombin; non-covalent complex with receptor based peptide NRS |
3.10 Å |
1NRN |
1NRN |
1NRN |
1NRN |
1NRN |
1NRN |
Mathews et al., 1994 |
alpha-thrombin; non-covalent complex with receptor based peptide NRP |
3.10 Å |
1NRO |
1NRO |
1NRO |
1NRO |
1NRO |
1NRO |
Mathews et al., 1994 |
alpha-thrombin; non-covalent complex with receptor based peptide NR'S |
3.00 Å |
1NRP |
1NRP |
1NRP |
1NRP |
1NRP |
1NRP |
Mathews et al., 1994 |
alpha-thrombin; non-covalent complex with receptor based peptide D-FPR'S |
3.50 Å |
1NRQ |
1NRQ |
1NRQ |
1NRQ |
1NRQ |
1NRQ |
Mathews et al., 1994 |
alpha-thrombin; non-covalent complex with receptor based peptide XA and D-Phe-Pro-Arg-chloromethylketone |
2.40 Å |
1NRR |
1NRR |
1NRR |
1NRR |
1NRR |
1NRR |
Mathews et al., 1994 |
alpha-thrombin; non-covalent complex with receptor based peptide NRP and hirugen |
2.40 Å |
1NRS |
1NRS |
1NRS |
1NRS |
1NRS |
1NRS |
Mathews et al., 1994 |
complex with staphylocoagulase |
2.20 Å |
1NU7 |
1NU7 |
1NU7 |
1NU7 |
1NU7 |
1NU7 |
Friedrich et al., 2003 |
staphylocoagulase-prethrombin-2 complex |
2.20 Å |
1NU9 |
1NU9 |
1NU9 |
1NU9 |
1NU9 |
1NU9 |
|
d-phe-pro-arg-type thrombin inhibitor |
2.18 Å |
1NZQ |
1NZQ |
1NZQ |
1NZQ |
1NZQ |
1NZQ |
|
complex with a D-Phe-Pro-Arg-type inhibitor and a C-terminal hirudin derived exo-site inhibitor |
2.44 Å |
1O0D |
1O0D |
1O0D |
1O0D |
1O0D |
1O0D |
|
dissecting and designing inhibitor selectivity determinants at the s1 site using an artificial Ala190 protease (ala190 upa) |
1.75 Å |
1O5G |
1O5G |
1O5G |
1O5G |
1O5G |
1O5G |
|
complex with platelet receptor gpib-alpha |
2.30 Å |
1OOK |
1OOK |
1OOK |
1OOK |
1OOK |
1OOK |
|
complex with a designed fluorinated inhibitor |
1.67 Å |
1OYT |
1OYT |
1OYT |
1OYT |
1OYT |
1OYT |
|
complex with platelet receptor gpib-alpha |
2.60 Å |
1P8V |
1P8V |
1P8V |
1P8V |
1P8V |
1P8V |
|
alpha-thrombin; complex with D-Phe-Pro-Arg chloromethylketone |
1.92 Å |
1PPB |
1PPB |
1PPB |
1PPB |
1PPB |
1PPB |
Bode et al., 1989 |
complex with [phenylalaninyl-prolinyl]-[2-(pyridin-4-ylamino)-ethyl]-amine |
1.80 Å |
1QBV |
1QBV |
1QBV |
1QBV |
1QBV |
1QBV |
Bone et al., 1998 |
complex with hirugen and Asp-Phe-Glu-Glu-Ile-Pro-Glu-Glu-sulfonated Tyr-Leu |
2.20 Å |
1QHR |
1QHR |
1QHR |
1QHR |
1QHR |
1QHR |
Jhoti et al., 1999 |
complex with hirugen and Asp-Phe-Glu-Glu-Ile-Pro-Glu-Glu-sulfonated Tyr-Leu |
2.20 Å |
1QJ6 |
1QJ6 |
1QJ6 |
1QJ6 |
1QJ6 |
1QJ6 |
Jhoti et al., 1999 |
complex with hirugen and Asp-Phe-Glu-Glu-Ile-Pro-Glu-Glu-sulfonated Tyr-Leu |
2.20 Å |
1QJ7 |
1QJ7 |
1QJ7 |
1QJ7 |
1QJ7 |
1QJ7 |
Jhoti et al., 1999 |
complex with hirugen and Asp-Phe-Glu-Glu-Ile-Pro-Glu-Glu-sulfonated Tyr-Leu |
2.00 Å |
1QJI |
1QJI |
1QJI |
1QJI |
1QJI |
1QJI |
Grams et al., 1996 |
