Hydrogenivirga sp. 128-5-R1-1

Taxonomy
Taxonomy database identifier: 392423
Superkingdom		Bacteria
Phylum		Aquificae
Order		Aquificales
Family		Aquificaceae
Genus		Hydrogenivirga
Species		sp. 128-5-R1-1
Peptidase			View peptidase sequences from Hydrogenivirga sp. 128-5-R1-1
Count of known and putative peptidases: 48, non-peptidase homologues 13
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AC	A8	unassigned	family A8 unassigned peptidases	MER0137527	lspA2	HG1285_04518
AC	A8	unassigned	family A8 unassigned peptidases	MER0138102	lspA1	HG1285_18539
AD	A24	A24.019	ComC peptidase	MER0136885		HG1285_12152
AD	A24	non-peptidase homologue	subfamily A24A non-peptidase homologues	MER0172190		HG1285_08889
AE	A31	unassigned	family A31 unassigned peptidases	MER0141396		HG1285_12552
AE	A31	unassigned	family A31 unassigned peptidases	MER0137920		HG1285_17175
CA	C39	unassigned	family C39 unassigned peptidases	MER0446023		HG1285_18809
MA	M3	unassigned	subfamily M3A unassigned peptidases	MER0142069		HG1285_07592
MA	M4	unassigned	family M4 unassigned peptidases	MER0142070		HG1285_01110
MA	M6	unassigned	family M6 unassigned peptidases	MER0162003		HG1285_17759
MA	M41	M41.021	FtsH peptidase (Thermotoga-type)	MER0172030	ftsH	HG1285_14419
MA	M41	unassigned	family M41 unassigned peptidases	MER0120397	ftsH2	HG1285_07739
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0117751	htpX2	HG1285_08121
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0120398	htpX1	HG1285_08759
MA	M54	unassigned	family M54 unassigned peptidases	MER0162190		HG1285_18534
ME	M16	non-peptidase homologue	family M16 non-peptidase homologues	MER0162124		HG1285_18174
ME	M16	non-peptidase homologue	family M16 non-peptidase homologues	MER0162125		HG1285_18174
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0125497		HG1285_18164
MF	M17	M17.016	aminopeptidase A/I (Helicobacter-type)	MER0126663		HG1285_10405
MF	M17	unassigned	family M17 unassigned peptidases	MER0171841	pepA	HG1285_16071
MG	M24	non-peptidase homologue	subfamily M24A non-peptidase homologues	MER0487057
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0172078	map	HG1285_13942
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0396397		HG1285_17260
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0472416
MH	M20	unassigned	family M20D unassigned peptidases	MER0137041		HG1285_12352
MH	M20	unassigned	family M20 unassigned peptidases	MER0370390		HG1285_11043
MH	M28	unassigned	subfamily M28F unassigned peptidases	MER0144151		HG1285_08336
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0873826	HG1285_01408
MJ	M38	unassigned	family M38 unassigned peptidases	MER0869078	pyrC
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0898592	HG1285_05915
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0892555	HG1285_09291
MM	M50	unassigned	subfamily M50A unassigned peptidases	MER0897678	HG1285_16036
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0897143	HG1285_04548
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0163205		HG1285_18966
MO	M23	M23.014	ShyA D,D-endopeptidase (Vibrio cholerae)	MER0389553		HG1285_10170
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479294
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0189790		HG1285_09001
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0161880		HG1285_03578
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0162260		HG1285_05665
MO	M23	unassigned	subfamily M23B unassigned peptidases	MER0189789		HG1285_15271
MP	M67	unassigned	subfamily M67B unassigned peptidases	MER0907807	HG1285_09421
MP	M67	unassigned	subfamily M67B unassigned peptidases	MER0162522		HG1285_16835
MU	M103	M103.UNW	family M103 non-peptidase homologues	MER0142071		HG1285_02098
MU	M103	M103.UPW	family M103 unassigned peptidases	MER0143169		HG1285_15721
