Desulfovibrio magneticus

Taxonomy
Taxonomy database identifier: 184917
Superkingdom Bacteria
Phylum Proteobacteria
Class Deltaproteobacteria
Order Desulfovibrionales
Family Desulfovibrionaceae
Genus Desulfovibrio
Species magneticus
Peptidase View peptidase sequences from Desulfovibrio magneticus
Count of known and putative peptidases: 84, non-peptidase homologues 51
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0182253 lspA DMR_22180
AC A8 unassigned family A8 unassigned peptidases MER1155672
AD A24 A24.019 ComC peptidase MER0182311 B193_2507/gspO DMR_32960
AD A24 non-peptidase homologue subfamily A24A non-peptidase homologues MER1158324
AD A24 unassigned subfamily A24A unassigned peptidases MER0182315 B193_3604 DMR_35040
AE A31 unassigned family A31 unassigned peptidases MER0182218 DMR_15590
CA C1 unassigned subfamily C1A unassigned peptidases MER0182310 DMR_31980
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0715093 DMR_03070
CD C13 unassigned family C13 unassigned peptidases MER0182352 DMR_45810
CD C14 unassigned subfamily C14B unassigned peptidases MER0182273 DMR_25970
CL C82 unassigned subfamily C82A unassigned peptidases MER0182258 DMR_23040
CL C82 unassigned subfamily C82A unassigned peptidases MER0182356 DMR_46240
CL C82 unassigned subfamily C82A unassigned peptidases MER0740280 B193_0884
CO C40 C40.006 PgpA peptidase MER0182233 DMR_17960
CO C40 C40.006 PgpA peptidase MER0182336 DMR_42350
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0182321
CO C40 unassigned family C40 unassigned peptidases MER0182259 DMR_23060
CO C40 unassigned family C40 unassigned peptidases MER0720295 B193_0886
MA M1 unassigned family M1 unassigned peptidases MER0182245 DMR_20890
MA M1 unassigned family M1 unassigned peptidases MER0813322 B193_1012
MA M10 non-peptidase homologue family M10 non-peptidase homologues MER0182313 DMR_34230
MA M32 unassigned family M32 unassigned peptidases MER0182237 DMR_19440
MA M32 unassigned family M32 unassigned peptidases MER1259693
MA M41 unassigned family M41 unassigned peptidases MER0182270 ftsH DMR_25740
MA M41 unassigned family M41 unassigned peptidases MER0182307 ftsH DMR_31250
MA M48 unassigned subfamily M48B unassigned peptidases MER0182194 htpX DMR_06480
MA M48 unassigned subfamily M48C unassigned peptidases MER0182267 DMR_24530
MA M48 unassigned subfamily M48C unassigned peptidases MER0182300 DMR_29480
MD M15 unassigned subfamily M15D unassigned peptidases MER0182189 DMR_05000
ME M16 M16.012 PreP1 peptidase (Arabidopsis-type) MER0182340 DMR_43100
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0182279 DMR_26760
ME M16 unassigned subfamily M16B unassigned peptidases MER0182278 DMR_26760
ME M16 unassigned subfamily M16B unassigned peptidases MER0182325 DMR_38350
ME M16 unassigned subfamily M16B unassigned peptidases MER0927684 B193_2627
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0182249 DMR_21480
MG M24 unassigned subfamily M24A unassigned peptidases MER0182211 map DMR_12410
MG M24 unassigned subfamily M24B unassigned peptidases MER0182210 DMR_11590
MH M18 unassigned family M18 unassigned peptidases MER0182305 DMR_30560
MH M20 unassigned family M20D unassigned peptidases MER0182282 DMR_27560
MH M20 unassigned family M20 unassigned peptidases MER0182276 DMR_26040
MH M20 unassigned family M20 unassigned peptidases MER0410231
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0182173 pyrC DMR_00710
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0182216 guaD DMR_15390
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0182251 ade DMR_21960
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0182275 mtaD DMR_26020
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0891080 B193_1493
MM M50 unassigned subfamily M50B unassigned peptidases MER0182186 DMR_03850
MM M50 unassigned subfamily M50B unassigned peptidases MER0182306 DMR_30590
MM M50 unassigned subfamily M50B unassigned peptidases MER0893759 DMR_25400
MO M23 M23.011 YebA peptidase MER0182344 DMR_44140
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0182230 DMR_17670
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0182287 DMR_28240
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0182234 DMR_18130
MO M23 unassigned subfamily M23B unassigned peptidases MER0182266 DMR_23850
MO M23 unassigned subfamily M23B unassigned peptidases MER0182284 DMR_28080
MO M23 unassigned subfamily M23B unassigned peptidases MER0182308 DMR_31520
MQ M29 unassigned family M29 unassigned peptidases MER0182243 DMR_20750
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405726 flhB DMR_23870
PA S1 S01.273 DegP peptidase MER0182333 DMR_41070
PA S1 unassigned subfamily S1B unassigned peptidases MER0965714 B193_3166
PA S1 unassigned subfamily S1C unassigned peptidases MER0182220 DMR_15870
PA S1 unassigned subfamily S1C unassigned peptidases MER0182331 DMR_39660 DMR_39660
PA S1 unassigned subfamily S1C unassigned peptidases MER0182334 mamE DMR_41080
PA S1 unassigned subfamily S1C unassigned peptidases MER0182299 B193_1365 DMR_29410
PA S1 unassigned subfamily S1C unassigned peptidases MER0904767 B193_1306
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0182252 purF DMR_22150
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0182338 DMR_42760
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0182339 DMR_42790
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0182172 DMR_00560
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0182343 glmS DMR_43340
PB C44 unassigned family C44 unassigned peptidases MER0182354 DMR_46020
PB C59 C59.001 penicillin V acylase precursor MER0182302 DMR_29580