complex with bivalent, benzamidine-based synthetic inhibitor BZA-2 hirulog |
2.00 Å |
1QUR |
1QUR |
1QUR |
1QUR |
1QUR |
1QUR |
Steinmetzer et al., 1999 |
variant Glu217Lys |
2.50 Å |
1RD3 |
1RD3 |
1RD3 |
1RD3 |
1RD3 |
1RD3 |
|
complex with natural product inhibitor oscillarin |
2.04 Å |
1RIW |
1RIW |
1RIW |
1RIW |
1RIW |
1RIW |
Hanessian et al., 2004 |
fast form mutant Arg77Ala; complex with PPACK |
1.91 Å |
1SFQ |
1SFQ |
1SFQ |
1SFQ |
1SFQ |
1SFQ |
|
procoagulant fast form |
2.30 Å |
1SG8 |
1SG8 |
1SG8 |
1SG8 |
1SG8 |
1SG8 |
|
anticoagulant slow form |
2.30 Å |
1SGI |
1SGI |
1SGI |
1SGI |
1SGI |
1SGI |
|
slow form; complex with PPACK |
1.55 Å |
1SHH |
1SHH |
1SHH |
1SHH |
1SHH |
1SHH |
|
antithrombin-anhydrothrombin-heparin ternary complex structure |
3.10 Å |
1SR5 |
1SR5 |
1SR5 |
1SR5 |
1SR5 |
1SR5 |
Dementiev et al., 2004 |
complex with a novel oxyguanidine |
2.00 Å |
1T4U |
1T4U |
1T4U |
1T4U |
1T4U |
1T4U |
|
complex with a novel oxyguanidine |
2.00 Å |
1T4V |
1T4V |
1T4V |
1T4V |
1T4V |
1T4V |
|
complex with antithrombin and thrombin |
2.50 Å |
1TB6 |
1TB6 |
1TB6 |
1TB6 |
1TB6 |
1TB6 |
Li et al., 2004 |
complex with exosite-hirugen and trifluoroacetate inhibitor |
2.30 Å |
1TBZ |
1TBZ |
1TBZ |
1TBZ |
1TBZ |
1TBZ |
Matthews et al., 1996 |
Tyr225Pro mutant; complex with D-Phe-Pro-Arg-chloromethylketone |
2.10 Å |
1THP |
1THP |
1THP |
1THP |
1THP |
1THP |
Guinto et al., 1999 |
alpha-thrombin; complex with hirullin |
2.30 Å |
1THR |
1THR |
1THR |
1THR |
1THR |
1THR |
Qiu et al., 1993 |
alpha-thrombin; complex with MDL-28050 |
2.20 Å |
1THS |
1THS |
1THS |
1THS |
1THS |
1THS |
Qiu et al., 1993 |
alpha-thrombin; complex with hirugen and cyclotheonamide A |
2.30 Å |
1TMB |
1TMB |
1TMB |
1TMB |
1TMB |
1TMB |
Maryanoff et al., 1993 |
alpha-thrombin; complex with CGP 50,856 |
2.20 Å |
1TMT |
1TMT |
1TMT |
1TMT |
1TMT |
1TMT |
Priestle et al., 1993 |
alpha-thrombin; complex with hirudin fragment and D-Phe-Pro-Arg chloromethylketone |
2.50 Å |
1TMU |
1TMU |
1TMU |
1TMU |
1TMU |
1TMU |
Priestle et al., 1993 |
complex with hirugen |
1.80 Å |
1TOM |
1TOM |
1TOM |
1TOM |
1TOM |
1TOM |
|
anticoagulant mutant Trp215Ala/Glu217Ala in free form |
2.80 Å |
1TQ0 |
1TQ0 |
1TQ0 |
1TQ0 |
1TQ0 |
1TQ0 |
|
anticoagulant mutant Trp215Ala/Glu217Ala; complex with PPACK |
2.40 Å |
1TQ7 |
1TQ7 |
1TQ7 |
1TQ7 |
1TQ7 |
1TQ7 |
|
complex with hirugen and NA-(N,N-dimethylcarbamoyl)-alpha-azalysine |
2.00 Å |
1UMA |
1UMA |
1UMA |
1UMA |
1UMA |
1UMA |
Nardini et al., 1996 |
complex with BM51.1011 |
2.80 Å |
1UVS |
1UVS |
1UVS |
1UVS |
1UVS |
1UVS |
Engh et al., 1996 |
complex with Asp-Phe-Glu-Glu-Ile-Pro-Glu-Glu-Tyr-Leu (t-plasminogen activator loop) |
1.90 Å |
1VR1 |
1VR1 |
1VR1 |
1VR1 |
1VR1 |
