Structure for peptidase S45.001: penicillin G acylase precursor

Summary Alignment Tree Sequences Sequence features Distribution Structure Literature Substrates

 

PDB Organism Resolution Comment
1PNK Escherichia coli 1.90 Å complex with calcium
The active enzyme is shown. The structural calcium ions are shown as yellow CPK spheres. The catalytic Ser290 of the B-chain is shown in ball-and-stick representation in orange.
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TERTIARY STRUCTURE DATA
Comment Resolution PDB PDBe SCOP CATH PDBSum Proteopedia Reference
Alcaligenes faecalis
thermostable penicillin g acylase from alcaligenes faecalis in orthorhombic form 3.31 Å 3K3W 3K3W 3K3W 3K3W 3K3W 3K3W
thermostable penicillin g acylase from alcaligenes faecalis in tetragonal form 3.50 Å 3ML0 3ML0 3ML0 3ML0 3ML0 3ML0
Bacillus megaterium
crystal structure of penicillin g acylase from bacillus megaterium 2.20 Å 6NVW 6NVW 6NVW 6NVW 6NVW 6NVW
Escherichia coli
complex with 3,4-dihydroxyphenylacetic acid 2.35 Å 1AI4 1AI4 1AI4 1AI4 1AI4 1AI4 Done et al., 1998
complex with m-nitrophenylacetic acid 2.36 Å 1AI5 1AI5 1AI5 1AI5 1AI5 1AI5 Done et al., 1998
complex with p-hydroxyphenylacetic acid 2.55 Å 1AI6 1AI6 1AI6 1AI6 1AI6 1AI6 Done et al., 1998
complex with phenol 2.50 Å 1AI7 1AI7 1AI7 1AI7 1AI7 1AI7 Done et al., 1998
complex with p-nitrophenylacetic acid 2.36 Å 1AJN 1AJN 1AJN 1AJN 1AJN 1AJN Done et al., 1998
complex with 2,5-dihydroxyphenylacetic acid 2.31 Å 1AJP 1AJP 1AJP 1AJP 1AJP 1AJP Done et al., 1998
complex with thiopheneacetic acid 2.05 Å 1AJQ 1AJQ 1AJQ 1AJQ 1AJQ 1AJQ Done et al., 1998
slow processing precursor 1.80 Å 1E3A 1E3A 1E3A 1E3A 1E3A 1E3A Hewitt et al., 2000
mutant; complex with phenylacetic acid 1.97 Å 1FXH 1FXH 1FXH 1FXH 1FXH 1FXH Alkema et al., 2000
mutant; complex with penicillin G 2.25 Å 1FXV 1FXV 1FXV 1FXV 1FXV 1FXV Alkema et al., 2000
complex with substrate 1.30 Å 1GK9 1GK9 1GK9 1GK9 1GK9 1GK9 McVey et al., 2001
complex with substrate 1.41 Å 1GKF 1GKF 1GKF 1GKF 1GKF 1GKF McVey et al., 2001
complex with substrate 1.45 Å 1GM7 1GM7 1GM7 1GM7 1GM7 1GM7 McVey et al., 2001
complex with substrate 2.00 Å 1GM8 1GM8 1GM8 1GM8 1GM8 1GM8 McVey et al., 2001
complex with substrate 1.80 Å 1GM9 1GM9 1GM9 1GM9 1GM9 1GM9 McVey et al., 2001
altered substrate specificity mutant of penicillin acylase 2.00 Å 1H2G 1H2G 1H2G 1H2G 1H2G 1H2G Morillas et al., 2003
penicillin acylase, mutant 2.28 Å 1JX9 1JX9 1JX9 1JX9 1JX9 1JX9 Alkema et al., 2004
penicillin acylase, mutant complexed with paa 2.34 Å 1K5Q 1K5Q 1K5Q 1K5Q 1K5Q 1K5Q Alkema et al., 2004
penicillin acylase, mutant complexed with ppa 2.43 Å 1K5S 1K5S 1K5S 1K5S 1K5S 1K5S Alkema et al., 2004
penicillin acylase mutant with phenyl proprionic acid 2.15 Å 1K7D 1K7D 1K7D 1K7D 1K7D 1K7D Alkema et al., 2004
mutant; complex with phenyl proprionic acid 2.30 Å 1KEC 1KEC 1KEC 1KEC 1KEC 1KEC Alkema et al., 2004
complex with calcium 1.90 Å 1PNK 1PNK 1PNK 1PNK 1PNK 1PNK Duggleby et al., 1995
complex with 2-phenylacetic acid and calcium 2.50 Å 1PNL 1PNL 1PNL 1PNL 1PNL 1PNL Duggleby et al., 1995
complex with benzylsulfinic acid and calcium 2.50 Å 1PNM 1PNM 1PNM 1PNM 1PNM 1PNM Duggleby et al., 1995
Kluyvera citrophila
mature  peptidase 2.80 Å 4PEL 4PEL 4PEL 4PEL 4PEL 4PEL
Providencia rettgeri
mature  peptidase 2.50 Å 1CP9 1CP9 1CP9 1CP9 1CP9 1CP9 McDonough et al., 1999