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Yersinia bercovieri

Taxonomy
Taxonomy database identifier: 634
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Yersinia
Species bercovieri
Peptidase View peptidase sequences from Yersinia bercovieri
Count of known and putative peptidases: 69, non-peptidase homologues 17
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AD A24 unassigned subfamily A24A unassigned peptidases MER0262214 yberc0001_32070
AD A24 unassigned subfamily A24B unassigned peptidases MER0693046 yberc0001_35150
AE A31 A31.001 HybD peptidase MER0173332
AE A31 A31.003 HycI peptidase MER0427675
AF A26 unassigned family A26 unassigned peptidases MER1159489
AF A26 unassigned family A26 unassigned peptidases MER1159495
AF A26 unassigned family A26 unassigned peptidases MER0113574 yberc0001_38870
CA C39 C39.005 colicin V processing peptidase MER0237649 yberc0001_36080
CA C39 C39.005 colicin V processing peptidase MER0173390
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0445893
CD C80 C80.001 RTX self-cleaving toxin MER0030048
CD C80 unassigned family C80 unassigned peptidases MER0275590 yberc0001_27550
CD C80 unassigned family C80 unassigned peptidases MER0321703
CD C80 unassigned family C80 unassigned peptidases MER0321704
CD C80 unassigned family C80 unassigned peptidases MER0321699
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0113108 pcp yberc0001_37270
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0462178 yberc0001_22190
CO C40 C40.004 spr peptidase MER0452458
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0161691
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0377023 yberc0001_22290
G- G5 unassigned family G5 unassigned peptidases MER0940043 yberc0001_37740
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0160653
MA M3 M03.004 oligopeptidase A MER0112931
MA M10 unassigned subfamily M10B unassigned peptidases MER0188091 yberc0001_3290
MA M32 unassigned family M32 unassigned peptidases MER0173286 yberc0001_23000
MA M41 M41.001 FtsH peptidase MER0112506 ftsH yberc0001_8650
MA M48 M48.002 HtpX peptidase MER0296054 htpX yberc0001_19630
MA M48 M48.022 low osmolarity induced peptidase MER0885745 yberc0001_32550
MA M90 M90.001 MtfA peptidase MER0228655 mtfA yberc0001_18050
MD M15 unassigned family M15 unassigned peptidases MER0469595
MD M74 M74.001 murein endopeptidase MER1261729 mepA
MD M74 M74.001 murein endopeptidase MER0112929 yberc0001_37380
ME M16 M16.001 pitrilysin MER0161485 yberc0001_32340
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0162062
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470920
ME M16 unassigned subfamily M16B unassigned peptidases MER0161194 yberc0001_7410
ME M16 unassigned subfamily M16B unassigned peptidases MER0390867 yberc0001_34060
MF M17 M17.003 PepA aminopeptidase MER0173203 pepA yberc0001_9370
MF M17 M17.004 PepB aminopeptidase MER0113881 pepB yberc0001_29690
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0233774 yberc0001_31370
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0160495 yberc0001_33950
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0160727
MG M24 M24.004 aminopeptidase P (bacteria) MER0113539 yberc0001_32720
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0161936
MG M24 unassigned subfamily M24A unassigned peptidases MER1221181
MG M24 unassigned subfamily M24B unassigned peptidases MER0957460
MH M20 M20.003 peptidase T MER0113355
MH M20 M20.007 Xaa-His dipeptidase MER0161048
MH M20 M20.010 DapE peptidase MER0844064 dapE
MH M20 M20.974 acetylornithine deacetylase ArgE MER0369922 argE yberc0001_5650
MH M28 M28.005 IAP aminopeptidase MER0160776 yberc0001_11980
MJ M38 M38.982 urease MER0045628 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860809 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0869826 yberc0001_28030
MM M50 M50.004 RseP peptidase MER0894799 yberc0001_31460
MO M23 M23.011 YebA peptidase MER0161813 yberc0001_21640
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0478849
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478240
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478130
MU M103 M103.UNW family M103 non-peptidase homologues MER0238409 yberc0001_1380
NB N6 N06.003 EscU protein (Escherichia coli) MER0326987
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294749 yberc0001_15590
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294951
PA S1 S01.260 B1598 peptidase MER0488567
PA S1 S01.273 DegP peptidase MER0327451 yberc0001_11590
PA S1 unassigned subfamily S1C unassigned peptidases MER0210576 yberc0001_270
PA S1 unassigned subfamily S1C unassigned peptidases MER0327501 yberc0001_280
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0161121
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456063
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459207
PB C59 unassigned family C59 unassigned peptidases MER0161577 yberc0001_32840
PB T1 T01.006 HslV component of HslUV peptidase MER0323464
PB T1 T01.022 Anbu protein MER1143088 ERS008506_03702
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0160939 yberc0001_14280
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436201
PC C26 C26.957 GMP synthase MER0443161
PC C26 C26.964 CTP synthetase MER0448112
PC C26 unassigned family C26 unassigned peptidases MER0441892
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160887 yberc0001_14060
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER0160599 YberA_01003396
SC S9 S09.010 oligopeptidase B MER0161639 yberc0001_20040
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1000713 yberc0001_23650
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0209784
SC S9 unassigned family S9 unassigned peptidases MER0996910 yberc0001_9050
SC S9 unassigned family S9 unassigned peptidases MER0998777 yberc0001_16200
SC S33 S33.001 prolyl aminopeptidase MER0112930 yberc0001_20020
SC S33 unassigned family S33 unassigned peptidases MER1338704
SC S33 unassigned family S33 unassigned peptidases MER0213005
SC S33 unassigned family S33 unassigned peptidases MER0215588
SE S11 S11.002 murein-DD-endopeptidase MER0352420 yberc0001_26820
SE S11 S11.003 penicillin-binding protein 6 MER0351156 yberc0001_26280
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0351281 yberc0001_15020
SE S12 S12.006 class C beta-lactamase MER0028280 ampC
SE S12 unassigned family S12 unassigned peptidases MER1008865 yberc0001_38800
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0161405
SF S24 S24.001 repressor LexA MER0471915
SF S26 S26.001 signal peptidase I MER0112592 yberc0001_30240
SJ S16 S16.001 Lon-A peptidase MER0299663
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0162183
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0160833
SK S14 S14.001 peptidase Clp (type 1) MER0279622 clpP yberc0001_13920
SK S14 unassigned family S14 unassigned peptidases MER0491511
SK S41 S41.001 C-terminal processing peptidase-1 MER0113237 yberc0001_19640
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0160418
SK S49 unassigned subfamily S49A unassigned peptidases MER1342302
SK S49 unassigned subfamily S49B unassigned peptidases MER1353832
SK S49 unassigned subfamily S49B unassigned peptidases MER0113118 yberc0001_36980
SK S49 unassigned subfamily S49B unassigned peptidases MER0321296 yberc0001_14900
ST S54 unassigned family S54 unassigned peptidases MER1076051 glpG
U- U32 unassigned family U32 unassigned peptidases MER0403888
U- U69 unassigned family U69 unassigned peptidases MER0232373
U- U69 unassigned family U69 unassigned peptidases MER0275591 yberc0001_27550
U- U69 unassigned family U69 unassigned peptidases MER0195727

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Yersinia
Family Comment
C80 lineage specific expansion (5 homologues)
C82 significant decrease in homologues (1 homologues)
S8 significant decrease in homologues (1 homologues)

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Page created 8-September-2023

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