1VR1 |
Dekker et al., 1999 |
complex with heparin |
1.85 Å |
1XMN |
1XMN |
1XMN |
1XMN |
1XMN |
1XMN |
|
complex with a p2 pyridine n-oxide inhibitor |
1.80 Å |
1Z71 |
1Z71 |
1Z71 |
1Z71 |
1Z71 |
1Z71 |
|
Gly193Ala mutant; complex with PPACK |
2.00 Å |
1Z8I |
1Z8I |
1Z8I |
1Z8I |
1Z8I |
1Z8I |
|
complex with an oxazolopyridine inhibitor 21 |
2.20 Å |
1ZGI |
1ZGI |
1ZGI |
1ZGI |
1ZGI |
1ZGI |
|
complex with an oxazolopyridine inhibitor 2 |
2.20 Å |
1ZGV |
1ZGV |
1ZGV |
1ZGV |
1ZGV |
1ZGV |
|
in 400 mm potassium chloride |
1.90 Å |
2A0Q |
2A0Q |
2A0Q |
2A0Q |
2A0Q |
2A0Q |
|
orally active thrombin inhibitors in complex with thrombin inh12 |
2.44 Å |
2A2X |
2A2X |
2A2X |
2A2X |
2A2X |
2A2X |
|
complex with the central "E" region of fibrin |
3.65 Å |
2A45 |
2A45 |
2A45 |
2A45 |
2A45 |
2A45 |
|
sodium free state |
1.93 Å |
2AFQ |
2AFQ |
2AFQ |
2AFQ |
2AFQ |
2AFQ |
|
orally active thrombin inhibitors in complex with thrombin and an exosite decapeptide |
2.46 Å |
2ANK |
2ANK |
2ANK |
2ANK |
2ANK |
2ANK |
|
ternary complex with an orally active thrombin inhibitor and a c-terminal hirudin derived exo-sit inhibitor |
2.40 Å |
2ANM |
2ANM |
2ANM |
2ANM |
2ANM |
2ANM |
|
two Ser195Ala mutant molecules; nonproductive complex with antithrombin and synthetic heparin mimetic sr123781 |
2.10 Å |
2B5T |
2B5T |
2B5T |
2B5T |
2B5T |
2B5T |
Johnson et al., 2006 |
complex with inhibitor |
1.61 Å |
2BDY |
2BDY |
2BDY |
2BDY |
2BDY |
2BDY |
|
complex with fragment-based small molecules occupying the s1 pocket |
1.25 Å |
2BVR |
2BVR |
2BVR |
2BVR |
2BVR |
2BVR |
|
complex with fragment-based small molecules occupying the s1 pocket |
1.40 Å |
2BVS |
2BVS |
2BVS |
2BVS |
2BVS |
2BVS |
|
design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic p1-p2-linker |
3.20 Å |
2BVX |
2BVX |
2BVX |
2BVX |
2BVX |
2BVX |
|
design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic p1-p2-linker |
1.83 Å |
2BXT |
2BXT |
2BXT |
2BXT |
2BXT |
2BXT |
|
design and discovery of novel, potent thrombin inhibitors with a solubilizing cationic p1-p2-linker |
2.80 Å |
2BXU |
2BXU |
2BXU |
2BXU |
2BXU |
2BXU |
|
complex with a designed inhibitor |
1.30 Å |
2CN0 |
2CN0 |
2CN0 |
2CN0 |
2CN0 |
2CN0 |
|
orally active thrombin inhibitors |
2.44 Å |
2FEQ |
2FEQ |
2FEQ |
2FEQ |
2FEQ |
2FEQ |
|
orally active thrombin inhibitors |
2.42 Å |
2FES |
2FES |
2FES |
2FES |
2FES |
2FES |
|
slow form in a self- inhibited conformation |
1.87 Å |
2GP9 |
2GP9 |
2GP9 |
2GP9 |
2GP9 |
2GP9 |
|
complex with suramin |
2.40 Å |
2H9T |
2H9T |
2H9T |
2H9T |
2H9T |
2H9T |
|
alpha-thrombin; complex with hirugen and fibrinopeptide A mimic |
2.50 Å |
2HAT |
2HAT |
2HAT |
2HAT |
2HAT |
2HAT |
Mathews & Tulinsky, 1995 |
alpha-thrombin; complex with hirulog 1 |
