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Lactobacillus johnsonii

Taxonomy
Taxonomy database identifier: 33959
Superkingdom Bacteria
Phylum Firmicutes
Class Bacilli
Order Lactobacillales
Family Lactobacillaceae
Genus Lactobacillus
Species johnsonii
Peptidase View peptidase sequences from Lactobacillus johnsonii
Count of known and putative peptidases: 88, non-peptidase homologues 28
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0040710 lspA LJ_1187
AD A24 unassigned family A24 unassigned peptidases MER0426222 HMPREF0528_0195 LJP_0299c
AD A24 unassigned family A24 unassigned peptidases MER0040711 LJ_0334
CA C1 C01.084 bleomycin hydrolase (animal) MER0293478 FI9785_591
CA C1 C01.086 aminopeptidase C MER0040712 pepC FI9785_413
CA C1 C01.086 aminopeptidase C MER0040717 FI9785_589
CA C1 C01.086 aminopeptidase C MER0040714 PF01_00224
CA C1 unassigned subfamily C1A unassigned peptidases MER0429403 FI9785_590
CA C1 unassigned subfamily C1B unassigned peptidases MER0040716 LJP_0182
CA C1 unassigned subfamily C1B unassigned peptidases MER0040713 PF01_01717
CA C1 unassigned subfamily C1B unassigned peptidases MER0040715 pepE FI9785_694
CA C1 unassigned subfamily C1B unassigned peptidases MER1166551
CA C1 unassigned subfamily C1B unassigned peptidases MER1167178
CA C39 C39.001 bacteriocin-processing peptidase MER0040723 LJP_0581
CA C39 C39.001 bacteriocin-processing peptidase MER0040724 LJ_0767
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0040718 pcp LJ_1798
CL C60 C60.006 sortase A (Streptococcus-type) MER0040727 srtA FI9785_791
CL C60 unassigned subfamily C60B unassigned peptidases MER0040728 LJ_1570
CL C82 C82.001 L,D-transpeptidase (Enterococcus-type) MER0116235 LJ_0598
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0741227 T285_08130
CO C40 C40.007 YddH peptidase MER0040725 LJ_0597
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0069637 LJ_1806
G- G5 unassigned family G5 unassigned peptidases MER0938791 FI9785_165
G- G5 unassigned family G5 unassigned peptidases MER0936726 FI9785_1758
G- G5 unassigned family G5 unassigned peptidases MER0069633 FI9785_550
G- G5 unassigned family G5 unassigned peptidases MER0069636 LJ_1642
G- G5 unassigned family G5 unassigned peptidases MER0911856 FI9785_62/FI9785_628/LJ_0777/T285_03015
G- G5 unassigned family G5 unassigned peptidases MER0497260
MA M3 M03.007 oligopeptidase F MER0041997 LJ_0581
MA M10 unassigned family M10 unassigned peptidases MER0042039 FI9785_1612
MA M10 unassigned family M10 unassigned peptidases MER0467201 FI9785_1054
MA M13 M13.010 oligopeptidase O2 MER0040730 LJ_1269
MA M13 M13.010 oligopeptidase O2 MER0040732 LJ_0030
MA M13 M13.010 oligopeptidase O2 MER0040731 pepO2 FI9785_214
MA M26 unassigned family M26 unassigned peptidases MER1072144
MA M26 unassigned family M26 unassigned peptidases MER1072785
MA M26 unassigned family M26 unassigned peptidases MER1109422
MA M26 unassigned family M26 unassigned peptidases MER1045478
MA M26 unassigned family M26 unassigned peptidases MER0042263 LJ_1680
MA M26 unassigned family M26 unassigned peptidases MER0504860
MA M41 unassigned family M41 unassigned peptidases MER0042321 ftsH FI9785_344
MA M48 unassigned subfamily M48B unassigned peptidases MER0042358 htpX1 LJ_0076
MA M48 unassigned subfamily M48B unassigned peptidases MER0042359 htpX2 LJ_1057
MA M48 unassigned subfamily M48B unassigned peptidases MER0300805 htpX HMPREF0528_1170
MA M78 non-peptidase homologue family M78 non-peptidase homologues MER0908631 FI9785_p9785L.11
MA M78 unassigned family M78 unassigned peptidases MER0909662 ATCC11506LJ0035
MA M78 unassigned family M78 unassigned peptidases MER0908408 LJ_1054/PF01_00805
ME M16 unassigned subfamily M16B unassigned peptidases MER0040733 FI9785_1368
MG M24 M24.006 bacillus Xaa-Pro aminopeptidase MER0040739 pepQ/pepQ1 LJ_0490
MG M24 unassigned subfamily M24A unassigned peptidases MER0042210 map/pepM PF01_00359
MG M24 unassigned subfamily M24B unassigned peptidases MER0040740 pepP FI9785_709
MH M20 M20.004 peptidase V MER0040736 pepV HMPREF0528_0025
MH M20 unassigned subfamily M20A unassigned peptidases MER0854639 HMPREF0528_0846
MH M20 unassigned subfamily M20B unassigned peptidases MER0040734 pepT FI9785_902
MH M20 unassigned subfamily M20B unassigned peptidases MER0040735 pepT FI9785_1587
MH M20 unassigned family M20D unassigned peptidases MER0372979 hipO PF01_00698
MH M42 unassigned family M42 unassigned peptidases MER0040741 HMPREF0528_1751
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0042579 LJ_0118
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0038300 pyrC FI9785_921
MM M50 non-peptidase homologue family M50 non-peptidase homologues MER0331785
MM M50 unassigned subfamily M50B unassigned peptidases MER0900621 LJP_0735/PF01_004/PF01_00476/T285_03880