NB	N6	N06.A01	FlhB protein (Escherichia coli)	MER0327375
PA	S1	S01.494	Htra2 peptidase (Mycobacterium-type)	MER0407246	HG1285_12782
PA	S1	S01.500	HtrA peptidase (Helicobacter-type)	MER0407274
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0407929
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0126537		HG1285_02633
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0458876
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0171793
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0458877
PB	C44	unassigned	family C44 unassigned peptidases	MER0137138		HG1285_09181
PB	T1	T01.007	CodW component of CodWX peptidase	MER0323759
PB	T1	unassigned	subfamily T1B unassigned peptidases	MER0122082	hslV	HG1285_03718
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0125031		HG1285_01528
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0436049
PC	C26	C26.957	GMP synthase	MER0442148
PC	C26	C26.959	TRP3 protein	MER0439430
PC	C26	C26.964	CTP synthetase	MER0447141
PC	C26	unassigned	family C26 unassigned peptidases	MER0443649
PC	C26	unassigned	family C26 unassigned peptidases	MER0439536
PC	C26	unassigned	family C26 unassigned peptidases	MER0451041
PC	C56	C56.975	ES1 protein homolog, mitochondrial	MER0179818
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0126430		HG1285_17125
PD	N10	N10.002	intein-containing replicative DNA helicase precursor	MER0223681		HG1285_08126
PD	N10	unassigned	family N10 unassigned peptide lyases	MER0195416		HG1285_16385
PD	N11	unassigned	family N11 unassigned peptide lyases	MER0180176		HG1285_04228
PE	T5	unassigned	family T5 unassigned peptidases	MER0120305	argJ	HG1285_00770
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0162333		HG1285_06325
SC	S9	S09.A97	vegetative specific protein h5 (Dictyostelium discoideum)	MER0210771
SC	S33	unassigned	family S33 unassigned peptidases	MER0210740
SF	S26	S26.025	signal peptidase sipX	MER0117879		HG1285_12987
SF	S26	S26.025	signal peptidase sipX	MER0143469		HG1285_15296
SJ	S16	S16.001	Lon-A peptidase	MER0126742		HG1285_15144
SJ	S16	S16.001	Lon-A peptidase	MER0162978		HG1285_12242
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0475464
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0479155
SJ	S16	non-peptidase homologue	family S16 non-peptidase homologues	MER1034259	HG1285_12422
SK	S14	S14.001	peptidase Clp (type 1)	MER0140822	clpP	HG1285_03108
SK	S14	S14.001	peptidase Clp (type 1)	MER0359551		HG1285_07809
SK	S14	unassigned	family S14 unassigned peptidases	MER1319140
SK	S41	S41.004	C-terminal processing peptidase-3	MER0117994		HG1285_06345
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER1066327	HG1285_05800
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER1070854	HG1285_07996
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER0122236		HG1285_01513
SK	S49	unassigned	subfamily S49A unassigned peptidases	MER1352558
SK	S49	unassigned	subfamily S49C unassigned peptidases	MER1072494	HG1285_06135
ST	S54	unassigned	family S54 unassigned peptidases	MER1077453	HG1285_00080
ST	S54	unassigned	family S54 unassigned peptidases	MER1076818	HG1285_07874
U-	U56	unassigned	family U56 unassigned peptidases	MER0171938		HG1285_00920

GENOME ANALYSIS: Comparison with 9 completely sequenced genomes from family Aquificaceae
Family	Comment
C26	lineage specific expansion (7 homologues)
C44	lineage specific expansion (5 homologues)
M3	significant presence (1 homologues)
M4	significant presence (1 homologues)
M6	significant presence (1 homologues)
M23	lineage specific expansion (6 homologues)
M50	lineage specific expansion (5 homologues)
N10	significant presence (2 homologues)
S16	lineage specific expansion (5 homologues)
S49	lineage specific expansion (5 homologues)
T3	significant presence (1 homologues)