2.20 Å |
2HGT |
2HGT |
2HGT |
2HGT |
2HGT |
2HGT |
Skrzypczak-Jankun et al., 1991 |
gamma-thrombin |
2.50 Å |
2HNT |
2HNT |
2HNT |
2HNT |
2HNT |
2HNT |
Rydel et al., 1994 |
alpha-thrombin; complex with D-Phe-Pro-Arg chloromethylketone and bovine prothrombin fragment 2 |
3.30 Å |
2HPP |
2HPP |
2HPP |
2HPP |
2HPP |
2HPP |
Arni et al., 1993 |
alpha-thrombin; complex with D-Phe-Pro-Arg chloromethylketone and bovine prothrombin fragment 2 |
3.30 Å |
2HPQ |
2HPQ |
2HPQ |
2HPQ |
2HPQ |
2HPQ |
|
complex with hirugen |
1.70 Å |
2JH0 |
2JH0 |
2JH0 |
2JH0 |
2JH0 |
2JH0 |
|
complex with hirugen |
2.50 Å |
2JH5 |
2JH5 |
2JH5 |
2JH5 |
2JH5 |
2JH5 |
|
complex with hirugen |
2.21 Å |
2JH6 |
2JH6 |
2JH6 |
2JH6 |
2JH6 |
2JH6 |
|
human thrombin chimera with human residues 184a, 186, 186a, 186b, 186cand 222 replaced by murine thrombin equivalents. |
1.75 Å |
2OD3 |
2OD3 |
2OD3 |
2OD3 |
2OD3 |
2OD3 |
|
inhibitor-free human thrombin mutant c191a-c220a |
1.54 Å |
2PGB |
2PGB |
2PGB |
2PGB |
2PGB |
2PGB |
|
Cys191Ala-Cys220Ala mutant; complex with the inhibitor PPACK |
1.80 Å |
2PGQ |
2PGQ |
2PGQ |
2PGQ |
2PGQ |
2PGQ |
|
complex with 4-([4-(3-methylbenzoyl)pyridin-2-yl]aminomethyl)benzenecarboximidamide |
2.50 Å |
2PKS |
2PKS |
2PKS |
2PKS |
2PKS |
2PKS |
Blomberg et al., 2007 |
complex with sulfo-hirudin |
1.84 Å |
2PW8 |
2PW8 |
2PW8 |
2PW8 |
2PW8 |
2PW8 |
Liu et al., 2007 |
Tyr225Phe mutant; complex with D-Phe-Pro-Arg-chloromethylketone |
2.10 Å |
2THF |
2THF |
2THF |
2THF |
2THF |
2THF |
Guinto et al., 1999 |
thrombin with 3-cycle no f |
1.79 Å |
2V3H |
2V3H |
2V3H |
2V3H |
2V3H |
2V3H |
|
complex with heparin and PCI |
1.60 Å |
3B9F |
3B9F |
3B9F |
3B9F |
3B9F |
3B9F |
|
crystal structure of thrombin bound to the extracellular fragment of par1 |
2.20 Å |
3BEF |
3BEF |
3BEF |
3BEF |
3BEF |
3BEF |
|
slow form in a self_inhibited conformation |
1.55 Å |
3BEI |
3BEI |
3BEI |
3BEI |
3BEI |
3BEI |
|
thrombin:suramin complex |
2.50 Å |
3BF6 |
3BF6 |
3BF6 |
3BF6 |
3BF6 |
3BF6 |
|
complex with inhibitor fm19 |
1.80 Å |
3BV9 |
3BV9 |
3BV9 |
3BV9 |
3BV9 |
3BV9 |
|
complex with inhibitor 15 |
1.84 Å |
3C1K |
3C1K |
3C1K |
3C1K |
3C1K |
3C1K |
|
cyanofluorophenylacetamides as orally efficacious thrombin inhibitors |
2.18 Å |
3C27 |
3C27 |
3C27 |
3C27 |
3C27 |
3C27 |
|
complex with inhibitor |
1.80 Å |
3DA9 |
3DA9 |
3DA9 |
3DA9 |
3DA9 |
3DA9 |
|
complex with an RNA aptamer bound |
1.90 Å |
3DD2 |
3DD2 |
3DD2 |
3DD2 |
3DD2 |
3DD2 |
|
meizothrombin desf1 |
2.10 Å |
3E6P |
3E6P |
3E6P |
3E6P |
3E6P |
3E6P |
|
Trp215Ala/Glu217Ala mutant |
2.75 Å |
3EE0 |
3EE0 |
3EE0 |
3EE0 |
3EE0 |
3EE0 |
|
mutant delta(146-149e) in the free form |
1.55 Å |
3GIC |
3GIC |
3GIC |
3GIC |
3GIC |
3GIC |
|