MM M50 unassigned subfamily M50B unassigned peptidases MER0042439 LJ_1494 LJ_1494
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0069635 LJ_1425
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0480178
PA S1 S01.447 HtrA peptidase (Streptococcus-type) MER0040742 htrA FI9785_127
PB C44 C44.A08 glutamine-fructose-6-phosphate transaminase precursor (Dictyostelium discoideum) MER0455175 glmS PF01_00373
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0041946 glmS FI9785_684
PB C44 unassigned family C44 unassigned peptidases MER0041945 asnB PF01_01663
PB C59 C59.951 choloylglycine hydrolase MER0041977 LJ_1147
PB C59 C59.951 choloylglycine hydrolase MER0035110 cbsHbeta LJ_0056
PB C59 C59.951 choloylglycine hydrolase MER0020185 PF01_00515
PB C59 unassigned family C59 unassigned peptidases MER0330077 FI9785_1052
PB C59 unassigned family C59 unassigned peptidases MER0330197 HMPREF0528_1281
PB C69 C69.001 dipeptidase A MER0021442 LJ_0258
PB C69 C69.001 dipeptidase A MER0021888 LJ_0718
PB C69 C69.001 dipeptidase A MER0021875 HMPREF0528_1732
PB C69 C69.001 dipeptidase A MER0022440 pepDB FI9785_747
PB C69 C69.001 dipeptidase A MER0038293 LJ_0653
PB C69 C69.001 dipeptidase A MER0037856 LJ_0545
PB C69 C69.002 arginine aminopeptidase (Streptococcus-type) MER0386764
PB C69 unassigned family C69 unassigned peptidases MER0313770 FI9785_613
PB T1 unassigned subfamily T1B unassigned peptidases MER0042526 hslV FI9785_1095
PB T2 T02.007 Chryseobacterium meningosepticum-type N4-(beta-N-acetylglucosaminyl)-L-asparaginase MER0306936 HMPREF0528_0847
PC C26 C26.957 GMP synthase MER0040722 guaA PF01_01772
PC C26 C26.964 CTP synthetase MER0069628 pyrG LJP_0228
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0040719 carA PF01_00590
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0451319 carA LJP_0976
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0040720 FI9785_1703
PC C26 unassigned family C26 unassigned peptidases MER0069632 FI9785_540
PC C26 unassigned family C26 unassigned peptidases MER0450052 PF01_00196
PC C26 unassigned family C26 unassigned peptidases MER0040721 puuD LJ_0509
PC C26 unassigned family C26 unassigned peptidases MER0331784 LJP_0510
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0040726 FI9785_401
SB S8 unassigned subfamily S8A unassigned peptidases MER0040743 LJ_1840
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0040746 LJ_1610
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0042801 FI9785_1559
SC S9 unassigned family S9 unassigned peptidases MER0040745 FI9785_180
SC S9 unassigned family S9 unassigned peptidases MER0040748 LJ_1228
SC S9 unassigned family S9 unassigned peptidases MER0040744 FI9785_696
SC S9 unassigned family S9 unassigned peptidases MER0040747 LJ_0536
SC S15 S15.001 Xaa-Pro dipeptidyl-peptidase MER0040754 pepX FI9785_681
SC S33 S33.004 prolyl dipeptidase (Lactobacillus-type) MER0040760 pepI FI9785_117
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0040762 LJ_0101
SC S33 unassigned family S33 unassigned peptidases MER0040761 FI9785_1308
SC S33 unassigned family S33 unassigned peptidases MER0038258 LJ_1224
SE S11 S11.006 D,D-carboxypeptidase PBP3 (Streptococcus-type) MER0040749 dacA FI9785_527
SE S11 S11.006 D,D-carboxypeptidase PBP3 (Streptococcus-type) MER0504861
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0947920 HMPREF0528_0735/T285_07880
SE S11 unassigned family S11 unassigned peptidases MER1306717
SE S12 S12.950 esterase EstB MER0040751 PF01_00935
SE S12 S12.A21 pbpX g.p. (Bacillus subtilis) MER0040752 pbpX PF01_01151
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0040750 LJ_1780
SE S12 unassigned family S12 unassigned peptidases MER0421981 FI9785_1730
SE S12 unassigned family S12 unassigned peptidases MER0356174 FI9785_1768
SE S12 unassigned family S12 unassigned peptidases MER0331787 LJP_1717c
SF S24 S24.001 repressor LexA MER0040757 lexA LJ_1508
SF S26 unassigned subfamily S26A unassigned peptidases MER0040759 LJ_1291
SF S26 unassigned subfamily S26A unassigned peptidases MER0040758 LJP_0714c
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0040756 FI9785_1205
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0040755 radA FI9785_416
SK S14 S14.001 peptidase Clp (type 1) MER0040753 clpP LJ_0869
SK S41 unassigned subfamily S41A unassigned peptidases MER0040763 LJ_1104
ST S54 unassigned family S54 unassigned peptidases MER0040764 FI9785_1410

GENOME ANALYSIS: Comparison with 64 completely sequenced genomes from genus Lactobacillus
Family Comment
C1 lineage specific expansion (10 homologues)
M26 significant presence (6 homologues)
S41 significant presence (1 homologues)
T2 significant presence (1 homologues)

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