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Yersinia frederiksenii

Taxonomy
Taxonomy database identifier: 29484
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Yersinia
Species frederiksenii
Peptidase View peptidase sequences from Yersinia frederiksenii
Count of known and putative peptidases: 63, non-peptidase homologues 20
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0592500 lspA
AD A24 unassigned subfamily A24A unassigned peptidases MER0692781 AW19_4181
AD A24 unassigned subfamily A24A unassigned peptidases MER0688405 AW19_2320
AD A24 unassigned subfamily A24A unassigned peptidases MER1157768 outO
AD A24 unassigned subfamily A24A unassigned peptidases MER1157609
AD A24 unassigned subfamily A24A unassigned peptidases MER1157549
AD A24 unassigned subfamily A24A unassigned peptidases MER1157527
AD A24 unassigned subfamily A24A unassigned peptidases MER1157406
AD A24 unassigned subfamily A24A unassigned peptidases MER1157760
AD A24 unassigned subfamily A24A unassigned peptidases MER1157778
AD A24 unassigned subfamily A24A unassigned peptidases MER0262178 yfred0001_32740
AD A24 unassigned subfamily A24B unassigned peptidases MER0692475 AW19_2636
AE A31 A31.001 HybD peptidase MER0701523 hybD
AE A31 A31.003 HycI peptidase MER0427676
AE A31 unassigned family A31 unassigned peptidases MER0701378 hycI
AF A26 non-peptidase homologue family A26 non-peptidase homologues MER1159497
AF A26 non-peptidase homologue family A26 non-peptidase homologues MER1159499
AF A26 unassigned family A26 unassigned peptidases MER1159549 pla
AF A26 unassigned family A26 unassigned peptidases MER1159532
AF A26 unassigned family A26 unassigned peptidases MER1159482
AF A26 unassigned family A26 unassigned peptidases MER1159548
CA C39 C39.005 colicin V processing peptidase MER0369041 yfred0001_28130
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0715678 AW19_4125
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0445907
CA C39 unassigned family C39 unassigned peptidases MER0714232 AW19_1575
CA C39 unassigned family C39 unassigned peptidases MER0715281 AW19_3441
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0113070 pcp yfred0001_12090
CF C15 unassigned family C15 unassigned peptidases MER0697038 pcp
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0462179 yfred0001_6120
CL C82 unassigned subfamily C82A unassigned peptidases MER0742340 DJ58_1583
CL C82 unassigned subfamily C82A unassigned peptidases MER0737280 AW19_2205
CL C82 unassigned subfamily C82A unassigned peptidases MER0741614 AW19_1373
CO C40 C40.004 spr peptidase MER0452447
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0176559 yfred0001_5920
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0176597
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0377021 yfred0001_6260
G- G5 unassigned family G5 unassigned peptidases MER0936096 AW19_545/DJ58_3352
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0336030 yfred0001_41010
MA M3 M03.004 oligopeptidase A MER0112507
MA M3 unassigned family M3 unassigned peptidases MER0818128 AW19_604
MA M3 unassigned family M3 unassigned peptidases MER0465902
MA M10 unassigned subfamily M10B unassigned peptidases MER1209072 prtC
MA M10 unassigned subfamily M10B unassigned peptidases MER1209385 prtA
MA M10 unassigned subfamily M10B unassigned peptidases MER1209711
MA M10 unassigned subfamily M10B unassigned peptidases MER1209955
MA M10 unassigned subfamily M10B unassigned peptidases MER1209298
MA M10 unassigned subfamily M10B unassigned peptidases MER1209427
MA M10 unassigned subfamily M10B unassigned peptidases MER1209068
MA M10 unassigned subfamily M10B unassigned peptidases MER1209458
MA M10 unassigned subfamily M10B unassigned peptidases MER0188092 yfred0001_24850
MA M32 M32.004 TcMCP2 carboxypeptidase (Trypanosoma cruzi) MER0858278 AW19_1291
MA M32 unassigned family M32 unassigned peptidases MER1231895
MA M32 unassigned family M32 unassigned peptidases MER0176655 yfred0001_3640
MA M41 M41.001 FtsH peptidase MER0112838 ftsH yfred0001_21080
MA M48 M48.002 HtpX peptidase MER0296046 htpX yfred0001_5360
MA M48 M48.022 low osmolarity induced peptidase MER0885926 AW19_2398
MA M48 M48.022 low osmolarity induced peptidase MER0883951 DJ58_4070
MA M90 M90.001 MtfA peptidase MER0228575 mtfA yfred0001_6990
MC M14 M14.034 murein peptide amidase MpaA MER0836398 DJ58_2993
MC M14 M14.034 murein peptide amidase MpaA MER0836649 AW19_1313
MD M15 unassigned subfamily M15B unassigned peptidases MER0837679 AW19_327
MD M15 unassigned subfamily M15C unassigned peptidases MER0918867 AW19_3175
