Frankia sp. EAN1pec

Taxonomy
Taxonomy database identifier: 298653
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Actinomycetales
Suborder Frankineae
Family Frankiaceae
Genus Frankia
Species sp. EAN1pec
Peptidase View peptidase sequences from Frankia sp. EAN1pec
Count of known and putative peptidases: 98, non-peptidase homologues 31
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0051749 lspA Franean1_5087
AD A24 unassigned subfamily A24A unassigned peptidases MER0051706
AE A31 unassigned family A31 unassigned peptidases MER0051724 Franean1_2487
AE A31 unassigned family A31 unassigned peptidases MER0051730 Franean1_3406
CA C2 unassigned subfamily C2A unassigned peptidases MER0051756 Franean1_0117
CA C19 unassigned family C19 unassigned peptidases MER0480141 Franean1_1160
CF C15 non-peptidase homologue family C15 non-peptidase homologues MER0051725 Franean1_3440
CF C15 unassigned family C15 unassigned peptidases MER0292623 Franean1_3435
CL C60 unassigned subfamily C60A unassigned peptidases MER0051746
CL C60 unassigned family C60 unassigned peptidases MER0082604
CL C60 unassigned family C60 unassigned peptidases MER0082606
CL C82 unassigned subfamily C82A unassigned peptidases MER0461343 Franean1_5278
CL C82 unassigned subfamily C82A unassigned peptidases MER0461344 Franean1_7232
CO C40 C40.007 YddH peptidase MER0094225 Franean1_6731
CO C40 C40.007 YddH peptidase MER0094226 Franean1_6205
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0094224 Franean1_3074
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0094229 Franean1_2551
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0094230
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0094231 Franean1_7119
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0453232 Franean1_2750
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0094223 Franean1_3076
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0168712 Franean1_5004
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0169059 Franean1_5736
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0169094 Franean1_6528
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0177699 Franean1_7290
CO C40 unassigned family C40 unassigned peptidases MER0094227 Franean1_2747
CO C40 unassigned family C40 unassigned peptidases MER0177212 Franean1_3809
MA M4 M04.023 zpx peptidase MER0051747 Franean1_2045
MA M13 M13.009 Zmp1 peptidase (Mycobacterium-type) MER0089854 Franean1_3364
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0082610 ftsH Franean1_0298
MA M41 unassigned family M41 unassigned peptidases MER0051705
MA M41 unassigned family M41 unassigned peptidases MER0051726 ftsH Franean1_1984
MA M48 M48.004 HtpX-2 peptidase MER0051719 htpX1 Franean1_2532
MA M48 unassigned subfamily M48B unassigned peptidases MER0051716 htpX2 Franean1_6075
MA M48 unassigned subfamily M48B unassigned peptidases MER0082603
MA M48 unassigned subfamily M48B unassigned peptidases MER0051748 Franean1_6245
MD M15 M15.011 vanX D-Ala-D-Ala dipeptidase MER0051757 Franean1_7136
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0168120 Franean1_0932
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0051711 Franean1_0931
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0051710 Franean1_0932
ME M16 unassigned subfamily M16B unassigned peptidases MER0082598 Franean1_1190
MF M17 unassigned family M17 unassigned peptidases MER0082601 Franean1_0880
MF M17 unassigned family M17 unassigned peptidases MER0082595 Franean1_1781
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0082594 Franean1_1246
MG M24 unassigned subfamily M24A unassigned peptidases MER0051742 Franean1_6027
MG M24 unassigned subfamily M24A unassigned peptidases MER0051731 Franean1_1430
MG M24 unassigned subfamily M24A unassigned peptidases MER0051736 Franean1_5400
MH M20 unassigned family M20D unassigned peptidases MER0051741 Franean1_4239
MH M20 unassigned family M20D unassigned peptidases MER0051751 Franean1_5928
MH M20 unassigned family M20 unassigned peptidases MER0051709
MH M20 unassigned family M20 unassigned peptidases MER0051733 Franean1_0874
MM M50 non-peptidase homologue family M50 non-peptidase homologues MER0051750
MM M50 unassigned subfamily M50B unassigned peptidases MER0051707
MM M50 unassigned subfamily M50B unassigned peptidases MER0051735
MM M50 unassigned family M50 unassigned peptidases MER0051740
MO M23 unassigned subfamily M23B unassigned peptidases MER0051712 Franean1_5984
MP M67 M67.009 Mec peptidase MER0169013 Franean1_5654
MU M103 M103.UPW family M103 unassigned peptidases MER0051755
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0051703
PA S1 S01.513 MarP peptidase (Mycobacterium tuberculosis) MER0051753
PA S1 unassigned subfamily S1C unassigned peptidases MER0051708 Franean1_6331
PA S1 unassigned subfamily S1C unassigned peptidases MER0051732 Franean1_0886
PA S1 unassigned subfamily S1C unassigned peptidases MER0051734 Franean1_0866
PA S1 unassigned subfamily S1D unassigned peptidases MER0133945 Franean1_0821
PA S1 unassigned subfamily S1D unassigned peptidases MER0051760 Franean1_5547