Na-free form; complex with thrombomodulin |
2.40 Å |
3GIS |
3GIS |
3GIS |
3GIS |
3GIS |
3GIS |
|
alpha-thrombin; complex with hirugen and fibrinopeptide A mimic |
2.50 Å |
3HAT |
3HAT |
3HAT |
3HAT |
3HAT |
3HAT |
Mathews & Tulinsky, 1995 |
Trp215Ala/Glu217Ala mutant; complex withthe extracellular fragment of human par1 |
2.60 Å |
3HKJ |
3HKJ |
3HKJ |
3HKJ |
3HKJ |
3HKJ |
|
alpha-thrombin; complex with recombinant hirudin variant 2 |
2.30 Å |
3HTC |
3HTC |
3HTC |
3HTC |
3HTC |
3HTC |
Rydel et al., 1990 |
Asn143Pro mutant in e:na+ form |
1.60 Å |
3JZ1 |
3JZ1 |
3JZ1 |
3JZ1 |
3JZ1 |
3JZ1 |
|
Asn143Pro mutant in e* form |
2.40 Å |
3JZ2 |
3JZ2 |
3JZ2 |
3JZ2 |
3JZ2 |
3JZ2 |
|
precursor; complex with fragment-2 |
1.85 Å |
3K65 |
3K65 |
3K65 |
3K65 |
3K65 |
3K65 |
|
Ser195Ala mutant; complex with the extracellular fragment of human par1 |
1.80 Å |
3LU9 |
3LU9 |
3LU9 |
3LU9 |
3LU9 |
3LU9 |
|
precursor |
2.20 Å |
3NXP |
3NXP |
3NXP |
3NXP |
3NXP |
3NXP |
|
structural basis of thrombin mediated factor v activation: essential role of the hirudin-like sequence glu666-glu672 for processing at theheavy chain-b domain junction |
1.70 Å |
3P6Z |
3P6Z |
3P6Z |
3P6Z |
3P6Z |
3P6Z |
|
structural basis of thrombin-mediated factor v activation: essential role of the hirudin-like sequence glu666-glu672 for processing at theheavy chain-b domain junction |
2.55 Å |
3P70 |
3P70 |
3P70 |
3P70 |
3P70 |
3P70 |
|
mechanism of sulfotyrosine-mediated glycoprotein ib interaction with two distinct alpha-thrombin sites |
3.20 Å |
3PMH |
3PMH |
3PMH |
3PMH |
3PMH |
3PMH |
|
complex with benzothiazole guanidine |
1.65 Å |
3PO1 |
3PO1 |
3PO1 |
3PO1 |
3PO1 |
3PO1 |
|
Asp102Asn mutant; complex with the extracellular fragment of human par4. |
2.80 Å |
3QDZ |
3QDZ |
3QDZ |
3QDZ |
3QDZ |
3QDZ |
|
the allosteric e*-e equilibrium is a key property of the trypsin fold |
2.10 Å |
3QGN |
3QGN |
3QGN |
3QGN |
3QGN |
3QGN |
|
complex with a modified thrombin binding aptamer (mtba) |
2.14 Å |
3QLP |
3QLP |
3QLP |
3QLP |
3QLP |
3QLP |
|
human thrombin with residues 145-150 of murine thrombin. |
1.75 Å |
3R3G |
3R3G |
3R3G |
3R3G |
3R3G |
3R3G |
|
Tyr225Pro mutant in the e* form |
1.90 Å |
3S7H |
3S7H |
3S7H |
3S7H |
3S7H |
3S7H |
|
Tyr225Pro mutant in the e form |
1.90 Å |
3S7K |
3S7K |
3S7K |
3S7K |
3S7K |
3S7K |
|
prethrombin-2 mutant Ser195Ala in the alternative form |
1.90 Å |
3SQE |
3SQE |
3SQE |
3SQE |
3SQE |
3SQE |
|
prethrombin-2 mutant Ser195Ala in the the open form |
2.20 Å |
3SQH |
3SQH |
3SQH |
3SQH |
3SQH |
3SQH |
|
unliganded wild-type |
1.55 Å |
3U69 |
3U69 |
3U69 |
3U69 |
3U69 |
3U69 |
|
complex with D-Phe-Pro-D-Arg-D-Thr |
1.28 Å |
3U8O |
3U8O |
3U8O |
3U8O |
3U8O |
3U8O |
|
complex with D-Phe-Pro-D-Arg-Ile |
