Clostridium scindens

Taxonomy
Taxonomy database identifier: 29347
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species scindens
Peptidase View peptidase sequences from Clostridium scindens
Count of known and putative peptidases: 57, non-peptidase homologues 12
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0237949 CLOSCI_03744
AC A8 unassigned family A8 unassigned peptidases MER0122258 lspA CLOSCI_00503
AD A24 A24.019 ComC peptidase MER0143471 CLOSCI_02288
AD A24 unassigned family A24 unassigned peptidases MER0427081
AE A25 A25.001 gpr peptidase MER0184820 gpr CLOSCI_00397
CL C60 C60.002 sortase B MER0139180 CLOSCI_03200
CL C60 C60.003 sortase C2 MER0140055 CLOSCI_00872
CL C60 C60.003 sortase C2 MER0139372 CLOSCI_01604
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0144479 CLOSCI_01048
CL C60 unassigned subfamily C60B unassigned peptidases MER0299932
CL C82 unassigned subfamily C82A unassigned peptidases MER0186443 CLOSCI_00739
CO C40 C40.007 YddH peptidase MER0142779 CLOSCI_02962
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0123034 CLOSCI_02963
CO C40 unassigned family C40 unassigned peptidases MER0117892 CLOSCI_02643
CO C40 unassigned family C40 unassigned peptidases MER0453779
G- G5 unassigned family G5 unassigned peptidases MER0938679 CLOSCI_01413
G- G5 unassigned family G5 unassigned peptidases MER0912678 CLOSCI_02959
G- G5 unassigned family G5 unassigned peptidases MER0935784 CLOSCI_03811
MA M41 unassigned family M41 unassigned peptidases MER0137047 ftsH1 CLOSCI_01995
MA M41 unassigned family M41 unassigned peptidases MER0164589 CLOSCI_03669
MA M56 unassigned family M56 unassigned peptidases MER0119957 CLOSCI_02046
MA M78 unassigned family M78 unassigned peptidases MER0909561 CLOSCI_03288
MD M15 unassigned subfamily M15D unassigned peptidases MER0118761 CLOSCI_00880
ME M16 unassigned subfamily M16C unassigned peptidases MER0138892 CLOSCI_01579
MG M24 unassigned subfamily M24A unassigned peptidases MER0122823 CLOSCI_02203
MG M24 unassigned subfamily M24A unassigned peptidases MER0137341 CLOSCI_02000
MG M24 unassigned subfamily M24B unassigned peptidases MER0481920
MG M24 unassigned subfamily M24B unassigned peptidases MER0481921
MG M24 unassigned subfamily M24B unassigned peptidases MER0396414 CLOSCI_03552
MH M18 unassigned family M18 unassigned peptidases MER0119497 CLOSCI_03496
MH M18 unassigned family M18 unassigned peptidases MER0117893 CLOSCI_01568
MH M18 unassigned family M18 unassigned peptidases MER0117291 CLOSCI_01637
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474745
MH M20 unassigned subfamily M20A unassigned peptidases MER0126378 CLOSCI_02885
MH M20 unassigned subfamily M20C unassigned peptidases MER0189282 CLOSCI_00457
MH M20 unassigned family M20D unassigned peptidases MER0474683
MH M20 unassigned family M20D unassigned peptidases MER0373208 CLOSCI_01820
MJ M19 unassigned family M19 unassigned peptidases MER0122340 CLOSCI_02994
MJ M19 unassigned family M19 unassigned peptidases MER0118378 CLOSCI_01778
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0873073 nagA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868184 hydA
MJ M38 unassigned family M38 unassigned peptidases MER0143263 CLOSCI_02913
MM M50 unassigned subfamily M50B unassigned peptidases MER0897459 rseP
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0142778 CLOSCI_02962
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0175578 CLOSCI_00458
MO M23 unassigned subfamily M23B unassigned peptidases MER0138891 CLOSCI_04054
MO M23 unassigned subfamily M23B unassigned peptidases MER0189802 CLOSCI_00720
MO M23 unassigned subfamily M23B unassigned peptidases MER0189803 CLOSCI_01053
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0856440 CLOSCI_04065
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0217948 CLOSCI_03172
PA S1 unassigned subfamily S1B unassigned peptidases MER0407798
PA S55 S55.001 SpoIVB peptidase MER0140324 CLOSCI_00434
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0122341 CLOSCI_00780
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458905
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0120252 CLOSCI_00153
PC C26 C26.964 CTP synthetase MER0450173
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0443804
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0441285
PC C26 unassigned family C26 unassigned peptidases MER0445172
PC C26 unassigned family C26 unassigned peptidases MER0441946
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0138989 CLOSCI_03699
PE T5 T05.002 ArgJ protein (archea) MER0141123 CLOSCI_01769
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0974427 CLOSCI_00341
SB S8 unassigned subfamily S8A unassigned peptidases MER0136481 CLOSCI_01318
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0478804 CLOSCI_03946
SC S33 unassigned family S33 unassigned peptidases MER0119956 CLOSCI_03549
SC S33 unassigned family S33 unassigned peptidases MER0119065 CLOSCI_00615
SE S11 S11.004 K15-type DD-transpeptidase MER0118545 CLOSCI_01389
SE S11 S11.004 K15-type DD-transpeptidase MER0175633 CLOSCI_00510
SE S11 S11.004 K15-type DD-transpeptidase MER0173475 CLOSCI_03055
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0351065 CLOSCI_01385
SE S11 unassigned family S11 unassigned peptidases MER0352533 CLOSCI_02630
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER1027617 CLOSCI_03656
SE S12 unassigned family S12 unassigned peptidases MER1006822 CLOSCI_00244
SF S24 S24.001 repressor LexA MER0126751 lexA CLOSCI_00491
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0139861 CLOSCI_03411
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1048072 lepB
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1051062 lepB
SF S26 unassigned subfamily S26A unassigned peptidases MER0143074 CLOSCI_01328
SF S26 unassigned subfamily S26A unassigned peptidases MER0246878 CLOSCI_01326
SF S26 unassigned subfamily S26A unassigned peptidases MER0246945 CLOSCI_02629
SF S26 unassigned subfamily S26B unassigned peptidases MER1052832 CLOSCI_01041
SJ S16 S16.001 Lon-A peptidase MER0117430 CLOSCI_03704
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1032296 CLOSCI_00044
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1040004 radA
SK S14 S14.001 peptidase Clp (type 1) MER0120480 clpP CLOSCI_03702
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1016147 clpP
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0360215 CLOSCI_00205
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0173135 CLOSCI_00549
SK S14 unassigned family S14 unassigned peptidases MER1015567 CLOSCI_00605
SK S41 S41.004 C-terminal processing peptidase-3 MER0119496 CLOSCI_04055
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER1071314 clpP
SK S49 unassigned subfamily S49B unassigned peptidases MER0120559 CLOSCI_03571
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0125961 CLOSCI_00595
ST S54 unassigned family S54 unassigned peptidases MER0111486 CLOSCI_02667
U- U32 U32.002 collagenase (Helicobacter-type) MER0141505 CLOSCI_00035
U- U32 unassigned family U32 unassigned peptidases MER0126750 CLOSCI_01374

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment