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information

Oxalobacter formigenes

Taxonomy
Taxonomy database identifier: 847
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Order Burkholderiales
Family Oxalobacteraceae
Genus Oxalobacter
Species formigenes
Peptidase View peptidase sequences from Oxalobacter formigenes
Count of known and putative peptidases: 60, non-peptidase homologues 14
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER1153211 lspA
AC A8 unassigned family A8 unassigned peptidases MER0225188 lspA OFAG_02073
AC A8 unassigned family A8 unassigned peptidases MER1154701
AC A8 unassigned family A8 unassigned peptidases MER0232437
AD A24 unassigned family A24 unassigned peptidases MER0236732 OFBG_01788
CA C93 unassigned family C93 unassigned peptidases MER0392397
CA C93 unassigned family C93 unassigned peptidases MER0152682 OFBG_00146
CO C40 C40.006 PgpA peptidase MER0377088 OFBG_00242
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335345 OFAG_01219
MA M3 unassigned subfamily M3A unassigned peptidases MER0818750 prlC
MA M3 unassigned subfamily M3A unassigned peptidases MER0338871
MA M3 unassigned family M3 unassigned peptidases MER0239205 OFAG_01922
MA M3 unassigned family M3 unassigned peptidases MER0333424
MA M41 M41.001 FtsH peptidase MER0877687 ftsH
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0363508 ftsH OFAG_00774
MA M41 unassigned family M41 unassigned peptidases MER0229611 ftsH1 OFAG_00279
MA M41 unassigned family M41 unassigned peptidases MER0363424 ftsH OFBG_00732
MA M48 M48.002 HtpX peptidase MER0277293 htpX OFAG_00270
MA M48 M48.002 HtpX peptidase MER0277448 htpX OFBG_01172
MA M48 M48.A01 At5g51740 (Arabidopsis thaliana)-type peptidase MER0886590 OFAG_01464
MA M48 M48.A01 At5g51740 (Arabidopsis thaliana)-type peptidase MER0888653 OFBG_01499
MA M48 non-peptidase homologue family M48 non-peptidase homologues MER0888716 OFBG_00044
MA M48 unassigned subfamily M48A unassigned peptidases MER0190860 OFAG_01626
MA M48 unassigned subfamily M48A unassigned peptidases MER0295609 OFBG_01665
MA M48 unassigned subfamily M48C unassigned peptidases MER0889235 OFBG_01258
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0191108 OFAG_01737
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0191109 OFBG_01781
ME M16 M16.019 YMXG peptidase MER0390388 OFAG_02027
ME M16 M16.019 YMXG peptidase MER0390657 OFBG_02061
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0921349 OFAG_02028
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0830866 OFBG_02062
MF M17 M17.003 PepA aminopeptidase MER0289554 pepA OFAG_00010
MF M17 M17.003 PepA aminopeptidase MER0289585 pepA OFBG_00090
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0318964 map OFAG_00125
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0318967 map OFBG_00209
MG M24 unassigned subfamily M24B unassigned peptidases MER0482015
MG M24 unassigned subfamily M24B unassigned peptidases MER0482016
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0851523 OFBG_00364
MH M20 unassigned subfamily M20A unassigned peptidases MER0844882 dapE
MH M20 unassigned subfamily M20A unassigned peptidases MER0473562
MH M20 unassigned subfamily M20C unassigned peptidases MER0229617 OFAG_00220
MH M20 unassigned subfamily M20C unassigned peptidases MER1235915
MM M50 unassigned subfamily M50B unassigned peptidases MER0891015 OFAG_00272
MM M50 unassigned subfamily M50B unassigned peptidases MER0891435 OFBG_01170
MM M50 unassigned family M50 unassigned peptidases MER0894782 OFAG_00197
MM M50 unassigned family M50 unassigned peptidases MER0896434 rseP
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0477865
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479461
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478014
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479975
MO M23 unassigned subfamily M23B unassigned peptidases MER0387260 OFAG_01422
MO M23 unassigned subfamily M23B unassigned peptidases MER0387457 OFBG_01449
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0329681 OFBG_01676
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0241165 pmbA OFBG_01966
MU M103 M103.UNW family M103 non-peptidase homologues MER0239635 OFAG_01931
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294934 OFAG_00633
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294792
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294764 OFAG_01124
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294848 OFAG_01159
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294777 OFBG_00452
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294840 OFBG_00968
PA S1 S01.274 DegQ peptidase MER0406919
PA S1 unassigned subfamily S1B unassigned peptidases MER0964238 mucD
PA S1 unassigned subfamily S1C unassigned peptidases MER0208169 OFAG_01840
PA S1 unassigned subfamily S1C unassigned peptidases MER0206059 OFBG_01883
PA S1 unassigned subfamily S1E unassigned peptidases MER0406804
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456049
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459196
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0459197
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456050
PB C44 unassigned family C44 unassigned peptidases MER0456052
PB C59 unassigned family C59 unassigned peptidases MER0914525 OFBG_01414
PB C59 unassigned family C59 unassigned peptidases MER0411099
PB T1 T01.006 HslV component of HslUV peptidase MER0323630
