Treponema primitia

Taxonomy
Taxonomy database identifier: 88058
Superkingdom Bacteria
Phylum Spirochaetes
Order Spirochaetales
Family Spirochaetaceae
Genus Treponema
Species primitia
Peptidase View peptidase sequences from Treponema primitia
Count of known and putative peptidases: 97, non-peptidase homologues 26
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0348776 lspA
AD A24 unassigned subfamily A24A unassigned peptidases MER0248514 TREPR_1398
AD A24 unassigned subfamily A24A unassigned peptidases MER0426813
AF A26 unassigned family A26 unassigned peptidases MER0249857 TREPR_2348
AF A26 unassigned family A26 unassigned peptidases MER0195690
CA C10 unassigned family C10 unassigned peptidases MER0247868 TREPR_2216
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0248851 TREPR_0937
CO C40 C40.006 PgpA peptidase MER0249452 TREPR_3434
CO C40 C40.006 PgpA peptidase MER0377726
CO C40 unassigned family C40 unassigned peptidases MER0453661
CO C40 unassigned family C40 unassigned peptidases MER0453662
MA M3 unassigned subfamily M3B unassigned peptidases MER0248409 pepF TREPR_1459
MA M3 unassigned subfamily M3B unassigned peptidases MER0249232 TREPR_0613
MA M3 unassigned subfamily M3B unassigned peptidases MER0342785
MA M3 unassigned subfamily M3B unassigned peptidases MER0291469
MA M30 unassigned family M30 unassigned peptidases MER0248447 TREPR_0071
MA M30 unassigned family M30 unassigned peptidases MER0294617
MA M41 unassigned family M41 unassigned peptidases MER0248483 ftsH TREPR_0049
MA M41 unassigned family M41 unassigned peptidases MER0250038 ftsH TREPR_1201
MA M41 unassigned family M41 unassigned peptidases MER0363370
MA M41 unassigned family M41 unassigned peptidases MER0362356
MA M48 unassigned family M48 unassigned peptidases MER0249960 TREPR_3769
MA M48 unassigned family M48 unassigned peptidases MER0248672 TREPR_0299
MA M78 unassigned family M78 unassigned peptidases MER0910410 TREPR_2738
MD M15 unassigned subfamily M15B unassigned peptidases MER0247636 TREPR_1572
MD M15 unassigned subfamily M15B unassigned peptidases MER0469447
MD M15 unassigned subfamily M15C unassigned peptidases MER0248384 TREPR_0114
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0470595
ME M16 unassigned subfamily M16B unassigned peptidases MER0248528 TREPR_0371
ME M16 unassigned subfamily M16B unassigned peptidases MER0392464
ME M16 unassigned subfamily M16C unassigned peptidases MER0316429
ME M16 unassigned family M16 unassigned peptidases MER0248686 TREPR_1016
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0250073 TREPR_3712
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0248928 TREPR_1783
MG M24 non-peptidase homologue subfamily M24B non-peptidase homologues MER0247793 TREPR_0473
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0484073
MG M24 unassigned subfamily M24A unassigned peptidases MER0250010 map TREPR_1219
MG M24 unassigned subfamily M24A unassigned peptidases MER0395411
MG M24 unassigned subfamily M24B unassigned peptidases MER0248995 TREPR_1741
MG M24 unassigned subfamily M24B unassigned peptidases MER0247985 TREPR_1107
MG M24 unassigned subfamily M24B unassigned peptidases MER0248849 TREPR_0939
MG M24 unassigned subfamily M24B unassigned peptidases MER0484072
MG M24 unassigned subfamily M24B unassigned peptidases MER0396562
MH M18 unassigned family M18 unassigned peptidases MER0248936 TREPR_2816
MH M18 unassigned family M18 unassigned peptidases MER0247683 TREPR_0829
MH M18 unassigned family M18 unassigned peptidases MER0341163
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0249290 TREPR_3832
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0249863 TREPR_2343
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0249303 TREPR_1299
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0249346 TREPR_1284
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0474758
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374949
MH M20 unassigned subfamily M20B unassigned peptidases MER0247720 pepT TREPR_0173
MH M20 unassigned subfamily M20B unassigned peptidases MER0370683
MH M20 unassigned family M20D unassigned peptidases MER0249619 TREPR_3349
MH M20 unassigned family M20D unassigned peptidases MER0249914 TREPR_2331
MH M20 unassigned family M20D unassigned peptidases MER0247681 TREPR_0831
MH M20 unassigned family M20D unassigned peptidases MER0373334
MH M20 unassigned family M20 unassigned peptidases MER0248000 TREPR_3022
MH M20 unassigned family M20 unassigned peptidases MER0249882 TREPR_0561
MH M20 unassigned family M20 unassigned peptidases MER0247920 TREPR_0424
MH M20 unassigned family M20 unassigned peptidases MER0474529
MH M20 unassigned family M20 unassigned peptidases MER0369441
MH M42 unassigned family M42 unassigned peptidases MER0249120 TREPR_2427
MH M42 unassigned family M42 unassigned peptidases MER0249153 TREPR_2426
MH M42 unassigned family M42 unassigned peptidases MER0249006 TREPR_0709
MH M42 unassigned family M42 unassigned peptidases MER0364293
MJ M19 unassigned family M19 unassigned peptidases MER0341511 TREPR_1781
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872102 pyrC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0247918 hydA TREPR_0426
MM M50 unassigned family M50 unassigned peptidases MER0898370 rseP
MO M23 M23.009 Mername-AA292 peptidase MER0388281
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0249014 TREPR_2470
MO M23 unassigned subfamily M23B unassigned peptidases MER0248024 TREPR_3007
MO M23 unassigned subfamily M23B unassigned peptidases MER0247873 TREPR_2211