1.47 Å |
3U8R |
3U8R |
3U8R |
3U8R |
3U8R |
3U8R |
|
complex with D-Phe-Pro-D-Arg-Cys |
1.86 Å |
3U8T |
3U8T |
3U8T |
3U8T |
3U8T |
3U8T |
|
complex with thrombin |
2.60 Å |
4BOH |
4BOH |
4BOH |
4BOH |
4BOH |
4BOH |
|
low-salt crystal structure; complex with GPIBalpha peptide |
1.60 Å |
4CH2 |
4CH2 |
4CH2 |
4CH2 |
4CH2 |
4CH2 |
|
high-salt crystal structure; complex with GPIBalpha peptide |
1.75 Å |
4CH8 |
4CH8 |
4CH8 |
4CH8 |
4CH8 |
4CH8 |
|
complex with thrombin binding aptamer in the presence of sodium ions |
1.80 Å |
4DIH |
4DIH |
4DIH |
4DIH |
4DIH |
4DIH |
|
complex with thrombin binding aptamer in the presence of potassium ions |
2.05 Å |
4DII |
4DII |
4DII |
4DII |
4DII |
4DII |
|
complex with anophelin |
2.30 Å |
4E05 |
4E05 |
4E05 |
4E05 |
4E05 |
4E05 |
Figueiredo et al., 2012 |
complex with anophelin |
3.20 Å |
4E06 |
4E06 |
4E06 |
4E06 |
4E06 |
4E06 |
Figueiredo et al., 2012 |
crystal structure of thrombin mutant Glu14ea/Asp14la/Glu18Ala/Ser195Ala |
2.19 Å |
4H6S |
4H6S |
4H6S |
4H6S |
4H6S |
4H6S |
|
crystal structure of prethrombin-2 mutant e14ea/d14la/e18a/s195a |
2.40 Å |
4H6T |
4H6T |
4H6T |
4H6T |
4H6T |
4H6T |
|
Ser195Ala mutant; complex with argatroban |
2.40 Å |
4HFP |
4HFP |
4HFP |
4HFP |
4HFP |
4HFP |
|
alpha-thrombin; complex with recombinant hirudin variant 2 |
2.30 Å |
4HTC |
4HTC |
4HTC |
4HTC |
4HTC |
4HTC |
Rydel et al., 1991 |
recombinant Gla-domainless prothrombin mutant Ser525Ala |
3.30 Å |
4HZH |
4HZH |
4HZH |
4HZH |
4HZH |
4HZH |
|
complex with a 27-mer aptamer bound to exosite ii |
2.40 Å |
4I7Y |
4I7Y |
4I7Y |
4I7Y |
4I7Y |
4I7Y |
|
complex with the tba deletion mutant lacking thymine 12 nucleobase |
1.65 Å |
4LZ1 |
4LZ1 |
4LZ1 |
4LZ1 |
4LZ1 |
4LZ1 |
|
complex with the tba deletion mutant lacking thymine 3 nucleobase |
2.56 Å |
4LZ4 |
4LZ4 |
4LZ4 |
4LZ4 |
4LZ4 |
4LZ4 |
|
crystal structure of ca2+-free prothrombin deletion mutant residues 146-167 |
2.81 Å |
4NZQ |
4NZQ |
4NZQ |
4NZQ |
4NZQ |
4NZQ |
|
crystal structure of ca2+ bound prothrombin deletion mutant residues 146-167 |
3.38 Å |
4O03 |
4O03 |
4O03 |
4O03 |
4O03 |
4O03 |
|
Ser195Thr mutant (free form) |
1.70 Å |
4RKJ |
4RKJ |
4RKJ |
4RKJ |
4RKJ |
4RKJ |
|
Ser195Thr mutant; complex with PPACK |
1.84 Å |
4RKO |
4RKO |
4RKO |
4RKO |
4RKO |
4RKO |
|
Ser195Ala mutant; complex with the active site inhibitor argatroban |
3.00 Å |
4RN6 |
4RN6 |
4RN6 |
4RN6 |
4RN6 |
4RN6 |
|
complex with hirunorm IV inhibitor |
2.50 Å |
4THN |
4THN |
4THN |
4THN |
4THN |
4THN |
Lombardi et al., 1999 |
complex with 4-(((1-((2s)-1-((2r)-2-( benzylsulfonylamino)-3-phenyl-propanoyl)pyrrolidin-2-yl)-1- oxo-ethyl)amino)methyl)benzamidine |
1.43 Å |
4UFD |
4UFD |
4UFD |
4UFD |
4UFD |
4UFD |
|