MD M15 unassigned subfamily M15C unassigned peptidases MER0188642 yfred0001_4110
MD M15 unassigned family M15 unassigned peptidases MER0469610
MD M74 M74.001 murein endopeptidase MER1261674 mepA
MD M74 M74.001 murein endopeptidase MER1236125 mepA
MD M74 M74.001 murein endopeptidase MER0112944 yfred0001_39180
MD M74 unassigned family M74 unassigned peptidases MER0595163
MD M74 unassigned family M74 unassigned peptidases MER1261266
ME M16 M16.001 pitrilysin MER0314936 yfred0001_32460
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0928394 yhjJ
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0176506
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0470908
MF M17 M17.003 PepA aminopeptidase MER0266462 pepA yfred0001_21680
MF M17 M17.004 PepB aminopeptidase MER0112706
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0230059 yfred0001_31730
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0234057 yfred0001_32220
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0482024
MG M24 M24.004 aminopeptidase P (bacteria) MER0113531 yfred0001_33260
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0163901
MG M24 unassigned subfamily M24A unassigned peptidases MER1241694
MG M24 unassigned subfamily M24B unassigned peptidases MER0904190
MH M20 M20.003 peptidase T MER0113314
MH M20 M20.007 Xaa-His dipeptidase MER0303513
MH M20 M20.010 DapE peptidase MER0475131
MH M20 M20.974 acetylornithine deacetylase ArgE MER0852127 argE
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0850606 DJ58_1570
MH M20 unassigned subfamily M20A unassigned peptidases MER1219811
MH M20 unassigned subfamily M20B unassigned peptidases MER0839239 pepT
MH M20 unassigned subfamily M20B unassigned peptidases MER0113225
MH M28 M28.005 IAP aminopeptidase MER1246233 ywaD
MH M28 M28.005 IAP aminopeptidase MER0190400 yfred0001_17730
MH M28 unassigned subfamily M28C unassigned peptidases MER1246187
MH M28 unassigned subfamily M28C unassigned peptidases MER1246214
MJ M38 M38.982 urease MER0045629 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872765 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0862868 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866310 DJ58_2140
MM M50 M50.004 RseP peptidase MER0892025 rseP
MO M23 M23.011 YebA peptidase MER0387207 yfred0001_1800
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0478994
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0477857 yfred0001_17880
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478318
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0164024
MU M103 M103.UNW family M103 non-peptidase homologues MER0112593 yfred0001_29410
NB N6 N06.003 EscU protein (Escherichia coli) MER0909528 AW19_3619
NB N6 N06.003 EscU protein (Escherichia coli) MER0326960
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294899 yfred0001_18150
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294900
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294751 yfred0001_7270
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294865 yfred0001_19610
PA S1 S01.260 B1598 peptidase MER0488568
PA S1 unassigned subfamily S1A unassigned peptidases MER0960145 AW19_1294
PA S1 unassigned subfamily S1B unassigned peptidases MER0954304 degS
PA S1 unassigned subfamily S1C unassigned peptidases MER0218705 yfred0001_17590
PA S1 unassigned subfamily S1C unassigned peptidases MER0327488 yfred0001_28960
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454573
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456064
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0459208
PB C59 unassigned family C59 unassigned peptidases MER0914018 AW19_2530
PB S45 S45.003 cephalosporin C acylase precursor MER1063782 AW19_952
PB T1 T01.006 HslV component of HslUV peptidase MER0237616 hslV yfred0001_24350
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0113677 yfred0001_14590
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436202
PC C26 C26.964 CTP synthetase MER0448574
PC C26 unassigned family C26 unassigned peptidases MER0441645
PC C26 unassigned family C26 unassigned peptidases MER0443275
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0163968
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0176003
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0176762
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385953 yfred0001_14830
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0386024 yfred0001_34700
SB S8 S08.043 HreP peptidase (Yersinia enterocolitica) MER0238653 yfred0001_7500
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290554 prcA
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290175 bprV
