Structure for subfamily S8A unassigned peptidases

Summary Sequences Sequence features Distribution Structure Literature

 

PDB Organism Resolution Comment
1WVM_A Pseudoalteromonas sp. AS-11 1.60 Å complex with chymostatin
Catalytic residues are shown in ball-and-stick representation: Asp174 in pink, His209 in purple and Ser513 in orange. The structural magnesium atoms are shown as green CPK spheres. The structural calcium atoms are shown as yellow CPK spheres. The bound inhibitor, chymostatin, is shown in grey ball-and-stick representation.
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2B6N_A Serratia sp. GF96 1.80 Å mature
Catalytic residues are shown in ball-and-stick representation: Asp165 in light pink, His198 in purple, Asn285 in dark pink and Ser350 in orange. The structural calcium atom is shown as a yellow CPK sphere.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Mycobacterium thermoresistibile
structure of a serine protease mycp1, an essential component of the type vii (esx-1) secretion system 2.00 Å 4HVL 4HVL 4HVL 4HVL 4HVL 4HVL
Pseudoalteromonas sp. AS-11
mature  peptidase 1.80 Å 1V6C 1V6C 1V6C 1V6C 1V6C 1V6C
complex with chymostatin 1.60 Å 1WVM 1WVM 1WVM 1WVM 1WVM 1WVM
Serratia sp. GF96
mature  peptidase 1.80 Å 2B6N 2B6N 2B6N 2B6N 2B6N 2B6N Helland et al., 2006
Thermococcus kodakarensis
mature  peptidase 2.00 Å 3AFG 3AFG 3AFG 3AFG 3AFG 3AFG Foophow et al., 2010