complex with (2r)-2-(benzylsulfonylamino)-n-(2-( (4-carbamimidoylphenyl)methylamino)-2-oxo-butyl)-3-phenyl- propanamide |
1.59 Å |
4UFE |
4UFE |
4UFE |
4UFE |
4UFE |
4UFE |
|
complex with (2r)-2-(benzylsulfonylamino)-n-(2-( (4-carbamimidoylphenyl)methylamino)-2-oxo-ethyl)-n-methyl- 3-phenyl-propanamide |
1.55 Å |
4UFF |
4UFF |
4UFF |
4UFF |
4UFF |
4UFF |
|
complex with (2r)-2-(benzylsulfonylamino)-n-(( 1s)-2-((4-carbamimidoylphenyl)methylamino)-1-methyl-2-oxo- ethyl)-n-methyl-3-phenyl-propanamide ethane |
1.65 Å |
4UFG |
4UFG |
4UFG |
4UFG |
4UFG |
4UFG |
|
thrombin inhibitor |
1.40 Å |
5A2M |
5A2M |
5A2M |
5A2M |
5A2M |
5A2M |
|
complex with 3-chloro-benzamide |
1.12 Å |
5AFY |
5AFY |
5AFY |
5AFY |
5AFY |
5AFY |
|
complex with (2r)-2-(benzylsulfonylamino)-n-(2-( (4-carbamimidoylphenyl)methylamino)-2-oxo-propyl)-3-phenyl- propanamide |
1.53 Å |
5AFZ |
5AFZ |
5AFZ |
5AFZ |
5AFZ |
5AFZ |
|
complex with ((4-chlorophenyl)sulfamoyl))diemethylamine |
1.24 Å |
5AHG |
5AHG |
5AHG |
5AHG |
5AHG |
5AHG |
|
complex with a duplex/quadruplex 31-mer DNA aptamer |
2.98 Å |
5CMX |
5CMX |
5CMX |
5CMX |
5CMX |
5CMX |
|
complex with RNA aptamer |
1.86 Å |
5DO4 |
5DO4 |
5DO4 |
5DO4 |
5DO4 |
5DO4 |
|
complex with an exosite 1-specific IgA Fab |
1.90 Å |
5E8E |
5E8E |
5E8E |
5E8E |
5E8E |
5E8E |
|
prothrombin deletion mutant residues 146-167 ( form ii ). |
3.21 Å |
5EDK |
5EDK |
5EDK |
5EDK |
5EDK |
5EDK |
|
prothrombin deletion mutant residues 154-167 ( form i ) |
2.20 Å |
5EDM |
5EDM |
5EDM |
5EDM |
5EDM |
5EDM |
|
sandwiched between two dna aptamers: hd22 and hd1- deltat3 |
2.95 Å |
5EW1 |
5EW1 |
5EW1 |
5EW1 |
5EW1 |
5EW1 |
|
sandwiched between two dna aptamers: hd22 and hd1- deltat12 |
3.59 Å |
5EW2 |
5EW2 |
5EW2 |
5EW2 |
5EW2 |
5EW2 |
|
complex with hirunorm V |
2.10 Å |
5GDS |
5GDS |
5GDS |
5GDS |
5GDS |
5GDS |
De et al., 1998 |
complex with avathrin |
2.09 Å |
5GIM |
5GIM |
5GIM |
5GIM |
5GIM |
5GIM |
|
Asp189Ala mutant |
1.70 Å |
5JDU |
5JDU |
5JDU |
5JDU |
5JDU |
5JDU |
|
complex with (s)-n-(2-(aminomethyl)-5-chlorobenzyl)-1- ((benzylsulfonyl)-d-arginyl)pyrrolidine-2-carboxamide |
1.46 Å |
5JFD |
5JFD |
5JFD |
5JFD |
5JFD |
5JFD |
|
complex with (s)-1-((r)-2-amino-3-cyclohexylpropanoyl)-n- (4-carbamimidoylbenzyl)pyrrolidine-2-carboxamide |
1.27 Å |
5JZY |
5JZY |
5JZY |
5JZY |
5JZY |
5JZY |
|
complex with madanin |
1.63 Å |
5L6N |
5L6N |
5L6N |
5L6N |
5L6N |
5L6N |
|
complex with (s)-1-((r)-2-amino-3-cyclohexylpropanoyl)-n- (5-chloro-2-(hydroxymethyl)benzy l)pyrrolidine-2-carboxamide |
1.39 Å |
5LCE |
5LCE |
5LCE |
5LCE |
5LCE |
5LCE |
|
complex with (s)-1-((r)-2-amino-3-cyclohexylpropanoyl)-n- (2-(aminomethyl)-5-chlorobenzyl) pyrrolidine-2-carboxamide |
1.50 Å |
5LPD |
5LPD |
5LPD |
5LPD |
5LPD |