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0379089 ggt OFBG_01438
PB T3 unassigned family T3 unassigned peptidases MER1098266 OFAG_01411
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436191
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0436192
PC C26 C26.964 CTP synthetase MER0449674
PC C26 C26.964 CTP synthetase MER0449316
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0442895
PC C26 C26.A07 At1g63660 (Arabidopsis thaliana) MER0443042
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439154
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439421
PC C26 unassigned family C26 unassigned peptidases MER0440246
PC C26 unassigned family C26 unassigned peptidases MER0445324
PC C26 unassigned family C26 unassigned peptidases MER0444256
PC C26 unassigned family C26 unassigned peptidases MER0446341
PC C26 unassigned family C26 unassigned peptidases MER0439993
PC C26 unassigned family C26 unassigned peptidases MER0444987
PE T5 T05.001 ornithine acetyltransferase precursor MER0307520 argJ OFAG_01602
SB S8 unassigned subfamily S8A unassigned peptidases MER0982221 OFAG_00987
SB S8 unassigned subfamily S8A unassigned peptidases MER0983241 OFBG_00474
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0214745
SC S9 unassigned family S9 unassigned peptidases MER0209071
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215559
SC S33 unassigned family S33 unassigned peptidases MER0211313
SC S33 unassigned family S33 unassigned peptidases MER0211268
SE S11 S11.002 murein-DD-endopeptidase MER0352674 OFBG_00201
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0983503 OFAG_00904
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0351771 OFAG_01794
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0352042 OFBG_01838
SE S11 unassigned family S11 unassigned peptidases MER0950068 OFAG_00902
SE S11 unassigned family S11 unassigned peptidases MER0950513 OFBG_00688
SE S11 unassigned family S11 unassigned peptidases MER0973783 OFBG_00689
SE S11 unassigned family S11 unassigned peptidases MER0352494
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0354775 OFBG_00595
SE S12 unassigned family S12 unassigned peptidases MER0354272 OFAG_00542
SE S12 unassigned family S12 unassigned peptidases MER0354766 OFBG_01018
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0275282 OFAG_01947
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0298599
SF S24 S24.001 repressor LexA MER0304437 lexA OFBG_01095
SF S24 S24.003 UmuD protein MER0375463 OFBG_00355
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1029731 OFAG_00697
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1041188 OFBG_00762
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1040573 OFBG_00834
SF S24 unassigned family S24 unassigned peptidases MER1029123 OFAG_00992
SF S24 unassigned family S24 unassigned peptidases MER1043221 OFBG_00626
SF S26 S26.001 signal peptidase I MER0287672 OFAG_01312
SF S26 S26.001 signal peptidase I MER0265725 lepB OFBG_01335
SF S26 unassigned subfamily S26A unassigned peptidases MER1334045
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0322562
SJ S16 S16.001 Lon-A peptidase MER0476195
SJ S16 S16.001 Lon-A peptidase MER0299785
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475521
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0476807
SJ S16 unassigned family S16 unassigned peptidases MER1325426
SJ S16 unassigned family S16 unassigned peptidases MER0360689 lon OFAG_00019
SJ S16 unassigned family S16 unassigned peptidases MER0360865 lon OFBG_00099
SK S14 S14.001 peptidase Clp (type 1) MER0299219
SK S14 S14.001 peptidase Clp (type 1) MER0491506
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER1013529 clpP
SK S41 S41.004 C-terminal processing peptidase-3 MER0337962 OFAG_01647
SK S41 S41.004 C-terminal processing peptidase-3 MER0337887 OFBG_01686
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1067870 clpP
SK S49 unassigned subfamily S49B unassigned peptidases MER0321413 OFBG_00885
SK S49 unassigned family S49 unassigned peptidases MER0493468
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0320272
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0320277 idcA OFBG_01115
U- U32 unassigned family U32 unassigned peptidases MER0403829
U- U32 unassigned family U32 unassigned peptidases MER0403906
U- U32 unassigned family U32 unassigned peptidases MER0404162
U- U69 unassigned family U69 unassigned peptidases MER0238608 OFBG_00485
U- U69 unassigned family U69 unassigned peptidases MER0238609 OFBG_00485

GENOME ANALYSIS: Comparison with 20 completely sequenced genomes from family Oxalobacteraceae
Family Comment
C26 lineage specific expansion (14 homologues)
C40 significant decrease in homologues (1 homologues)
C59 significant presence (2 homologues)
C93 significant presence (2 homologues)
M23 lineage specific expansion (6 homologues)
M41 lineage specific expansion (4 homologues)
M48 lineage specific expansion (8 homologues)
M50 lineage specific expansion (4 homologues)
N4 significant presence (6 homologues)
S9 significant decrease in homologues (2 homologues)
S11 lineage specific expansion (8 homologues)
S16 lineage specific expansion (7 homologues)
S24 lineage specific expansion (7 homologues)
S73 significant presence (1 homologues)
U32 significant presence (3 homologues)
U69 significant presence (2 homologues)

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