PB C59 C59.001 penicillin V acylase precursor MER0182337 DMR_42620
PB C59 unassigned family C59 unassigned peptidases MER0913667 B193_2154
PB T1 T01.007 CodW component of CodWX peptidase MER0182326 hslV DMR_38370
PB T1 unassigned family T1 unassigned peptidases MER0182288 DMR_28720
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0182190 trpG DMR_05310
PC C26 C26.957 GMP synthase MER0182255 guaA DMR_22390
PC C26 C26.964 CTP synthetase MER0182271 pyrG DMR_25890
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0182181 DMR_02680
PC C26 non-peptidase homologue family C26 non-peptidase homologues MER0182183 DMR_03630
PC C26 unassigned family C26 unassigned peptidases MER0182195 DMR_07640
PC C26 unassigned family C26 unassigned peptidases MER0182242 carA DMR_20320
PC C26 unassigned family C26 unassigned peptidases MER0182247 hisH DMR_21050
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0182272 purQ DMR_25900
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0182246 DMR_20940
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0182217 DMR_15560
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0182309 DMR_31840
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0182349 DMR_45370
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0182350 DMR_45380
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0895054 B193_0511
PD N10 unassigned family N10 unassigned peptide lyases MER0109654 nrdE DMR_44640
PE T5 unassigned family T5 unassigned peptidases MER0182329 argJ DMR_39360
SB S8 unassigned subfamily S8A unassigned peptidases MER0182318 DMR_35990
SB S8 unassigned subfamily S8A unassigned peptidases MER0972909 B193_1437
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0182174 DMR_01330
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0182244 DMR_20880
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0182274 DMR_25970
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0241317 DMR_25970
SC S9 unassigned subfamily S9A unassigned peptidases MER0993255 B193_0437
SC S9 unassigned subfamily S9C unassigned peptidases MER0182348 DMR_44780
SC S9 unassigned subfamily S9C unassigned peptidases MER1301353
SC S9 unassigned family S9 unassigned peptidases MER0182254 DMR_22300
SC S9 unassigned family S9 unassigned peptidases MER0210273 DMR_24180
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0182238 DMR_19510
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0182290 DMR_28880
SC S33 unassigned family S33 unassigned peptidases MER0182207 DMR_10710
SC S33 unassigned family S33 unassigned peptidases MER0182219 metX DMR_15680
SC S33 unassigned family S33 unassigned peptidases MER0182223 DMR_16210
SC S33 unassigned family S33 unassigned peptidases MER0182260 DMR_23400
SC S33 unassigned family S33 unassigned peptidases MER0182341 pip DMR_43160
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0182180 DMR_02500
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0182236 DMR_19280
SE S11 unassigned family S11 unassigned peptidases MER0984710 B193_1256
SE S11 unassigned family S11 unassigned peptidases MER0949057 B193_3068
SE S12 S12.006 class C beta-lactamase MER0182221 DMR_15930
SF S24 S24.003 UmuD protein MER0182291 umuD DMR_28940
SF S24 unassigned family S24 unassigned peptidases MER0182176 DMR_01850
SF S24 unassigned family S24 unassigned peptidases MER0182215 DMR_14470
SF S24 unassigned family S24 unassigned peptidases MER0182262 DMR_23580
SF S24 unassigned family S24 unassigned peptidases MER0182312 DMR_33970
SF S24 unassigned family S24 unassigned peptidases MER1044797 B193_2974
SF S24 unassigned family S24 unassigned peptidases MER1331430
SF S24 unassigned family S24 unassigned peptidases MER1330446
SF S26 S26.025 signal peptidase sipX MER0182330 DMR_39450
SF S26 unassigned subfamily S26A unassigned peptidases MER0182188 DMR_04680
SJ S16 S16.001 Lon-A peptidase MER0182285 lon DMR_28150
SJ S16 S16.001 Lon-A peptidase MER0182346 lon DMR_44650
SJ S16 S16.004 Lon peptidase (type 4) MER0351158
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0182248 radA DMR_21180
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0182319 DMR_36110
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0182328 comM DMR_39060
SJ S16 unassigned family S16 unassigned peptidases MER0182209 DMR_10810
SJ S16 unassigned family S16 unassigned peptidases MER0182353 DMR_45830
SJ S16 unassigned family S16 unassigned peptidases MER0357454
SK S14 S14.001 peptidase Clp (type 1) MER0182286 clpP DMR_28170
SK S14 unassigned family S14 unassigned peptidases MER1320282
SK S41 S41.004 C-terminal processing peptidase-3 MER0182231 ctpA DMR_17680
SK S49 unassigned subfamily S49B unassigned peptidases MER0182170 DMR_00090
SK S49 unassigned subfamily S49B unassigned peptidases MER0182342 sppA DMR_43180
SK S49 unassigned subfamily S49C unassigned peptidases MER1073099 B193_1761
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0182263 DMR_23600
ST S54 unassigned family S54 unassigned peptidases MER0182240 DMR_19850
U- U32 unassigned family U32 unassigned peptidases MER0182228 DMR_16820
U- U32 unassigned family U32 unassigned peptidases MER0182314 DMR_34750
U- U56 U56.001 homomultimeric peptidase MER0182229 DMR_17160

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from genus Desulfovibrio
Family Comment
C1 significant presence (1 homologues)
C13 significant presence (1 homologues)
C59 significant presence (3 homologues)
M1 significant presence (2 homologues)
M10 significant presence (1 homologues)
N10 significant presence (1 homologues)
S9 lineage specific expansion (9 homologues)
S11 lineage specific expansion (4 homologues)
S33 lineage specific expansion (7 homologues)