5LPD |
|
Ala190Ser mutant; complex with (s) -1 - ((r) -2-amino-3,3- diphenylpropanoyl) -n- (3-chlorobenzyl) pyrrolidine-2-carboxamide |
1.40 Å |
5MJT |
5MJT |
5MJT |
5MJT |
5MJT |
5MJT |
|
Ala190Ser mutant; complex with (s)-1-(d-phenylalanyl)-n-(3- chlorobenzyl)pyrrolidine-2-carboxamide |
1.62 Å |
5MLS |
5MLS |
5MLS |
5MLS |
5MLS |
5MLS |
|
Ala190Ser mutant; complex with (s)-1-(d-phenylalanyl)-n-(4- carbamimidoylbenzyl)pyrrolidine-2-carboxamide |
1.29 Å |
5MM6 |
5MM6 |
5MM6 |
5MM6 |
5MM6 |
5MM6 |
|
complex with anopheles gambiae ce5 anticoagulant |
1.45 Å |
5NHU |
5NHU |
5NHU |
5NHU |
5NHU |
5NHU |
|
Trp215Ala/Glu217Ala mutant fused to EGF456 of thrombomodulin via a 31-residue linker; complex with PPACK |
2.34 Å |
5TO3 |
5TO3 |
5TO3 |
5TO3 |
5TO3 |
5TO3 |
|
prothrombin mutant Ser101Cys/Ala470Cys |
6.00 Å |
6BJR |
6BJR |
6BJR |
6BJR |
6BJR |
6BJR |
|
crystal structure of human prothrombin mutant s101c/a470c |
4.12 Å |
6C2W |
6C2W |
6C2W |
6C2W |
6C2W |
6C2W |
|
reversible covalent direct thrombin inhibitors |
2.90 Å |
6CYM |
6CYM |
6CYM |
6CYM |
6CYM |
6CYM |
|
complex with a novel glucose-conjugated potent inhibitor |
1.94 Å |
6EO8 |
6EO8 |
6EO8 |
6EO8 |
6EO8 |
6EO8 |
|
complex with a novel glucose-conjugated potent inhibitor |
1.84 Å |
6EO9 |
6EO9 |
6EO9 |
6EO9 |
6EO9 |
6EO9 |
|
complex with nu172,a duplex/quadruplex 26-mer dna aptamer, in the presence of potassium ions. |
2.50 Å |
6EVV |
6EVV |
6EVV |
6EVV |
6EVV |
6EVV |
|
complex with 4-chloro-benzamidine |
1.27 Å |
6FJT |
6FJT |
6FJT |
6FJT |
6FJT |
6FJT |
|
complex with mi2100 ((s)-n-(2-(aminomethyl)-5- chlorobenzyl)-1-((benzylsulfonyl)-l-arginyl)pyrrolidine-2- carboxamide) |
1.45 Å |
6GBW |
6GBW |
6GBW |
6GBW |
6GBW |
6GBW |
|
complex with nu172,a duplex/quadruplex 26-mer DNA aptamer, in the presence of sodium ions. |
2.80 Å |
6GN7 |
6GN7 |
6GN7 |
6GN7 |
6GN7 |
6GN7 |
|
complex with SEL2711 inhibitor |
2.10 Å |
7KME |
7KME |
7KME |
7KME |
7KME |
7KME |
Mochalkin & Tulinsky, 1999 |
complex with SEL2710 inhibitor |
2.10 Å |
8KME |
8KME |
8KME |
8KME |
8KME |
8KME |
Mochalkin & Tulinsky, 1999 |
Mus musculus
|
mature peptidase |
2.20 Å |
2OCV |
2OCV |
2OCV |
2OCV |
2OCV |
2OCV |
Marino et al., 2007 |
mature peptidase |
2.00 Å |
2PUX |
2PUX |
2PUX |
2PUX |
2PUX |
2PUX |
Bah et al., 2007 |
mature peptidase |
3.50 Å |
2PV9 |
2PV9 |
2PV9 |
2PV9 |
2PV9 |
2PV9 |
Bah et al., 2007 |
mature peptidase |
2.40 Å |
3EDX |
3EDX |
3EDX |
3EDX |
3EDX |
3EDX |
|
mature peptidase |
1.94 Å |
3HK3 |
3HK3 |
3HK3 |
3HK3 |
3HK3 |
3HK3 |
Gandhi et al., 2009 |
mature peptidase |
3.20 Å |
3HK6 |
3HK6 |
3HK6 |
3HK6 |
3HK6 |
3HK6 |
Gandhi et al., 2009 |
mature peptidase |
2.20 Å |
3HKI |
3HKI |
3HKI |
3HKI |
3HKI |
3HKI |
Gandhi et al., 2009 |