MO M23 unassigned subfamily M23B unassigned peptidases MER0247615 TREPR_1579
MO M23 unassigned subfamily M23B unassigned peptidases MER0248714 TREPR_0999
MO M23 unassigned subfamily M23B unassigned peptidases MER0248451 TREPR_0714
MO M23 unassigned subfamily M23B unassigned peptidases MER0387947
MO M23 unassigned subfamily M23B unassigned peptidases MER0388301
MP M67 unassigned subfamily M67B unassigned peptidases MER0905613 TREPR_3714
MP M67 unassigned subfamily M67B unassigned peptidases MER0249831 TREPR_0258
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0346154 TREPR_3021
MT M81 unassigned family M81 unassigned peptidases MER0317589 TREPR_1445
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0248852 flhB TREPR_2850
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327355
PA S1 S01.454 bhpA peptidase (spirochaete) MER0250054 TREPR_1199
PA S1 unassigned subfamily S1C unassigned peptidases MER0248361 TREPR_0130
PA S1 unassigned subfamily S1C unassigned peptidases MER0250009 TREPR_1220
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0249933 purF TREPR_3786
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0305739
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0248787 gltB TREPR_3466
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0460183
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0247979 glmS TREPR_1116
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456958
PB C44 unassigned family C44 unassigned peptidases MER0458359 asnB TREPR_0340
PB C45 non-peptidase homologue family C45 non-peptidase homologues MER0725556 TREPR_0474
PB T1 T01.006 HslV component of HslUV peptidase MER0248277 hslV TREPR_2563
PB T1 T01.006 HslV component of HslUV peptidase MER0323702
PC C26 C26.952 dihydro-orotase (N-terminal unit) (Homo sapiens-type) MER0440336
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0248510 TREPR_0383
PC C26 C26.959 TRP3 protein MER0438500
PC C26 C26.964 CTP synthetase MER0447284 pyrG TREPR_3014
PC C26 C26.964 CTP synthetase MER0447137 pyrG
PC C26 C26.A28 SPBPB2B2.05 (Schizosaccharomyces pombe) MER0249348 TREPR_1281
PC C26 unassigned family C26 unassigned peptidases MER0444574 TREPR_0218
PC C26 unassigned family C26 unassigned peptidases MER0444706 hisH TREPR_3208
PC C26 unassigned family C26 unassigned peptidases MER0248791 TREPR_2881
PC C26 unassigned family C26 unassigned peptidases MER0448415
PC C26 unassigned family C26 unassigned peptidases MER0444964 guaA
PC C26 unassigned family C26 unassigned peptidases MER0445102
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385489 TREPR_2765
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385488
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0247786 TREPR_0144
SB S8 unassigned subfamily S8A unassigned peptidases MER0250092 TREPR_3698
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0248043
SC S33 unassigned family S33 unassigned peptidases MER0249256 TREPR_1321
SC S33 unassigned family S33 unassigned peptidases MER0248529 TREPR_0369
SE S11 unassigned family S11 unassigned peptidases MER0247869 TREPR_2214
SE S11 unassigned family S11 unassigned peptidases MER0351291
SF S24 S24.001 repressor LexA MER0249043 lexA TREPR_0683
SF S24 S24.001 repressor LexA MER0304557
SF S24 unassigned family S24 unassigned peptidases MER0250098 TREPR_3691
SF S24 unassigned family S24 unassigned peptidases MER0247520 TREPR_3112
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1048977 lepB_2
SF S26 unassigned subfamily S26A unassigned peptidases MER0248452 lepB_1 TREPR_2488
SF S26 unassigned subfamily S26A unassigned peptidases MER0247896 lepB_3 TREPR_2210
SF S26 unassigned subfamily S26A unassigned peptidases MER0333485
SH S78 unassigned family S78 unassigned peptidases MER0248626 TREPR_2082
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0248190 radA TREPR_3200
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0472154
SJ S16 unassigned family S16 unassigned peptidases MER0249958 lon_1 TREPR_3771
SJ S16 unassigned family S16 unassigned peptidases MER0247671 lon_2 TREPR_2601
SJ S16 unassigned family S16 unassigned peptidases MER0360893
SJ S16 unassigned family S16 unassigned peptidases MER0361210
SK S14 S14.001 peptidase Clp (type 1) MER0247684 clpP/clpP_1 TREPR_2599
SK S14 unassigned family S14 unassigned peptidases MER0247499 clpP_2 TREPR_1951
SK S14 unassigned family S14 unassigned peptidases MER0359385
SK S41 S41.004 C-terminal processing peptidase-3 MER0248461 TREPR_0060
SK S41 S41.004 C-terminal processing peptidase-3 MER0337488
SK S49 unassigned subfamily S49C unassigned peptidases MER1071840 TREPR_0757
ST S54 unassigned family S54 unassigned peptidases MER1075367 TREPR_0455
ST S54 unassigned family S54 unassigned peptidases MER0248954 TREPR_2810
U- U32 U32.003 collagenase (Salmonella-type) MER0248366 TREPR_0123
U- U32 unassigned family U32 unassigned peptidases MER0403591

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from genus Treponema
Family Comment
C10 significant presence (1 homologues)
C26 lineage specific expansion (12 homologues)
C44 lineage specific expansion (7 homologues)
C45 significant presence (1 homologues)
M20 lineage specific expansion (17 homologues)
M23 lineage specific expansion (9 homologues)
M24 lineage specific expansion (11 homologues)
M41 lineage specific expansion (4 homologues)
M42 significant presence (4 homologues)
M67 significant presence (2 homologues)
P1 significant presence (1 homologues)
S78 significant presence (1 homologues)