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0120502 Franean1_7210
PB C44 C44.A08 glutamine-fructose-6-phosphate transaminase precursor (Dictyostelium discoideum) MER0117615 Franean1_6015
PB C44 unassigned family C44 unassigned peptidases MER0458001 Franean1_2293
PB T1 T01.005 bacterial proteasome, beta component MER0051739 prcB Franean1_4879
PB T1 T01.980 bacterial proteasome, alpha subunit MER0051738
PB T1 unassigned subfamily T1A unassigned peptidases MER1363550
PC C26 C26.959 TRP3 protein MER0438870 Franean1_0133
PC C26 C26.964 CTP synthetase MER0450603 pyrG Franean1_1754
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0447042 hisH Franean1_1919
PC C26 unassigned family C26 unassigned peptidases MER0451819 purQ Franean1_0158
PC C26 unassigned family C26 unassigned peptidases MER0443840 carA Franean1_1709
PC C26 unassigned family C26 unassigned peptidases MER0449705 Franean1_2398
PC C26 unassigned family C26 unassigned peptidases MER0449367
PC C56 C56.001 PfpI peptidase MER0051758 Franean1_5584
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0143537 Franean1_5345
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0168367 Franean1_2856
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0169410 Franean1_6224
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0051717
PE T5 T05.001 ornithine acetyltransferase precursor MER0119580 argJ2 Franean1_4506
PE T5 unassigned family T5 unassigned peptidases MER0117687 argJ1 Franean1_1738
SB S8 S08.051 aqualysin 1 MER0051713 Franean1_2368
SB S8 unassigned subfamily S8A unassigned peptidases MER0082608
SB S8 unassigned subfamily S8A unassigned peptidases MER0167963 Franean1_0787
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214260 Franean1_3483
SC S9 unassigned subfamily S9A unassigned peptidases MER0082611 Franean1_5550
SC S9 unassigned family S9 unassigned peptidases MER0051718 Franean1_2294
SC S15 unassigned family S15 unassigned peptidases MER0051737
SC S15 unassigned family S15 unassigned peptidases MER0055485
SC S15 unassigned family S15 unassigned peptidases MER0052435
SC S15 unassigned family S15 unassigned peptidases MER0051745
SC S15 unassigned family S15 unassigned peptidases MER0051759 Franean1_6822
SC S33 S33.009 Mername-AA086 putative peptidase MER0213569 Franean1_0093
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215572 Franean1_1644
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213502 Franean1_2021
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210832 Franean1_2175
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214735 Franean1_3329
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213311 Franean1_3350
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214755 Franean1_3934
SC S33 unassigned family S33 unassigned peptidases MER0119645 Franean1_2496
SC S33 unassigned family S33 unassigned peptidases MER0210916 Franean1_1649
SC S33 unassigned family S33 unassigned peptidases MER0117659 Franean1_2894
SC S33 unassigned family S33 unassigned peptidases MER0211009 Franean1_2945
SC S33 unassigned family S33 unassigned peptidases MER0209525 Franean1_4117
SC S33 unassigned family S33 unassigned peptidases MER0214167 Franean1_4620
SC S33 unassigned family S33 unassigned peptidases MER0213883 Franean1_4636
SE S11 unassigned family S11 unassigned peptidases MER0082607 Franean1_5965
SE S12 unassigned family S12 unassigned peptidases MER0126263 Franean1_7012
SE S12 unassigned family S12 unassigned peptidases MER0421857 Franean1_5968
SE S12 unassigned family S12 unassigned peptidases MER0177598 Franean1_6417
SE S13 S13.004 penillin-binding protein 4 MER0051754 Franean1_0301
SF S24 S24.001 repressor LexA MER0051720 lexA Franean1_1232
SF S26 S26.025 signal peptidase sipX MER0051722
SF S26 S26.026 PA1303 peptidase (Pseudomonas sp.) MER0082602
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0473296 Franean1_0943
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475248 Franean1_0359
SJ S16 unassigned family S16 unassigned peptidases MER0051704 Franean1_5508
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0051715 clpP2 Franean1_4919
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0051729 clpP4 Franean1_5273
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0051714 clpP3 Franean1_4920
SK S14 unassigned family S14 unassigned peptidases MER0051728 clpP5 Franean1_5274
SK S14 unassigned family S14 unassigned peptidases MER0051752 clpP Franean1_0015
SK S49 unassigned subfamily S49A unassigned peptidases MER0082596 Franean1_0806
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0110729 Franean1_4977
U- U56 U56.001 homomultimeric peptidase MER0139438 Franean1_2248
U- U72 U72.001 Dop isopeptidase MER0402659
U- U72 U72.001 Dop isopeptidase MER0400072

GENOME ANALYSIS: Comparison with 12 completely sequenced genomes from suborder Frankineae
Family Comment
C15 significant presence (2 homologues)
C19 significant presence (1 homologues)
C40 lineage specific expansion (14 homologues)
S14 lineage specific expansion (5 homologues)
U56 significant presence (1 homologues)