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290231
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290209
SB S8 unassigned subfamily S8A unassigned peptidases MER0979256 DJ58_3346
SB S8 unassigned subfamily S8A unassigned peptidases MER0978265 AW19_858
SB S8 unassigned subfamily S8B unassigned peptidases MER1289911
SB S8 unassigned subfamily S8B unassigned peptidases MER1289842
SC S9 S09.010 oligopeptidase B MER0229390 yfred0001_41500
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997682 DJ58_1023
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210158
SC S9 unassigned subfamily S9A unassigned peptidases MER0992616 AW19_1488
SC S9 unassigned subfamily S9B unassigned peptidases MER0997423 fghA
SC S9 unassigned subfamily S9C unassigned peptidases MER0997684 yjfP
SC S33 S33.001 prolyl aminopeptidase MER0112906 yfred0001_41470
SC S33 unassigned family S33 unassigned peptidases MER0210784
SC S33 unassigned family S33 unassigned peptidases MER0214086
SC S82 unassigned family S82 unassigned homologues MER0749951
SC S82 unassigned family S82 unassigned homologues MER0709253
SC S82 unassigned family S82 unassigned homologues MER0207387
SC S82 unassigned family S82 unassigned homologues MER0218587
SC S82 unassigned family S82 unassigned homologues MER0207842
SE S11 S11.002 murein-DD-endopeptidase MER0352282 yfred0001_10930
SE S11 S11.003 penicillin-binding protein 6 MER0176384 yfred0001_39880
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0981552 bla
SE S11 unassigned family S11 unassigned peptidases MER0948746 dacC
SE S11 unassigned family S11 unassigned peptidases MER0949053 pbpG
SE S11 unassigned family S11 unassigned peptidases MER0176080 yfred0001_13320
SE S12 S12.006 class C beta-lactamase MER0176152 blaB
SE S12 unassigned family S12 unassigned peptidases MER1003189 estB
SE S12 unassigned family S12 unassigned peptidases MER1027780 ampC
SE S12 unassigned family S12 unassigned peptidases MER1006911 AW19_1809
SE S12 unassigned family S12 unassigned peptidases MER1010285 DJ58_2291
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0113754
SF S24 S24.001 repressor LexA MER0304356
SF S24 unassigned family S24 unassigned peptidases MER1045235 c2
SF S24 unassigned family S24 unassigned peptidases MER1043330 ci
SF S24 unassigned family S24 unassigned peptidases MER1044867 ci
SF S26 S26.001 signal peptidase I MER0113453 yfred0001_36740
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0151006
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0151007 YfreA_01000299
SJ S16 S16.001 Lon-A peptidase MER0112839 lon yfred0001_15000
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0164135
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0472081
SJ S16 unassigned family S16 unassigned peptidases MER1324083
SK S14 S14.001 peptidase Clp (type 1) MER0299115
SK S14 unassigned family S14 unassigned peptidases MER1309451
SK S41 S41.001 C-terminal processing peptidase-1 MER0113226 yfred0001_5350
SK S49 unassigned subfamily S49A unassigned peptidases MER1342003
SK S49 unassigned subfamily S49B unassigned peptidases MER1066180 AW19_1163/DJ58_3140
SK S49 unassigned subfamily S49B unassigned peptidases MER1353852
SK S49 unassigned subfamily S49B unassigned peptidases MER1353563
SK S49 unassigned subfamily S49B unassigned peptidases MER0113109 yfred0001_1310
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0112454
U- U32 unassigned family U32 unassigned peptidases MER0403909
U- U69 unassigned family U69 unassigned peptidases MER0232298 yfred0001_44380
U- U69 unassigned family U69 unassigned peptidases MER0232299 yfred0001_44380
U- U69 unassigned family U69 unassigned peptidases MER0195621
U- U69 unassigned family U69 unassigned peptidases MER0195640
U- U69 unassigned family U69 unassigned peptidases MER0195516 yfred0001_9150
U- U69 unassigned family U69 unassigned peptidases MER0195586
U- U69 unassigned family U69 unassigned peptidases MER0259492 yfred0001_31870
U- U69 unassigned family U69 unassigned peptidases MER0195495 yfred0001_43430
U- U69 unassigned family U69 unassigned peptidases MER0195648 yfred0001_43350

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Yersinia
Family Comment
C39 lineage specific expansion (5 homologues)
C56 lineage specific expansion (5 homologues)
C82 lineage specific expansion (4 homologues)
M20 lineage specific expansion (8 homologues)
S11 lineage specific expansion (6 homologues)
S12 lineage specific expansion (5 homologues)
S45 significant presence (1 homologues)
S73 significant decrease in homologues (2 homologues)

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